| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G01960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 2 | 0 | 1 | 50.00% | 100.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '268.269' Avg. expression score in LCM sample: '96.58' Tissue used: 'full endosperm' |
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| AT4G01960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01950 | GPAT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2747 x 10-2 | 23 | 2 | 92.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01950 | GPAT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.77394 x 10-1 | 77 | 23 | 65 | 133 | 77.00% | 67.17% | 100 | 198 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.490163' Avg. expression score for this sample: '136.297' Avg. expression score in LCM sample: '1.61677' Tissue used: 'full endosperm' |
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| AT4G01950 | GPAT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 24 | 15 | 17 | 37 | 61.54% | 68.52% | 39 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.490163' Avg. expression score for this sample: '67.9732' Avg. expression score in LCM sample: '1.61677' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01950 | GPAT3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 3 | 0 | 1 | 40.00% | 100.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '10.1798' Avg. embryo expression (LCM): '0' |
|||
| AT4G01950 | GPAT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.819 x 10-3 | 21 | 1 | 95.45% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01950 | GPAT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.096 x 10-3 | 19 | 25 | 43.18% | 44 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01940 | NFU1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01940 | NFU1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '710.115' Avg. expression score in LCM sample: '145.451' Tissue used: 'full endosperm' |
||||||
| AT4G01940 | NFU1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01940 | NFU1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01940 | NFU1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '822.249' Avg. embryo expression (LCM): '499.291' |
|||||
| AT4G01940 | NFU1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '564.27' Avg. expression score in LCM sample: '145.451' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01935 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.51668 x 10-1 | 48 | 20 | 10 | 36 | 70.59% | 78.26% | 68 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.060245' Avg. expression score for this sample: '384.933' Avg. expression score in LCM sample: '170.643' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G01935 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.74946 x 10-1 | 56 | 38 | 7 | 5 | 59.57% | 41.67% | 94 | 12 | TAIR8 |
Avg. embryo expression (dissected): '546.409' Avg. embryo expression (LCM): '733.76' |
||||
| AT4G01935 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-6 | 216 | 35 | 86.06% | 251 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01935 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.65091 x 10-1 | 46 | 11 | 80.70% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01935 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.709 x 10-3 | 195 | 43 | 81.93% | 238 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01935 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.24783 x 10-1 | 138 | 37 | 114 | 235 | 78.86% | 67.34% | 175 | 349 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.060245' Avg. expression score for this sample: '939.355' Avg. expression score in LCM sample: '170.643' Tissue used: 'full endosperm' |
|||||
| AT4G01930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '12.4362' Avg. expression score in LCM sample: '24.766' Tissue used: 'full endosperm' |
||||||
| AT4G01930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.7619 x 10-2 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.15183' Avg. embryo expression (LCM): '5.13646' |
||||||
| AT4G01930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '15.4014' Avg. expression score in LCM sample: '24.766' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G01930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01925 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01925 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01925 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.139623' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT4G01925 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 3 | 0 | 2 | 0.00% | 100.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.86369' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01925 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||
| AT4G01925 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.2 x 10-4 | 30 | 0 | 100.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.950667' Avg. embryo expression (LCM): '0' |
||||
| AT4G01920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 3 | 1 | 100.00% | 25.00% | 2 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.0244' Avg. expression score in LCM sample: '7.62822' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G01920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.298 x 10-3 | 0 | 8 | 0.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 10 | 0 | 5 | 0 | 100.00% | 0.00% | 10 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.5153' Avg. expression score in LCM sample: '7.62822' Tissue used: 'full endosperm' |
|||||
| AT4G01920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.913 x 10-2 | 0 | 4 | 0.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01915 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01915 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01915 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.89029' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G01915 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.32698' Avg. embryo expression (LCM): '1.11771' |
||||||
| AT4G01915 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01915 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.12743 x 10-1 | 16 | 1 | 16 | 0 | 94.12% | 0.00% | 17 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.094559' Avg. expression score for this sample: '16.4338' Avg. expression score in LCM sample: '29.1607' Tissue used: 'full endosperm' |
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| AT4G01910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.6787 x 10-1 | 22 | 0 | 19 | 0 | 100.00% | 0.00% | 22 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.094559' Avg. expression score for this sample: '19.6165' Avg. expression score in LCM sample: '29.1607' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01910 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.8 x 10-11 | 51 | 0 | 100.00% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01910 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.6008' Avg. embryo expression (LCM): '1.18051' |
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| AT4G01900 | GLB1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.0 | 1848 | 653 | 294 | 172 | 73.89% | 36.91% | 2501 | 466 | TAIR8 |
Avg. embryo expression (dissected): '1136.45' Avg. embryo expression (LCM): '1314.07' |
|||
