| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G394638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 163 | 0 | 210 | 1 | 100.00% | 0.47% | 163 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.50e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G394638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15 x 10-17 | 144 | 0 | 96 | 1 | 100.00% | 1.03% | 144 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.15e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G394528 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.25 x 10-11 | 406 | 237 | 457 | 281 | 63.14% | 38.08% | 643 | 738 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.65e-11' χ2 p-value for Mo17 x B73: '9.25e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G394528 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.882 x 10-4 | 113 | 28 | 97 | 54 | 80.14% | 35.76% | 141 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006882' χ2 p-value for Mo17 x B73: '7.88e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G394500 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 2 | 4 | 5 | 85.71% | 55.56% | 14 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G394500 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G394403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 3 | 1 | 42.86% | 25.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G394403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G394321 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.22 x 10-27 | 219 | 42 | 192 | 31 | 83.91% | 13.90% | 261 | 223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.22e-28' χ2 p-value for Mo17 x B73: '4.22e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G394321 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.688906 x 10-1 | 45 | 58 | 76 | 168 | 43.69% | 68.85% | 103 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.54e-07' χ2 p-value for Mo17 x B73: '.4688906' Biased in favor of strain: '' |
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| GRMZM2G394212 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.886635 x 10-1 | 96 | 71 | 59 | 50 | 57.49% | 45.87% | 167 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0530445' χ2 p-value for Mo17 x B73: '.3886635' Biased in favor of strain: '' |
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| GRMZM2G394212 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.850703 x 10-1 | 34 | 29 | 27 | 49 | 53.97% | 64.47% | 63 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325058' χ2 p-value for Mo17 x B73: '.6850703' Biased in favor of strain: '' |
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| GRMZM2G394203 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 4.32 x 10-8 | 38 | 0 | 0 | 30 | 100.00% | 100.00% | 38 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.07e-10' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: '' |
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| GRMZM2G394203 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 4.91 x 10-9 | 93 | 1 | 2 | 78 | 98.94% | 97.50% | 94 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.20e-11' χ2 p-value for Mo17 x B73: '4.91e-09' Biased in favor of strain: '' |
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| GRMZM2G393988 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.653 x 10-4 | 15 | 1 | 33 | 0 | 93.75% | 0.00% | 16 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004653' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G393988 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G393897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 5 | 6 | 0.00% | 54.55% | 2 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G393897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 8 | 5 | 60.00% | 38.46% | 5 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: '' |
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| GRMZM2G393762 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 0 | 1 | 0.00% | 100.00% | 11 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G393762 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G393742 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.903 x 10-4 | 95 | 52 | 88 | 32 | 64.63% | 26.67% | 147 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003903' χ2 p-value for Mo17 x B73: '3.19e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G393742 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1202 x 10-3 | 58 | 10 | 52 | 41 | 85.29% | 44.09% | 68 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011202' χ2 p-value for Mo17 x B73: '3.85e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G393529 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.741491 x 10-1 | 60 | 54 | 59 | 50 | 52.63% | 45.87% | 114 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5741491' χ2 p-value for Mo17 x B73: '.3886635' Biased in favor of strain: '' |
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| GRMZM2G393529 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434122 x 10-1 | 13 | 8 | 34 | 40 | 61.90% | 54.05% | 21 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6434122' χ2 p-value for Mo17 x B73: '.0213585' Biased in favor of strain: '' |
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| GRMZM2G393471 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.459 x 10-4 | 772 | 642 | 658 | 488 | 54.60% | 42.58% | 1414 | 1146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005459' χ2 p-value for Mo17 x B73: '5.12e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G393471 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 57 | 499 | 558 | 34 | 10.25% | 5.74% | 556 | 592 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G393349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.81935 x 10-2 | 32 | 13 | 21 | 10 | 71.11% | 32.26% | 45 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046207' χ2 p-value for Mo17 x B73: '.0481935' Biased in favor of strain: 'B73' |
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| GRMZM2G393349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 2 | 3 | 3 | 83.33% | 50.00% | 12 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G393337 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.228635 x 10-1 | 503 | 422 | 499 | 474 | 54.38% | 48.72% | 925 | 973 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0077387' χ2 p-value for Mo17 x B73: '.4228635' Biased in favor of strain: '' |
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| GRMZM2G393337 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.827649 x 10-1 | 15 | 8 | 6 | 35 | 65.22% | 85.37% | 23 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8827649' χ2 p-value for Mo17 x B73: '.0110876' Biased in favor of strain: '' |
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| GRMZM2G393062 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.215091 x 10-1 | 400 | 309 | 205 | 207 | 56.42% | 50.24% | 709 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006318' χ2 p-value for Mo17 x B73: '.9215091' Biased in favor of strain: '' |
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| GRMZM2G393062 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.6232 x 10-3 | 274 | 220 | 150 | 386 | 55.47% | 72.01% | 494 | 536 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.28e-07' χ2 p-value for Mo17 x B73: '.0086232' Biased in favor of strain: 'Mo17' |
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| GRMZM2G393002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327676 x 10-1 | 11 | 15 | 0 | 12 | 42.31% | 100.00% | 26 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327676' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G393002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 86 | 0 | 14 | 0 | 100.00% | 0.00% | 86 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.47e-11' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G392975 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1018 | 302 | 971 | 297 | 77.12% | 23.42% | 1320 | 1268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G392975 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.44459 x 10-2 | 39 | 33 | 25 | 6 | 54.17% | 19.35% | 72 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0244459' χ2 p-value for Mo17 x B73: '2.30e-08' Biased in favor of strain: '' |
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| GRMZM2G392956 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.988 x 10-4 | 546 | 326 | 432 | 334 | 62.61% | 43.60% | 872 | 766 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.32e-14' χ2 p-value for Mo17 x B73: '.0003988' Biased in favor of strain: 'B73' |
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| GRMZM2G392956 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.67731 x 10-2 | 344 | 109 | 228 | 383 | 75.94% | 62.68% | 453 | 611 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000284' χ2 p-value for Mo17 x B73: '.0367731' Biased in favor of strain: '' |
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| GRMZM2G392863 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.08 x 10-6 | 1362 | 551 | 528 | 687 | 71.20% | 56.54% | 1913 | 1215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.08e-06' Biased in favor of strain: '' |
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| GRMZM2G392863 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.52 x 10-10 | 17399 | 9426 | 3052 | 7316 | 64.86% | 70.56% | 26825 | 10368 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.52e-10' χ2 p-value for Mo17 x B73: '3.87e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G392791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93 x 10-12 | 30 | 112 | 22 | 170 | 21.13% | 88.54% | 142 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.93e-12' χ2 p-value for Mo17 x B73: '1.25e-26' Biased in favor of strain: 'Mo17' |
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| GRMZM2G392791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 75 | 644 | 33 | 1105 | 10.43% | 97.10% | 719 | 1138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G392737 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 12 | 2 | 3 | 33.33% | 60.00% | 18 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G392737 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.336143 x 10-1 | 16 | 1 | 9 | 9 | 94.12% | 50.00% | 17 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163517' χ2 p-value for Mo17 x B73: '.1336143' Biased in favor of strain: '' |
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| GRMZM2G392710 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.77569 x 10-2 | 457 | 335 | 293 | 247 | 57.70% | 45.74% | 792 | 540 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000146' χ2 p-value for Mo17 x B73: '.0477569' Biased in favor of strain: 'B73' |
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| GRMZM2G392710 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.278024 x 10-1 | 162 | 82 | 142 | 167 | 66.39% | 54.05% | 244 | 309 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9278024' χ2 p-value for Mo17 x B73: '2.52e-06' Biased in favor of strain: '' |
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| GRMZM2G392649 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.588157 x 10-1 | 260 | 192 | 188 | 187 | 57.52% | 49.87% | 452 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013817' χ2 p-value for Mo17 x B73: '.9588157' Biased in favor of strain: '' |
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| GRMZM2G392649 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.01 x 10-7 | 537 | 173 | 296 | 346 | 75.63% | 53.89% | 710 | 642 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.01e-07' χ2 p-value for Mo17 x B73: '6.64e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G392524 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 6 | 4 | 75.00% | 40.00% | 4 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| GRMZM2G392524 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 3 | 25.00% | 100.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G392513 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 15 | 1 | 12 | 0 | 93.75% | 0.00% | 16 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004653' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'B73' |
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| GRMZM2G392513 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 0 | 0 | 100.00% | 15 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G392477 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 692 | 287 | 602 | 244 | 70.68% | 28.84% | 979 | 846 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.55e-38' χ2 p-value for Mo17 x B73: '8.17e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G392477 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.84 x 10-7 | 605 | 198 | 323 | 358 | 75.34% | 52.57% | 803 | 681 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.84e-07' χ2 p-value for Mo17 x B73: '6.01e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G392345 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.150006 x 10-1 | 14 | 16 | 36 | 15 | 46.67% | 29.41% | 30 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7150006' χ2 p-value for Mo17 x B73: '.0032759' Biased in favor of strain: '' |
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| GRMZM2G392345 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.1 x 10-23 | 406 | 53 | 188 | 54 | 88.45% | 22.31% | 459 | 242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.10e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G392320 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 54 | 44 | 41 | 35 | 55.10% | 46.05% | 98 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3124222' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: '' |
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| GRMZM2G392320 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 10 | 11 | 50.00% | 52.38% | 8 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: '' |
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| GRMZM2G392306 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G392306 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 1 | 100.00% | 100.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G392224 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 2 | 1 | 100.00% | 33.33% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G392224 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 2 | 0 | 100.00% | 0.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G392125 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.56 x 10-9 | 1341 | 1058 | 756 | 474 | 55.90% | 38.54% | 2399 | 1230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.56e-09' χ2 p-value for Mo17 x B73: '8.93e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G392125 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.108825 x 10-1 | 59 | 32 | 208 | 271 | 64.84% | 56.58% | 91 | 479 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7108825' χ2 p-value for Mo17 x B73: '2.80e-06' Biased in favor of strain: '' |
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| GRMZM2G392116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.604951 x 10-1 | 236 | 154 | 228 | 199 | 60.51% | 46.60% | 390 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000329' χ2 p-value for Mo17 x B73: '.1604951' Biased in favor of strain: '' |
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| GRMZM2G392116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.115113 x 10-1 | 846 | 510 | 418 | 848 | 62.39% | 66.98% | 1356 | 1266 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008336' χ2 p-value for Mo17 x B73: '.8115113' Biased in favor of strain: '' |
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| GRMZM2G392106 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 1 | 0 | 50.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G392106 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G392101 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.674 x 10-4 | 50 | 22 | 65 | 29 | 69.44% | 30.85% | 72 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009674' χ2 p-value for Mo17 x B73: '.0002047' Biased in favor of strain: 'B73' |
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| GRMZM2G392101 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.47 x 10-15 | 315 | 51 | 191 | 102 | 86.07% | 34.81% | 366 | 293 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.47e-15' χ2 p-value for Mo17 x B73: '6.08e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G392040 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 2 | 0 | 100.00% | 0.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G392040 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 0 | 4 | 0 | 100.00% | 0.00% | 16 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G392037 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 14 | 66.67% | 93.33% | 3 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: '' |
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| GRMZM2G392037 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 2 | 1 | 33.33% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G391795 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.134648 x 10-1 | 249 | 222 | 354 | 292 | 52.87% | 45.20% | 471 | 646 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2134648' χ2 p-value for Mo17 x B73: '.0147134' Biased in favor of strain: '' |
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| GRMZM2G391795 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391741 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 6 | 5 | 4 | 64.71% | 44.44% | 17 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G391741 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 4 | 7 | 83.33% | 63.64% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: '' |
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| GRMZM2G391596 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.053805 x 10-1 | 2 | 8 | 5 | 8 | 20.00% | 61.54% | 10 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: '' |
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| GRMZM2G391596 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.206884 x 10-1 | 78 | 30 | 40 | 54 | 72.22% | 57.45% | 108 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206884' χ2 p-value for Mo17 x B73: '.0579276' Biased in favor of strain: '' |
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| GRMZM2G391511 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.828 x 10-4 | 23 | 2 | 14 | 0 | 92.00% | 0.00% | 25 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000267' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73' |
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| GRMZM2G391511 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 12 | 0 | 100.00% | 0.00% | 7 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: '' |
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| GRMZM2G391487 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.967056 x 10-1 | 13 | 1 | 10 | 5 | 92.86% | 33.33% | 14 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G391487 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.07986 x 10-1 | 361 | 334 | 243 | 266 | 51.94% | 52.26% | 695 | 509 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3057558' χ2 p-value for Mo17 x B73: '.307986' Biased in favor of strain: '' |
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| GRMZM2G391413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.085561 x 10-1 | 431 | 245 | 294 | 484 | 63.76% | 62.21% | 676 | 778 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1085561' χ2 p-value for Mo17 x B73: '.0083765' Biased in favor of strain: '' |
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| GRMZM2G391339 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391339 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 6 | 100.00% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391312 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 5 | 3 | 0 | 28.57% | 0.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G391312 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391288 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391288 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 10 | 0 | 100.00% | 0.00% | 3 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: '' |
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| GRMZM2G391272 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G391272 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 2 | 33.33% | 100.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G391148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G391148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 10 | 0.00% | 100.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G391042 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.555088 x 10-1 | 107 | 91 | 83 | 111 | 54.04% | 57.22% | 198 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2555088' χ2 p-value for Mo17 x B73: '.0444013' Biased in favor of strain: '' |
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| GRMZM2G391042 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.366239 x 10-1 | 53 | 26 | 28 | 39 | 67.09% | 58.21% | 79 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9366239' χ2 p-value for Mo17 x B73: '.1419476' Biased in favor of strain: '' |
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| GRMZM2G391000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.084328 x 10-1 | 254 | 178 | 185 | 210 | 58.80% | 53.16% | 432 | 395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002556' χ2 p-value for Mo17 x B73: '.2084328' Biased in favor of strain: '' |
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| GRMZM2G391000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.223 x 10-4 | 294 | 96 | 223 | 332 | 75.38% | 59.82% | 390 | 555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002601' χ2 p-value for Mo17 x B73: '.0006223' Biased in favor of strain: 'B73' |