Displaying data sets 63501 - 63600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G01860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.733 x 10-3 134 111 54.69% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7166 x 10-2 183 94 55 32 66.06% 36.78% 277 87 TAIR8 Avg. embryo expression (dissected): '63.3217'
Avg. embryo expression (LCM): '70.4034'
AT4G01860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 86 15 51 47 85.15% 47.96% 101 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.2216'
Avg. expression score in LCM sample: '17.0202'
Tissue used: 'full endosperm'
AT4G01860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 49 16 20 24 75.38% 54.55% 65 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.1399'
Avg. expression score in LCM sample: '17.0202'
Tissue used: 'pure endosperm, no chalazal'
AT4G01850 SAM-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.36088 x 10-1 262 114 148 351 69.68% 70.34% 376 499 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001416'
Avg. expression score for this sample: '413.291'
Avg. expression score in LCM sample: '225.745'
Tissue used: 'pure endosperm, no chalazal'
AT4G01850 SAM-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.83999 x 10-1 345 428 120 162 44.63% 57.45% 773 282 TAIR8 Avg. embryo expression (dissected): '781.62'
Avg. embryo expression (LCM): '600.74'
AT4G01850 SAM-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4154 x 10-2 279 77 78.37% 356 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01850 SAM-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.93 x 10-3 238 82 91 268 74.38% 74.65% 320 359 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001416'
Avg. expression score for this sample: '308.027'
Avg. expression score in LCM sample: '225.745'
Tissue used: 'full endosperm'
AT4G01850 SAM-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-6 346 71 82.97% 417 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01850 SAM-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1537 x 10-2 111 61 64.53% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01840 KCO5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.59094 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'MEG affected by fie'
AT4G01840 KCO5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.80615 x 10-1 77 1 98.72% 78 TAIR8 Mutant effect: 'MEG affected by fie'
AT4G01840 KCO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 1.1 x 10-11 71 1 3 61 98.61% 95.31% 72 64 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '4.5e-12'
Avg. expression score for this sample: '41.4017'
Avg. expression score in LCM sample: '12.1405'
Tissue used: 'full endosperm'
AT4G01840 KCO5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38262 x 10-1 21 13 9 5 61.76% 35.71% 34 14 TAIR8 Avg. embryo expression (dissected): '33.7524'
Avg. embryo expression (LCM): '25.5441'
AT4G01840 KCO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 4.5103 x 10-2 25 2 2 7 92.59% 77.78% 27 9 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '4.5e-12'
Avg. expression score for this sample: '18.8449'
Avg. expression score in LCM sample: '12.1405'
Tissue used: 'pure endosperm, no chalazal'
AT4G01840 KCO5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-11 74 40 64.91% 114 TAIR8 Mutant effect: 'MEG affected by fie'
AT4G01830 ABCB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01830 ABCB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.359881'
Avg. embryo expression (LCM): '0'
AT4G01830 ABCB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.918641'
Avg. expression score in LCM sample: '.396844'
Tissue used: 'full endosperm'
AT4G01830 ABCB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.03289'
Avg. expression score in LCM sample: '.396844'
Tissue used: 'pure endosperm, no chalazal'
AT4G01830 ABCB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01830 ABCB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01820 ABCB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01820 ABCB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01820 ABCB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.488989'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01820 ABCB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G01820 ABCB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01820 ABCB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.340499'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3423 x 10-1 197 51 107 138 79.44% 56.33% 248 245 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.952179'
Avg. expression score for this sample: '116.836'
Avg. expression score in LCM sample: '100.975'
Tissue used: 'full endosperm'
AT4G01810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.6542 x 10-1 50 21 22 10 70.42% 31.25% 71 32 TAIR8 Avg. embryo expression (dissected): '93.0281'
Avg. embryo expression (LCM): '86.2774'
AT4G01810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6947 x 10-1 47 18 34 32 72.31% 48.48% 65 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.952179'
Avg. expression score for this sample: '103.303'
Avg. expression score in LCM sample: '100.975'
Tissue used: 'pure endosperm, no chalazal'
AT4G01810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.12408 x 10-1 151 64 70.23% 215 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5 x 10-22 375 36 91.24% 411 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.6973 x 10-2 15 15 50.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01800 AGY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.71261 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01800 AGY1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-5 183 38 82.81% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01800 AGY1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8 x 10-5 164 33 83.25% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01800 AGY1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.8342 x 10-1 141 154 35 42 47.80% 54.55% 295 77 TAIR8 Avg. embryo expression (dissected): '542.294'
Avg. embryo expression (LCM): '257.89'
