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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G03340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 11 1 1 6 91.67% 85.71% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001033'
Avg. expression score for this sample: '6.0354'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.762 x 10-3 42 5 14 51 89.36% 78.46% 47 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001033'
Avg. expression score for this sample: '25.4829'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-9 232 1 99.57% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.44851 x 10-1 6 1 2 3 85.71% 60.00% 7 5 TAIR8 Avg. embryo expression (dissected): '9.24848'
Avg. embryo expression (LCM): '8.38913'
AT4G03340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-6 102 0 100.00% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.7391 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03330 SYP123 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03330 SYP123 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.12482'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03330 SYP123 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.64433'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03330 SYP123 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03330 SYP123 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.32257'
Avg. embryo expression (LCM): '0'
AT4G03330 SYP123 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03320 Tic20-IV endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.15661 x 10-1 156 19 89.14% 175 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03320 Tic20-IV embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 6 1 1 0 85.71% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '25.431'
Avg. embryo expression (LCM): '11.9683'
AT4G03320 Tic20-IV endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-6 96 58 62.34% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03320 Tic20-IV endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.28863 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03320 Tic20-IV endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.60002 x 10-1 14 1 5 13 93.33% 72.22% 15 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '84.5728'
Avg. expression score in LCM sample: '52.5303'
Tissue used: 'pure endosperm, no chalazal'
AT4G03320 Tic20-IV endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.78 x 10-4 75 9 14 55 89.29% 79.71% 84 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '120.122'
Avg. expression score in LCM sample: '52.5303'
Tissue used: 'full endosperm'
AT4G03298 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03298 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03298 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G03298 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03298 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03298 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03295 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03295 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03295 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03295 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G03292 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.8881'
Avg. embryo expression (LCM): '38.1404'
AT4G03292 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03292 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.02417'
Avg. expression score in LCM sample: '6.86393'
Tissue used: 'pure endosperm, no chalazal'
AT4G03292 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03292 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03292 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.536'
Avg. expression score in LCM sample: '6.86393'
Tissue used: 'full endosperm'
AT4G03290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-6 9 13 27 0 40.91% 0.00% 22 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000018'
Avg. expression score for this sample: '18.3977'
Avg. expression score in LCM sample: '8.49539'
Tissue used: 'full endosperm'
AT4G03290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.09276 x 10-1 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.72778 x 10-1 2 0 26 27 100.00% 50.94% 2 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000018'
Avg. expression score for this sample: '31.5936'
Avg. expression score in LCM sample: '8.49539'
Tissue used: 'pure endosperm, no chalazal'
AT4G03290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 0 0 4 1 20.00% 0 5 TAIR8 Avg. embryo expression (dissected): '11.1881'
Avg. embryo expression (LCM): '0'
AT4G03290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.19978 x 10-1 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03285 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03285 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03285 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03285 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G03285 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03285 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03280 PETC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.90447 x 10-1 15 15 6 19 50.00% 76.00% 30 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.361877'
Avg. expression score for this sample: '318.888'
Avg. expression score in LCM sample: '83.8663'
Tissue used: 'pure endosperm, no chalazal'
AT4G03280 PETC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.81702 x 10-1 34 21 61.82% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03280 PETC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.652 x 10-3 36 7 83.72% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03280 PETC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.31606 x 10-1 40 63 6 18 38.83% 75.00% 103 24 TAIR8 Avg. embryo expression (dissected): '692.298'
Avg. embryo expression (LCM): '470.155'
AT4G03280 PETC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1764 x 10-1 21 14 60.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03280 PETC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.10672 x 10-1 82 63 56 124 56.55% 68.89% 145 180 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.361877'
Avg. expression score for this sample: '454.189'
Avg. expression score in LCM sample: '83.8663'
Tissue used: 'full endosperm'
