Displaying data sets 63001 - 63100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G02520 GSTF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02520 GSTF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02520 GSTF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.189'
Avg. expression score in LCM sample: '4.46817'
Tissue used: 'full endosperm'
AT4G02520 GSTF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.7763'
Avg. expression score in LCM sample: '4.46817'
Tissue used: 'pure endosperm, no chalazal'
AT4G02520 GSTF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.4506'
Avg. embryo expression (LCM): '1.26842'
AT4G02520 GSTF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02510 TOC159 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-8 465 112 80.59% 577 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02510 TOC159 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1593 x 10-2 395 500 109 104 44.13% 48.83% 895 213 TAIR8 Avg. embryo expression (dissected): '5675.12'
Avg. embryo expression (LCM): '3036.79'
AT4G02510 TOC159 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1483 x 10-1 238 168 115 269 58.62% 70.05% 406 384 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208185'
Avg. expression score for this sample: '3092.03'
Avg. expression score in LCM sample: '1095.99'
Tissue used: 'pure endosperm, no chalazal'
AT4G02510 TOC159 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-16 645 125 83.77% 770 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02510 TOC159 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4531 x 10-2 78 20 79.59% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02510 TOC159 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.123 x 10-2 298 147 190 549 66.97% 74.29% 445 739 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208185'
Avg. expression score for this sample: '2645.96'
Avg. expression score in LCM sample: '1095.99'
Tissue used: 'full endosperm'
AT4G02500 XT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '736.411'
Avg. expression score in LCM sample: '184.959'
Tissue used: 'full endosperm'
AT4G02500 XT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '428.562'
Avg. expression score in LCM sample: '184.959'
Tissue used: 'pure endosperm, no chalazal'
AT4G02500 XT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '353.815'
Avg. embryo expression (LCM): '249.049'
AT4G02500 XT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02500 XT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02500 XT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02489 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02489 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02489 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G02489 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02489 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G02489 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G02485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '44.3949'
Avg. expression score in LCM sample: '15.5504'
Tissue used: 'pure endosperm, no chalazal'
AT4G02485 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '48.8471'
Avg. embryo expression (LCM): '23.6101'
AT4G02485 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02485 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02485 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.40405 x 10-1 1 2 0 9 33.33% 100.00% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '53.3822'
Avg. expression score in LCM sample: '15.5504'
Tissue used: 'full endosperm'
AT4G02482 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.1243'
Avg. expression score in LCM sample: '10.9352'
Tissue used: 'full endosperm'
AT4G02482 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02482 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.14371'
Avg. embryo expression (LCM): '0'
AT4G02482 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.7762'
Avg. expression score in LCM sample: '10.9352'
Tissue used: 'pure endosperm, no chalazal'
AT4G02482 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02482 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.07576 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.752 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.87081 x 10-1 8 4 8 9 66.67% 52.94% 12 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.599553'
Avg. expression score for this sample: '2944.47'
Avg. expression score in LCM sample: '878.774'
Tissue used: 'full endosperm'
AT4G02480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.599553'
Avg. expression score for this sample: '1425.02'
Avg. expression score in LCM sample: '878.774'
Tissue used: 'pure endosperm, no chalazal'
AT4G02480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1227.03'
Avg. embryo expression (LCM): '893.844'
AT4G02480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.2032 x 10-2 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02465 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02465 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '13.248'
Avg. embryo expression (LCM): '0'
AT4G02465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.61731'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G02465 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02465 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.53974'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G02460 PMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7963 x 10-2 21 8 9 49 72.41% 84.48% 29 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.092779'
Avg. expression score for this sample: '29.8847'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'full endosperm'
AT4G02460 PMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 11 1 14 47.62% 93.33% 21 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.092779'
Avg. expression score for this sample: '15.3913'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'pure endosperm, no chalazal'
AT4G02460 PMS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.82745 x 10-1 13 22 5 8 37.14% 61.54% 35 13 TAIR8 Avg. embryo expression (dissected): '30.7859'
Avg. embryo expression (LCM): '27.5661'
AT4G02460 PMS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.72813 x 10-1 43 18 70.49% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02460 PMS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02460 PMS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6369 x 10-2 44 5 89.80% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 12030 603 95.23% 12633 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 336 858 28.14% 1194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 8195 425 2916 1129 95.07% 27.91% 8620 4045 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000017'
