| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G02660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.39328 x 10-1 | 19 | 3 | 86.36% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.932 x 10-3 | 265 | 62 | 81.04% | 327 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.11195 x 10-1 | 49 | 33 | 19 | 13 | 59.76% | 40.62% | 82 | 32 | TAIR8 |
Avg. embryo expression (dissected): '22.9868' Avg. embryo expression (LCM): '19.8928' |
||||
| AT4G02660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.38749 x 10-1 | 14 | 11 | 14 | 19 | 56.00% | 57.58% | 25 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.556811' Avg. expression score for this sample: '11.9901' Avg. expression score in LCM sample: '20.048' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.446715' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02655 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.08392 x 10-1 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02655 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 1 | 0 | 50.00% | 0.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '7.14594' Avg. embryo expression (LCM): '2.18519' |
||||
| AT4G02655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 3 | 1 | 1 | 62.50% | 50.00% | 8 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.12323' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G02655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.33696 x 10-1 | 14 | 11 | 56.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.2307 x 10-2 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.26434 x 10-1 | 18 | 14 | 5 | 8 | 56.25% | 61.54% | 32 | 13 | TAIR8 |
Avg. embryo expression (dissected): '15.4499' Avg. embryo expression (LCM): '0' |
||||
| AT4G02650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.4701 x 10-2 | 17 | 4 | 64 | 63 | 80.95% | 49.61% | 21 | 127 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.056389' Avg. expression score for this sample: '27.5475' Avg. expression score in LCM sample: '1.45509' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-7 | 6 | 32 | 15.79% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.92511 x 10-1 | 97 | 53 | 17 | 25 | 64.67% | 59.52% | 150 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.056389' Avg. expression score for this sample: '29.1846' Avg. expression score in LCM sample: '1.45509' Tissue used: 'full endosperm' |
|||||
| AT4G02640 | BZO2H1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.7 x 10-5 | 455 | 164 | 262 | 706 | 73.51% | 72.93% | 619 | 968 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000215' Avg. expression score for this sample: '1468.45' Avg. expression score in LCM sample: '196.232' Tissue used: 'full endosperm' |
||||
| AT4G02640 | BZO2H1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.633 x 10-3 | 95 | 18 | 84.07% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02640 | BZO2H1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-6 | 506 | 116 | 81.35% | 622 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02640 | BZO2H1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 660 | 39 | 94.42% | 699 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02640 | BZO2H1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.08694 x 10-1 | 49 | 38 | 39 | 25 | 56.32% | 39.06% | 87 | 64 | TAIR8 |
Avg. embryo expression (dissected): '577.135' Avg. embryo expression (LCM): '224.686' |
|||
| AT4G02640 | BZO2H1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.82394 x 10-1 | 174 | 75 | 81 | 159 | 69.88% | 66.25% | 249 | 240 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000215' Avg. expression score for this sample: '984.539' Avg. expression score in LCM sample: '196.232' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.81987 x 10-1 | 19 | 10 | 2 | 21 | 65.52% | 91.30% | 29 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.7e-09' Avg. expression score for this sample: '179.722' Avg. expression score in LCM sample: '45.5341' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8 x 10-7 | 199 | 4 | 98.03% | 203 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.22393 x 10-1 | 7 | 5 | 1 | 2 | 58.33% | 66.67% | 12 | 3 | TAIR8 |
Avg. embryo expression (dissected): '50.4182' Avg. embryo expression (LCM): '34.5863' |
||||
| AT4G02630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.2 x 10-9 | 104 | 26 | 7 | 131 | 80.00% | 94.93% | 130 | 138 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.7e-09' Avg. expression score for this sample: '682.946' Avg. expression score in LCM sample: '45.5341' Tissue used: 'full endosperm' |
|||||
| AT4G02630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 x 10-5 | 114 | 1 | 99.13% | 115 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0881 | 19 | 7 | 73.08% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '244.221' Avg. embryo expression (LCM): '143.293' |
||||||
| AT4G02620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '202.248' Avg. expression score in LCM sample: '76.8701' Tissue used: 'full endosperm' |
|||||||
| AT4G02620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '257.741' Avg. expression score in LCM sample: '76.8701' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '14.4374' Avg. expression score in LCM sample: '4.55635' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '44.329' Avg. expression score in LCM sample: '4.55635' Tissue used: 'full endosperm' |
