| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G02950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.60709' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G02950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.911055' Avg. embryo expression (LCM): '0' |
|||||
| AT4G02950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.536435' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.102 x 10-2 | 61 | 4 | 93.85% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.55155 x 10-1 | 25 | 24 | 4 | 7 | 51.02% | 63.64% | 49 | 11 | TAIR8 |
Avg. embryo expression (dissected): '64.162' Avg. embryo expression (LCM): '63.8352' |
||||
| AT4G02940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.81673 x 10-1 | 454 | 71 | 86.48% | 525 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.4 x 10-15 | 312 | 46 | 61 | 275 | 87.15% | 81.85% | 358 | 336 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.3e-15' Avg. expression score for this sample: '324.929' Avg. expression score in LCM sample: '11.8759' Tissue used: 'full endosperm' |
|||||
| AT4G02940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.33421 x 10-1 | 32 | 12 | 8 | 34 | 72.73% | 80.95% | 44 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.3e-15' Avg. expression score for this sample: '80.1743' Avg. expression score in LCM sample: '11.8759' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2398 | 37 | 98.48% | 2435 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-14 | 581 | 96 | 85.82% | 677 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.7758 x 10-1 | 74 | 33 | 32 | 38 | 69.16% | 54.29% | 107 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.896742' Avg. expression score for this sample: '101.381' Avg. expression score in LCM sample: '69.0655' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.61464 x 10-1 | 28 | 12 | 70.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.22792 x 10-1 | 106 | 18 | 93 | 142 | 85.48% | 60.43% | 124 | 235 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.896742' Avg. expression score for this sample: '111.416' Avg. expression score in LCM sample: '69.0655' Tissue used: 'full endosperm' |
|||||
| AT4G02930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.167 x 10-2 | 289 | 185 | 60.97% | 474 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.596 x 10-3 | 246 | 152 | 44 | 34 | 61.81% | 43.59% | 398 | 78 | TAIR8 |
Avg. embryo expression (dissected): '355.8' Avg. embryo expression (LCM): '479.311' |
||||
| AT4G02920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.0 x 10-17 | 571 | 131 | 123 | 26 | 81.34% | 17.45% | 702 | 149 | TAIR8 |
Avg. embryo expression (dissected): '270.808' Avg. embryo expression (LCM): '93.147' |
||||
| AT4G02920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-6 | 287 | 53 | 84.41% | 340 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.23 x 10-4 | 1028 | 66 | 464 | 348 | 93.97% | 42.86% | 1094 | 812 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.5e-09' Avg. expression score for this sample: '308.146' Avg. expression score in LCM sample: '58.145' Tissue used: 'full endosperm' |
|||||
| AT4G02920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.4 x 10-6 | 1040 | 75 | 355 | 189 | 93.27% | 34.74% | 1115 | 544 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '4.5e-09' Avg. expression score for this sample: '359.536' Avg. expression score in LCM sample: '58.145' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1234 | 37 | 97.09% | 1271 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.438 x 10-3 | 64 | 42 | 60.38% | 106 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.699 x 10-3 | 25 | 0 | 0 | 1 | 100.00% | 100.00% | 25 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.3e-06' Avg. expression score for this sample: '12.9577' Avg. expression score in LCM sample: '7.80459' Tissue used: 'full endosperm' |
|||||
| AT4G02910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02910 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.54017' Avg. embryo expression (LCM): '0' |
|||||
| AT4G02910 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.737 x 10-3 | 46 | 0 | 4 | 2 | 100.00% | 33.33% | 46 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.3e-06' Avg. expression score for this sample: '40.1828' Avg. expression score in LCM sample: '7.80459' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.64472' Avg. expression score for this sample: '2.63885' Avg. expression score in LCM sample: '1.24932' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G02900 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.04762 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02900 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.99792 x 10-1 | 6 | 9 | 3 | 0 | 40.00% | 0.00% | 15 | 3 | TAIR8 |
Avg. embryo expression (dissected): '9.43062' Avg. embryo expression (LCM): '4.28247' |
||||
| AT4G02900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.76471 x 10-1 | 4 | 0 | 1 | 4 | 100.00% | 80.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.64472' Avg. expression score for this sample: '3.25219' Avg. expression score in LCM sample: '1.24932' Tissue used: 'full endosperm' |
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| AT4G02890 | UBQ14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.125 x 10-2 | 169 | 67 | 117 | 332 | 71.61% | 73.94% | 236 | 449 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.023174' Avg. expression score for this sample: '772.142' Avg. expression score in LCM sample: '443.804' Tissue used: 'full endosperm' |
||||
| AT4G02890 | UBQ14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.908 x 10-3 | 440 | 122 | 78.29% | 562 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02890 | UBQ14 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.16696 x 10-1 | 29 | 37 | 3 | 3 | 43.94% | 50.00% | 66 | 6 | TAIR8 |
Avg. embryo expression (dissected): '434.586' Avg. embryo expression (LCM): '360.18' |
|||
| AT4G02890 | UBQ14 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.601 x 10-2 | 340 | 101 | 77.10% | 441 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02890 | UBQ14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.22152 x 10-1 | 54 | 55 | 22 | 106 | 49.54% | 82.81% | 109 | 128 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.023174' Avg. expression score for this sample: '1011.44' Avg. expression score in LCM sample: '443.804' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G02890 | UBQ14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.813 x 10-3 | 84 | 16 | 84.00% | 100 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 36 | 16 | 69.23% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02880 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.2687 x 10-2 | 43 | 22 | 12 | 21 | 66.15% | 63.64% | 65 | 33 | TAIR8 |
Avg. embryo expression (dissected): '50.7647' Avg. embryo expression (LCM): '22.932' |
||||
| AT4G02880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.4131 x 10-2 | 396 | 215 | 64.81% | 611 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.1048 x 10-2 | 205 | 73 | 88 | 223 | 73.74% | 71.70% | 278 | 311 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.246547' Avg. expression score for this sample: '136.052' Avg. expression score in LCM sample: '43.7851' Tissue used: 'full endosperm' |
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| AT4G02880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.3982 x 10-1 | 147 | 60 | 109 | 162 | 71.01% | 59.78% | 207 | 271 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.246547' Avg. expression score for this sample: '130.6' Avg. expression score in LCM sample: '43.7851' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02880 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-8 | 684 | 170 | 80.09% | 854 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02871 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02871 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02871 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02871 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G02871 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02871 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G02870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G02870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.16728' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G02870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G02870 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.43503 x 10-1 | 30 | 10 | 75.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.7 x 10-5 | 119 | 17 | 32 | 103 | 87.50% | 76.30% | 136 | 135 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000104' Avg. expression score for this sample: '64.1666' Avg. expression score in LCM sample: '22.1939' Tissue used: 'full endosperm' |
|||||
| AT4G02860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-8 | 154 | 6 | 96.25% | 160 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02860 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.11256 x 10-1 | 57 | 44 | 13 | 9 | 56.44% | 40.91% | 101 | 22 | TAIR8 |
Avg. embryo expression (dissected): '67.0854' Avg. embryo expression (LCM): '46.3537' |
||||
| AT4G02860 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-20 | 420 | 7 | 98.36% | 427 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.23271 x 10-1 | 52 | 17 | 15 | 35 | 75.36% | 70.00% | 69 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000104' Avg. expression score for this sample: '48.2687' Avg. expression score in LCM sample: '22.1939' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G02850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G02850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.281865' Avg. embryo expression (LCM): '0' |
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| AT4G02850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 5 | 1 | 0 | 0 | 83.33% | 6 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.05395' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G02840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.35806 x 10-1 | 12 | 6 | 5 | 34 | 66.67% | 87.18% | 18 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.071592' Avg. expression score for this sample: '123.221' Avg. expression score in LCM sample: '45.4607' Tissue used: 'full endosperm' |
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| AT4G02840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 54 | 11 | 83.08% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02840 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 8 | 8 | 3 | 1 | 50.00% | 25.00% | 16 | 4 | TAIR8 |
Avg. embryo expression (dissected): '185.732' Avg. embryo expression (LCM): '419.858' |
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| AT4G02840 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.44995 x 10-1 | 26 | 9 | 74.29% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.23077 x 10-1 | 3 | 1 | 0 | 4 | 75.00% | 100.00% | 4 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.071592' Avg. expression score for this sample: '120.962' Avg. expression score in LCM sample: '45.4607' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G02840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 1 | 1 | 0 | 75.00% | 0.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.27413' Avg. embryo expression (LCM): '0' |
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| AT4G02830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G02830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.9641 x 10-2 | 11 | 2 | 28 | 17 | 84.62% | 37.78% | 13 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004457' Avg. expression score for this sample: '12.7457' Avg. expression score in LCM sample: '15.7856' Tissue used: 'full endosperm' |
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| AT4G02830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.7697 x 10-2 | 26 | 7 | 37 | 19 | 78.79% | 33.93% | 33 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004457' Avg. expression score for this sample: '27.8216' Avg. expression score in LCM sample: '15.7856' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G02830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.66861 x 10-1 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5182 x 10-2 | 111 | 23 | 82.84% | 134 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 25 | 24 | 5 | 4 | 51.02% | 44.44% | 49 | 9 | TAIR8 |
Avg. embryo expression (dissected): '93.5453' Avg. embryo expression (LCM): '143.708' |
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| AT4G02820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 9 | 5 | 16 | 52.63% | 76.19% | 19 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.197568' Avg. expression score for this sample: '49.1949' Avg. expression score in LCM sample: '28.514' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G02820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.1661 x 10-2 | 49 | 7 | 25 | 53 | 87.50% | 67.95% | 56 | 78 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.197568' Avg. expression score for this sample: '82.4177' Avg. expression score in LCM sample: '28.514' Tissue used: 'full endosperm' |
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| AT4G02820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.197 x 10-3 | 96 | 11 | 89.72% | 107 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02810 | FAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02810 | FAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.63872' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G02810 | FAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.2366' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G02810 | FAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 0 | 100.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G02810 | FAF1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.24746' Avg. embryo expression (LCM): '0' |
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| AT4G02810 | FAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 67 | 31 | 68.37% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.5132 x 10-1 | 210 | 130 | 175 | 493 | 61.76% | 73.80% | 340 | 668 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.396128' Avg. expression score for this sample: '151.791' Avg. expression score in LCM sample: '54.9408' Tissue used: 'full endosperm' |
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| AT4G02800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.58553 x 10-1 | 31 | 19 | 62.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G02800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.4067 x 10-2 | 380 | 297 | 72 | 77 | 56.13% | 51.68% | 677 | 149 | TAIR8 |
Avg. embryo expression (dissected): '267.543' Avg. embryo expression (LCM): '342.937' |