Avg. expression score for this sample: '2283.45'
Avg. expression score in LCM sample: '1059.56'
Tissue used: 'full endosperm'
AT4G02450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2164 3864 35.90% 6028 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0 18040 2054 5483 605 89.78% 9.94% 20094 6088 TAIR8 Avg. embryo expression (dissected): '9983.33'
Avg. embryo expression (LCM): '4400.15'
AT4G02450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.2 x 10-5 10096 647 5696 1444 93.98% 20.22% 10743 7140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000017'
Avg. expression score for this sample: '4372.42'
Avg. expression score in LCM sample: '1059.56'
Tissue used: 'pure endosperm, no chalazal'
AT4G02440 EID1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.53614 x 10-1 7 2 4 12 77.78% 75.00% 9 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.877118'
Avg. expression score for this sample: '411.253'
Avg. expression score in LCM sample: '135.882'
Tissue used: 'pure endosperm, no chalazal'
AT4G02440 EID1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.99792 x 10-1 6 7 5 0 46.15% 0.00% 13 5 TAIR8 Avg. embryo expression (dissected): '473.305'
Avg. embryo expression (LCM): '289.287'
AT4G02440 EID1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.17428 x 10-1 19 3 86.36% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02440 EID1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.75195 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02440 EID1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-6 46 0 100.00% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02440 EID1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 22 11 13 24 66.67% 64.86% 33 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.877118'
Avg. expression score for this sample: '391.666'
Avg. expression score in LCM sample: '135.882'
Tissue used: 'full endosperm'
AT4G02430 SR34b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4718 x 10-2 82 20 16 52 80.39% 76.47% 102 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.315173'
Avg. expression score for this sample: '148.505'
Avg. expression score in LCM sample: '64.8178'
Tissue used: 'full endosperm'
AT4G02430 SR34b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.355 x 10-2 36 5 87.80% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02430 SR34b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.57081 x 10-1 29 15 9 12 65.91% 57.14% 44 21 TAIR8 Avg. embryo expression (dissected): '507.365'
Avg. embryo expression (LCM): '75.7408'
AT4G02430 SR34b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.29069 x 10-1 36 16 29 29 69.23% 50.00% 52 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.315173'
Avg. expression score for this sample: '426.861'
Avg. expression score in LCM sample: '64.8178'
Tissue used: 'pure endosperm, no chalazal'
AT4G02430 SR34b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.746 x 10-3 111 21 84.09% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02430 SR34b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.95543 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02425 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02425 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '274.498'
Avg. expression score in LCM sample: '136.838'
Tissue used: 'full endosperm'
AT4G02425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '310.69'
Avg. expression score in LCM sample: '136.838'
Tissue used: 'pure endosperm, no chalazal'
AT4G02425 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '320.039'
Avg. embryo expression (LCM): '190.539'
AT4G02425 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.66667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.60275 x 10-1 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.578041'
Avg. embryo expression (LCM): '.627929'
AT4G02420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '1.5377'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G02420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.85714 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '2.39037'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G02410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 2 0 0 66.67% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.719238'
Avg. expression score in LCM sample: '.646708'
Tissue used: 'full endosperm'
AT4G02410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.113257'
Avg. expression score in LCM sample: '.646708'
Tissue used: 'pure endosperm, no chalazal'
AT4G02410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.128234'
Avg. embryo expression (LCM): '0'
AT4G02410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.60335 x 10-1 116 34 77.33% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.833 x 10-3 2089 35 98.35% 2124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.09298 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.49945 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 2 6 66.67% 75.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777097'
Avg. expression score for this sample: '14.8393'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'full endosperm'
AT4G02405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.55246 x 10-1 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 7 0 4 30.00% 100.00% 10 4 TAIR8 Avg. embryo expression (dissected): '17.4809'
Avg. embryo expression (LCM): '12.119'
AT4G02405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 3 10 60.00% 76.92% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777097'
Avg. expression score for this sample: '13.1533'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'pure endosperm, no chalazal'
AT4G02400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.34226 x 10-1 423 200 238 463 67.90% 66.05% 623 701 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.031261'
Avg. expression score for this sample: '154.108'
Avg. expression score in LCM sample: '61.7165'
Tissue used: 'pure endosperm, no chalazal'
AT4G02400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.0449 x 10-2 752 659 270 296 53.30% 52.30% 1411 566 TAIR8 Avg. embryo expression (dissected): '360.463'
Avg. embryo expression (LCM): '382.999'
AT4G02400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.22795 x 10-1 2620 1108 70.28% 3728 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G02400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4494 x 10-2 144 42 77.42% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'