AT4G03270 CYCD6;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.88877 x 10-1 5 4 11 9 55.56% 45.00% 9 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404753'
Avg. expression score for this sample: '28.5076'
Avg. expression score in LCM sample: '8.14264'
Tissue used: 'full endosperm'
AT4G03270 CYCD6;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 3 6 2 1 33.33% 33.33% 9 3 TAIR8 Avg. embryo expression (dissected): '15.7376'
Avg. embryo expression (LCM): '20.8598'
AT4G03270 CYCD6;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03270 CYCD6;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 5 11 75.00% 68.75% 4 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404753'
Avg. expression score for this sample: '16.0602'
Avg. expression score in LCM sample: '8.14264'
Tissue used: 'pure endosperm, no chalazal'
AT4G03270 CYCD6;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.17845 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03270 CYCD6;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.57434 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.69906 x 10-1 17 12 7 11 58.62% 61.11% 29 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864299'
Avg. expression score for this sample: '97.3088'
Avg. expression score in LCM sample: '33.6582'
Tissue used: 'full endosperm'
AT4G03260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.29 x 10-4 66 5 92.96% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.47699 x 10-1 10 0 5 17 100.00% 77.27% 10 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864299'
Avg. expression score for this sample: '63.7411'
Avg. expression score in LCM sample: '33.6582'
Tissue used: 'pure endosperm, no chalazal'
AT4G03260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 13 1 6 38.10% 85.71% 21 7 TAIR8 Avg. embryo expression (dissected): '83.3923'
Avg. embryo expression (LCM): '64.6013'
AT4G03260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.928 x 10-2 68 13 83.95% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.086 x 10-3 41 2 95.35% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 1 6 4 1 14.29% 20.00% 7 5 TAIR8 Avg. embryo expression (dissected): '30.8068'
Avg. embryo expression (LCM): '29.0982'
AT4G03250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.00683 x 10-1 24 15 61.54% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 3 60.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.378814'
Avg. expression score for this sample: '22.8636'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'pure endosperm, no chalazal'
AT4G03250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.56449 x 10-1 21 12 6 30 63.64% 83.33% 33 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.378814'
Avg. expression score for this sample: '43.0591'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'full endosperm'
AT4G03240 FH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '54.5779'
Avg. expression score in LCM sample: '18.0784'
Tissue used: 'full endosperm'
AT4G03240 FH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.1449'
Avg. expression score in LCM sample: '18.0784'
Tissue used: 'pure endosperm, no chalazal'
AT4G03240 FH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03240 FH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03240 FH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '46.1031'
Avg. embryo expression (LCM): '41.707'
AT4G03240 FH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.99 x 10-4 1 8 11.11% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.83814 x 10-1 34 2 14 6 94.44% 30.00% 36 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '22.3723'
Avg. expression score in LCM sample: '12.6696'
Tissue used: 'full endosperm'
AT4G03230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.27243 x 10-1 15 13 10 4 53.57% 28.57% 28 14 TAIR8 Avg. embryo expression (dissected): '28.4036'
Avg. embryo expression (LCM): '24.0999'
AT4G03230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.076 x 10-3 26 23 53.06% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.23291 x 10-1 18 1 3 7 94.74% 70.00% 19 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '10.2082'
Avg. expression score in LCM sample: '12.6696'
Tissue used: 'pure endosperm, no chalazal'
AT4G03230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.015 x 10-3 82 5 94.25% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G03220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.38865'
Avg. embryo expression (LCM): '0'
AT4G03220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.726618'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G03210 XTH9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02211 x 10-1 1 0 3 20 100.00% 86.96% 1 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.805438'
Avg. expression score for this sample: '82.4992'
Avg. expression score in LCM sample: '6.87862'
Tissue used: 'full endosperm'
AT4G03210 XTH9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03210 XTH9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.08694 x 10-1 63 64 10 15 49.61% 60.00% 127 25 TAIR8 Avg. embryo expression (dissected): '735.064'
Avg. embryo expression (LCM): '703.707'
AT4G03210 XTH9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.82707 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03210 XTH9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.49482 x 10-1 5 5 3 1 50.00% 25.00% 10 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.805438'
Avg. expression score for this sample: '53.7078'
Avg. expression score in LCM sample: '6.87862'
Tissue used: 'pure endosperm, no chalazal'
AT4G03210 XTH9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.64088 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03205 hemf2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.72941 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G03205 hemf2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.80722 x 10-1 14 9 11 17 60.87% 60.71% 23 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.6605'
Avg. expression score in LCM sample: '2.1018'
Tissue used: 'full endosperm'
AT4G03205 hemf2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35353 x 10-1 21 7 4 11 75.00% 73.33% 28 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.1717'
Avg. expression score in LCM sample: '2.1018'
Tissue used: 'pure endosperm, no chalazal'
AT4G03205 hemf2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-5 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'