AT4G01800 AGY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2077 x 10-2 195 55 118 253 78.00% 68.19% 250 371 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177683'
Avg. expression score for this sample: '220.931'
Avg. expression score in LCM sample: '77.7079'
Tissue used: 'full endosperm'
AT4G01800 AGY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.63416 x 10-1 89 46 40 63 65.93% 61.17% 135 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177683'
Avg. expression score for this sample: '260.518'
Avg. expression score in LCM sample: '77.7079'
Tissue used: 'pure endosperm, no chalazal'
AT4G01790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.03373 x 10-1 4 5 5 4 44.44% 44.44% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.646831'
Avg. expression score for this sample: '6.78368'
Avg. expression score in LCM sample: '4.82092'
Tissue used: 'pure endosperm, no chalazal'
AT4G01790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 7 10 2 2 41.18% 50.00% 17 4 TAIR8 Avg. embryo expression (dissected): '12.3093'
Avg. embryo expression (LCM): '55.6847'
AT4G01790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0913 x 10-1 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 22 6 19 29 78.57% 60.42% 28 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.646831'
Avg. expression score for this sample: '18.1527'
Avg. expression score in LCM sample: '4.82092'
Tissue used: 'full endosperm'
AT4G01790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.864 x 10-3 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.30965 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.48473 x 10-1 18 3 6 11 85.71% 64.71% 21 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '135.849'
Avg. expression score in LCM sample: '20.4595'
Tissue used: 'full endosperm'
AT4G01780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '267.954'
Avg. embryo expression (LCM): '105.806'
AT4G01780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 6 1 11 50.00% 91.67% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '140.23'
Avg. expression score in LCM sample: '20.4595'
Tissue used: 'pure endosperm, no chalazal'
AT4G01780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01770 RGXT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01770 RGXT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G01770 RGXT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.487019'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'full endosperm'
AT4G01770 RGXT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'pure endosperm, no chalazal'
AT4G01770 RGXT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01770 RGXT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.16847'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G01760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.430974'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01750 RGXT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 1 4 1 90.91% 20.00% 11 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.77603'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01750 RGXT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.387872'
Avg. embryo expression (LCM): '0'
AT4G01750 RGXT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.66348 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01750 RGXT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.135 x 10-3 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01750 RGXT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01750 RGXT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.171286'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.35156 x 10-1 17 6 13 14 73.91% 51.85% 23 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576062'
Avg. expression score for this sample: '35.5654'
Avg. expression score in LCM sample: '28.5434'
Tissue used: 'pure endosperm, no chalazal'
AT4G01740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.36594 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.51259 x 10-1 22 11 12 17 66.67% 58.62% 33 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576062'
Avg. expression score for this sample: '39.3923'
Avg. expression score in LCM sample: '28.5434'
Tissue used: 'full endosperm'
AT4G01740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 5 8 2 2 38.46% 50.00% 13 4 TAIR8 Avg. embryo expression (dissected): '17.2888'
Avg. embryo expression (LCM): '7.05792'
AT4G01740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.97213 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1124 x 10-2 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G01735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.1464'
Avg. expression score in LCM sample: '26.6032'
Tissue used: 'full endosperm'
AT4G01730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.7612'
Avg. embryo expression (LCM): '34.511'
AT4G01730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.31'
Avg. expression score in LCM sample: '26.6032'
Tissue used: 'pure endosperm, no chalazal'
AT4G01720 WRKY47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.701738'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01720 WRKY47 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01720 WRKY47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.69601'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01720 WRKY47 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.814927'
Avg. embryo expression (LCM): '1.36888'
AT4G01720 WRKY47 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01720 WRKY47 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01710 CRK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01710 CRK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01710 CRK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '30.2491'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'pure endosperm, no chalazal'
AT4G01710 CRK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '35.6334'
Avg. embryo expression (LCM): '19.7546'
AT4G01710 CRK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01710 CRK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.7609'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'full endosperm'