Displaying data sets 63301 - 63400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G02080 SAR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02080 SAR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02080 SAR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02080 SAR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '510.28'
Avg. expression score in LCM sample: '211.812'
Tissue used: 'full endosperm'
AT4G02080 SAR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '292.354'
Avg. expression score in LCM sample: '211.812'
Tissue used: 'pure endosperm, no chalazal'
AT4G02080 SAR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '219.855'
Avg. embryo expression (LCM): '172.693'
AT4G02075 PIT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '3.80991'
Avg. embryo expression (LCM): '2.96382'
AT4G02075 PIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2 x 10-5 23 3 0 38 88.46% 100.00% 26 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '21.8367'
Avg. expression score in LCM sample: '1.73435'
Tissue used: 'full endosperm'
AT4G02075 PIT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02075 PIT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000016'
Avg. expression score for this sample: '1.22397'
Avg. expression score in LCM sample: '1.73435'
Tissue used: 'pure endosperm, no chalazal'
AT4G02075 PIT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02075 PIT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02070 MSH6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.206 x 10-3 71 59 54.62% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02070 MSH6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3 x 10-20 734 128 85.15% 862 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02070 MSH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9987 x 10-2 413 101 235 418 80.35% 64.01% 514 653 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170662'
Avg. expression score for this sample: '212.682'
Avg. expression score in LCM sample: '108.177'
Tissue used: 'full endosperm'
AT4G02070 MSH6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.36345 x 10-1 306 219 106 77 58.29% 42.08% 525 183 TAIR8 Avg. embryo expression (dissected): '377.757'
Avg. embryo expression (LCM): '426.879'
AT4G02070 MSH6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5 x 10-17 345 341 50.29% 686 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02070 MSH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.54408 x 10-1 180 88 95 140 67.16% 59.57% 268 235 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170662'
Avg. expression score for this sample: '174.141'
Avg. expression score in LCM sample: '108.177'
Tissue used: 'pure endosperm, no chalazal'
AT4G02060 PRL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.52675 x 10-1 113 79 69 122 58.85% 63.87% 192 191 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180314'
Avg. expression score for this sample: '66.0939'
Avg. expression score in LCM sample: '51.2222'
Tissue used: 'pure endosperm, no chalazal'
AT4G02060 PRL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.00138 x 10-1 267 149 64.18% 416 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02060 PRL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.05714 x 10-1 48 17 73.85% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02060 PRL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.33 x 10-4 298 108 73.40% 406 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02060 PRL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.02662 x 10-1 65 24 109 184 73.03% 62.80% 89 293 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180314'
Avg. expression score for this sample: '48.6244'
Avg. expression score in LCM sample: '51.2222'
Tissue used: 'full endosperm'
AT4G02060 PRL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.45601 x 10-1 343 429 89 131 44.43% 59.55% 772 220 TAIR8 Avg. embryo expression (dissected): '273.379'
Avg. embryo expression (LCM): '270.575'
AT4G02055 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G02055 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02055 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G02055 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G02055 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02055 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02050 STP7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02050 STP7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02050 STP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '255.284'
Avg. expression score in LCM sample: '80.9855'
Tissue used: 'full endosperm'
AT4G02050 STP7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '136.814'
Avg. embryo expression (LCM): '55.3582'
AT4G02050 STP7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02050 STP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '120.475'
Avg. expression score in LCM sample: '80.9855'
Tissue used: 'pure endosperm, no chalazal'
AT4G02040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.424183'
Avg. expression score for this sample: '6.59744'
Avg. expression score in LCM sample: '5.36474'
Tissue used: 'pure endosperm, no chalazal'
AT4G02040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1057 x 10-2 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.18589 x 10-1 5 12 29.41% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.77234 x 10-1 8 4 8 7 66.67% 46.67% 12 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.424183'
Avg. expression score for this sample: '17.3748'
Avg. expression score in LCM sample: '5.36474'
Tissue used: 'full endosperm'
AT4G02040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '12.9889'
Avg. embryo expression (LCM): '6.10347'
AT4G02030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.23036 x 10-1 11 12 6 10 47.83% 62.50% 23 16 TAIR8 Avg. embryo expression (dissected): '32.627'
Avg. embryo expression (LCM): '26.5739'
AT4G02030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44874 x 10-1 118 46 71.95% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.59695 x 10-1 42 21 37 90 66.67% 70.87% 63 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848711'
Avg. expression score for this sample: '51.2258'
Avg. expression score in LCM sample: '27.6468'
Tissue used: 'full endosperm'
AT4G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.48369 x 10-1 14 12 10 24 53.85% 70.59% 26 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848711'
Avg. expression score for this sample: '26.455'
Avg. expression score in LCM sample: '27.6468'
Tissue used: 'pure endosperm, no chalazal'
AT4G02030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-12 157 8 95.15% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.34512 x 10-1 26 7 78.79% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02020 SWN endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.89155 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02020 SWN endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-11 188 23 89.10% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02020 SWN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.80201 x 10-1 156 89 84 227 63.67% 72.99% 245 311 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87525'
Avg. expression score for this sample: '326.065'
Avg. expression score in LCM sample: '99.7401'
Tissue used: 'full endosperm'
AT4G02020 SWN embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.8099 x 10-2 10 36 9 8 21.74% 47.06% 46 17 TAIR8 Avg. embryo expression (dissected): '88.1566'
Avg. embryo expression (LCM): '46.1277'
AT4G02020 SWN endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-11 167 18 90.27% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02020 SWN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.68499 x 10-1 82 44 54 88 65.08% 61.97% 126 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87525'
Avg. expression score for this sample: '255.098'
Avg. expression score in LCM sample: '99.7401'
Tissue used: 'pure endosperm, no chalazal'
AT4G02010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.55643 x 10-1 3 8 3 10 27.27% 76.92% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '222.179'
Avg. expression score in LCM sample: '138.102'
Tissue used: 'pure endosperm, no chalazal'
AT4G02010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4174 x 10-2 31 5 86.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.761 x 10-3 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7947 x 10-1 36 26 10 45 58.06% 81.82% 62 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '267.976'
Avg. expression score in LCM sample: '138.102'
Tissue used: 'full endosperm'
AT4G02010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 11 2 4 38.89% 66.67% 18 6 TAIR8 Avg. embryo expression (dissected): '264.057'
Avg. embryo expression (LCM): '222.576'
AT4G02005 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '47.6222'
Avg. embryo expression (LCM): '25.8958'
AT4G02005 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 3 100.00% 75.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '141.276'
Avg. expression score in LCM sample: '13.9924'
Tissue used: 'full endosperm'
AT4G02005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.5661'
Avg. expression score in LCM sample: '13.9924'
Tissue used: 'pure endosperm, no chalazal'
AT4G02005 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02005 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01 x 10-4 29 1 96.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.82407 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.87355 x 10-1 26 12 9 6 68.42% 40.00% 38 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.412338'
Avg. expression score for this sample: '17.133'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'full endosperm'
AT4G02000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 9 4 2 4 69.23% 66.67% 13 6 TAIR8 Avg. embryo expression (dissected): '13.8043'
Avg. embryo expression (LCM): '18.4109'
AT4G02000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.22 x 10-3 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68813 x 10-1 4 0 10 11 100.00% 52.38% 4 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.412338'
Avg. expression score for this sample: '8.87669'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'pure endosperm, no chalazal'
AT4G01995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.532'
Avg. expression score in LCM sample: '6.23192'
Tissue used: 'pure endosperm, no chalazal'
AT4G01995 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01995 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01995 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '32.5552'
Avg. expression score in LCM sample: '6.23192'
Tissue used: 'full endosperm'
AT4G01995 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '63.8247'
Avg. embryo expression (LCM): '53.2735'
AT4G01990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '42.4069'
Avg. embryo expression (LCM): '62.1147'
AT4G01990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.7971'
Avg. expression score in LCM sample: '14.1835'
Tissue used: 'full endosperm'
AT4G01990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.1181'
Avg. expression score in LCM sample: '14.1835'
Tissue used: 'pure endosperm, no chalazal'
AT4G01990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01985 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01985 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.35114'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01985 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.12046'
Avg. embryo expression (LCM): '0'
AT4G01985 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.55986'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01970 STS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011281'
Avg. expression score for this sample: '18.1727'
Avg. expression score in LCM sample: '8.30432'
Tissue used: 'pure endosperm, no chalazal'
AT4G01970 STS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01970 STS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01970 STS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01970 STS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2609 x 10-2 9 1 0 14 90.00% 100.00% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011281'
Avg. expression score for this sample: '82.3901'
Avg. expression score in LCM sample: '8.30432'
Tissue used: 'full endosperm'
AT4G01970 STS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.54361'
Avg. embryo expression (LCM): '0'
AT4G01960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '230.934'
Avg. embryo expression (LCM): '221.119'
AT4G01960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '268.269'
Avg. expression score in LCM sample: '96.58'
Tissue used: 'full endosperm'
AT4G01960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '112.647'
Avg. expression score in LCM sample: '96.58'
Tissue used: 'pure endosperm, no chalazal'