||||||
| AT4G02610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '17.3443' Avg. embryo expression (LCM): '23.3715' |
||||||
| AT4G02600 | MLO1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 17 | 13 | 3 | 1 | 56.67% | 25.00% | 30 | 4 | TAIR8 |
Avg. embryo expression (dissected): '30.8497' Avg. embryo expression (LCM): '23.6604' |
|||
| AT4G02600 | MLO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.69061 x 10-1 | 325 | 131 | 71.27% | 456 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02600 | MLO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.3004 x 10-2 | 39 | 11 | 12 | 60 | 78.00% | 83.33% | 50 | 72 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.028002' Avg. expression score for this sample: '51.583' Avg. expression score in LCM sample: '7.48124' Tissue used: 'full endosperm' |
||||
| AT4G02600 | MLO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.51691 x 10-1 | 20 | 16 | 14 | 53 | 55.56% | 79.10% | 36 | 67 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.028002' Avg. expression score for this sample: '38.4997' Avg. expression score in LCM sample: '7.48124' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02600 | MLO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 3 | 78.57% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02600 | MLO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.6912 x 10-2 | 322 | 154 | 67.65% | 476 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02590 | UNE12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.63362 x 10-1 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02590 | UNE12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02590 | UNE12 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.80811 x 10-1 | 12 | 0 | 100.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02590 | UNE12 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 5 | 1 | 2 | 44.44% | 66.67% | 9 | 3 | TAIR8 |
Avg. embryo expression (dissected): '71.5387' Avg. embryo expression (LCM): '124.631' |
|||
| AT4G02590 | UNE12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 5 | 75.00% | 83.33% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.19608' Avg. expression score for this sample: '44.7415' Avg. expression score in LCM sample: '24.1487' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02590 | UNE12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.52108 x 10-1 | 15 | 1 | 4 | 10 | 93.75% | 71.43% | 16 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.19608' Avg. expression score for this sample: '103.85' Avg. expression score in LCM sample: '24.1487' Tissue used: 'full endosperm' |
||||
| AT4G02580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.13677 x 10-1 | 12 | 3 | 12 | 12 | 80.00% | 50.00% | 15 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836046' Avg. expression score for this sample: '567.255' Avg. expression score in LCM sample: '125.197' Tissue used: 'full endosperm' |
|||||
| AT4G02580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 2 | 2 | 4 | 66.67% | 66.67% | 6 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836046' Avg. expression score for this sample: '794.839' Avg. expression score in LCM sample: '125.197' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.52975 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.79798 x 10-1 | 34 | 12 | 73.91% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.05707 x 10-1 | 13 | 15 | 0 | 5 | 46.43% | 100.00% | 28 | 5 | TAIR8 |
Avg. embryo expression (dissected): '1163.7' Avg. embryo expression (LCM): '471.361' |
||||
| AT4G02580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.664 x 10-3 | 32 | 3 | 91.43% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02570 | CUL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.80601 x 10-1 | 16 | 12 | 57.14% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02570 | CUL1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 5 | 0 | 1 | 28.57% | 100.00% | 7 | 1 | TAIR8 |
Avg. embryo expression (dissected): '191.948' Avg. embryo expression (LCM): '212.767' |
|||
| AT4G02570 | CUL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 2 | 1 | 6 | 60.00% | 85.71% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.789294' Avg. expression score for this sample: '197.968' Avg. expression score in LCM sample: '215.589' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02570 | CUL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 3 | 3 | 10 | 62.50% | 76.92% | 8 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.789294' Avg. expression score for this sample: '314.733' Avg. expression score in LCM sample: '215.589' Tissue used: 'full endosperm' |
||||
| AT4G02570 | CUL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.8075 x 10-1 | 29 | 8 | 78.38% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02570 | CUL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.01293 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02560 | LD | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.33 x 10-4 | 32 | 1 | 96.97% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02560 | LD | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.53404 x 10-1 | 157 | 57 | 73.36% | 214 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02560 | LD | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.56298 x 10-1 | 65 | 43 | 24 | 24 | 60.19% | 50.00% | 108 | 48 | TAIR8 |