| AT4G01900 | GLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-19 | 326 | 56 | 85.34% | 382 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01900 | GLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 x 10-8 | 204 | 206 | 49.76% | 410 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01900 | GLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.52615 x 10-1 | 959 | 289 | 458 | 611 | 76.84% | 57.16% | 1248 | 1069 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001179' Avg. expression score for this sample: '604.843' Avg. expression score in LCM sample: '292.929' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01900 | GLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.6 x 10-6 | 1480 | 451 | 1356 | 1502 | 76.64% | 52.55% | 1931 | 2858 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001179' Avg. expression score for this sample: '856.751' Avg. expression score in LCM sample: '292.929' Tissue used: 'full endosperm' |
||||
| AT4G01900 | GLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.27845 x 10-1 | 177 | 87 | 67.05% | 264 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G01897 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1453 x 10-2 | 77 | 11 | 87.50% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01897 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 9 | 11 | 6 | 26 | 45.00% | 81.25% | 20 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.067822' Avg. expression score for this sample: '27.4743' Avg. expression score in LCM sample: '21.1503' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01897 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.0189 x 10-2 | 69 | 27 | 23 | 89 | 71.88% | 79.46% | 96 | 112 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.067822' Avg. expression score for this sample: '84.6591' Avg. expression score in LCM sample: '21.1503' Tissue used: 'full endosperm' |
|||||
| AT4G01897 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.0 x 10-14 | 183 | 3 | 98.39% | 186 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01897 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.00105 x 10-1 | 2 | 13 | 4 | 7 | 13.33% | 63.64% | 15 | 11 | TAIR8 |
Avg. embryo expression (dissected): '19.6551' Avg. embryo expression (LCM): '18.0718' |
||||
| AT4G01897 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.20956 x 10-1 | 20 | 8 | 71.43% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01895 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01895 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '17.651' Avg. expression score in LCM sample: '6.96681' Tissue used: 'full endosperm' |
||||||
| AT4G01895 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.7619 x 10-2 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01895 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '13.4451' Avg. expression score in LCM sample: '6.96681' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01895 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.90407' Avg. embryo expression (LCM): '0' |
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| AT4G01895 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.7619 x 10-2 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01890 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01890 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '.891659' |
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| AT4G01890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.129142' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G01890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01883 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.2577 x 10-1 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01883 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.99184 x 10-1 | 12 | 7 | 11 | 32 | 63.16% | 74.42% | 19 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.731114' Avg. expression score for this sample: '22.4369' Avg. expression score in LCM sample: '3.89495' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01883 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.87344 x 10-1 | 27 | 10 | 26 | 50 | 72.97% | 65.79% | 37 | 76 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.731114' Avg. expression score for this sample: '35.6585' Avg. expression score in LCM sample: '3.89495' Tissue used: 'full endosperm' |
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| AT4G01883 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.91286' Avg. embryo expression (LCM): '1.10515' |
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| AT4G01883 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-5 | 29 | 0 | 100.00% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01883 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.80951 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.75188 x 10-1 | 15 | 9 | 6 | 23 | 62.50% | 79.31% | 24 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.477511' Avg. expression score for this sample: '106.648' Avg. expression score in LCM sample: '65.3469' Tissue used: 'full endosperm' |
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| AT4G01880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.22156 x 10-1 | 30 | 5 | 85.71% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.13633 x 10-1 | 8 | 4 | 1 | 10 | 66.67% | 90.91% | 12 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.477511' Avg. expression score for this sample: '108.976' Avg. expression score in LCM sample: '65.3469' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01880 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.237 x 10-3 | 33 | 1 | 97.06% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01880 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 1 | 3 | 50.00% | 75.00% | 20 | 4 | TAIR8 |
Avg. embryo expression (dissected): '95.3576' Avg. embryo expression (LCM): '131.664' |
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| AT4G01870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.6382 x 10-1 | 18 | 32 | 3 | 7 | 36.00% | 70.00% | 50 | 10 | TAIR8 |
Avg. embryo expression (dissected): '191.043' Avg. embryo expression (LCM): '35.7919' |
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| AT4G01870 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1988 | 43 | 97.88% | 2031 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.03973 x 10-1 | 10 | 1 | 90.91% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 15 | 16 | 2 | 19 | 48.39% | 90.48% | 31 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.643728' Avg. expression score for this sample: '113.341' Avg. expression score in LCM sample: '14.9037' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.79361 x 10-1 | 58 | 27 | 47 | 75 | 68.24% | 61.48% | 85 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.643728' Avg. expression score for this sample: '277.145' Avg. expression score in LCM sample: '14.9037' Tissue used: 'full endosperm' |
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| AT4G01870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-28 | 225 | 1 | 99.56% | 226 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01865 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01865 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G01865 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G01865 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01865 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT4G01865 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G01860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.4477 x 10-2 | 14 | 15 | 48.28% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G01860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 86 | 15 | 51 | 47 | 85.15% | 47.96% | 101 | 98 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.2216' Avg. expression score in LCM sample: '17.0202' Tissue used: 'full endosperm' |