Avg. embryo expression (dissected): '151.635' Avg. embryo expression (LCM): '95.4577' |
|||
| AT4G02560 | LD | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-6 | 214 | 38 | 84.92% | 252 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02560 | LD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.69877 x 10-1 | 132 | 46 | 48 | 97 | 74.16% | 66.90% | 178 | 145 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.44067' Avg. expression score for this sample: '123.618' Avg. expression score in LCM sample: '57.704' Tissue used: 'full endosperm' |
||||
| AT4G02560 | LD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 93 | 21 | 57 | 61 | 81.58% | 51.69% | 114 | 118 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.44067' Avg. expression score for this sample: '140.584' Avg. expression score in LCM sample: '57.704' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02555 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02555 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G02555 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02555 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02555 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02555 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G02550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.08285 x 10-1 | 9 | 18 | 1 | 6 | 33.33% | 85.71% | 27 | 7 | TAIR8 |
Avg. embryo expression (dissected): '38.8448' Avg. embryo expression (LCM): '31.1829' |
||||
| AT4G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6 x 10-8 | 66 | 0 | 100.00% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.5333 x 10-2 | 52 | 12 | 19 | 54 | 81.25% | 73.97% | 64 | 73 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206113' Avg. expression score for this sample: '88.0406' Avg. expression score in LCM sample: '11.8318' Tissue used: 'full endosperm' |
|||||
| AT4G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 25 | 18 | 9 | 25 | 58.14% | 73.53% | 43 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206113' Avg. expression score for this sample: '43.2998' Avg. expression score in LCM sample: '11.8318' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 4 | 73.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-5 | 16 | 25 | 39.02% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02541 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02541 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02541 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02541 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.07372' Avg. embryo expression (LCM): '0' |
|||||
| AT4G02541 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02541 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G02540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.972 x 10-3 | 285 | 8 | 94 | 46 | 97.27% | 32.86% | 293 | 140 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002546' Avg. expression score for this sample: '47.886' Avg. expression score in LCM sample: '9.37727' Tissue used: 'full endosperm' |
|||||
| AT4G02540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.60466 x 10-1 | 69 | 8 | 24 | 7 | 89.61% | 22.58% | 77 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002546' Avg. expression score for this sample: '19.9961' Avg. expression score in LCM sample: '9.37727' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-12 | 5 | 29 | 14.71% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0017 x 10-2 | 56 | 35 | 61.54% | 91 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.3 x 10-5 | 125 | 11 | 39 | 5 | 91.91% | 11.36% | 136 | 44 | TAIR8 |
Avg. embryo expression (dissected): '61.1725' Avg. embryo expression (LCM): '39.1451' |
||||
| AT4G02540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 438 | 1 | 99.77% | 439 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.3797 x 10-2 | 36 | 8 | 81.82% | 44 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.01239 x 10-1 | 88 | 123 | 23 | 50 | 41.71% | 68.49% | 211 | 73 | TAIR8 |
Avg. embryo expression (dissected): '162.431' Avg. embryo expression (LCM): '92.9209' |
||||
| AT4G02530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.54903 x 10-1 | 47 | 46 | 11 | 51 | 50.54% | 82.26% | 93 | 62 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.658349' Avg. expression score for this sample: '56.3852' Avg. expression score in LCM sample: '8.49539' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.00888 x 10-1 | 68 | 44 | 32 | 120 | 60.71% | 78.95% | 112 | 152 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.658349' Avg. expression score for this sample: '69.9534' Avg. expression score in LCM sample: '8.49539' Tissue used: 'full endosperm' |
|||||
| AT4G02530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.06623 x 10-1 | 28 | 17 | 62.22% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.64561 x 10-1 | 18 | 5 | 78.26% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |