Displaying data sets 61901 - 62000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G04540 CRK39 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04540 CRK39 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04510 CRK38 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04510 CRK38 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04510 CRK38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04510 CRK38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04510 CRK38 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04510 CRK38 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04500 CRK37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04500 CRK37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04500 CRK37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04500 CRK37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04500 CRK37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.128138'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04500 CRK37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.711964'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04490 CRK36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04490 CRK36 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04490 CRK36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04490 CRK36 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04490 CRK36 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04490 CRK36 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '.214393'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 3.84541 x 10-1 12 2 0 0 85.71% 14 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '3.63066'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04470 PMP22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04470 PMP22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04470 PMP22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04470 PMP22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '170.341'
Avg. embryo expression (LCM): '109.888'
AT4G04470 PMP22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '546.438'
Avg. expression score in LCM sample: '438.307'
Tissue used: 'pure endosperm, no chalazal'
AT4G04470 PMP22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '749.469'
Avg. expression score in LCM sample: '438.307'
Tissue used: 'full endosperm'
AT4G04460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3221 x 10-2 681 346 295 765 66.31% 72.17% 1027 1060 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213067'
Avg. expression score for this sample: '30044.7'
Avg. expression score in LCM sample: '52773.9'
Tissue used: 'full endosperm'
AT4G04460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 15 5 13 37.50% 72.22% 24 18 TAIR8 Avg. embryo expression (dissected): '4969.41'
Avg. embryo expression (LCM): '651.627'
AT4G04460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.91616 x 10-1 304 241 151 459 55.78% 75.25% 545 610 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213067'
Avg. expression score for this sample: '65455.1'
Avg. expression score in LCM sample: '52773.9'
Tissue used: 'pure endosperm, no chalazal'
AT4G04460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.645 x 10-3 243 79 75.47% 322 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.23 x 10-4 58 7 89.23% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.55086 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04450 WRKY42 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04450 WRKY42 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04450 WRKY42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 3 0 100.00% 0.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.04265'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'pure endosperm, no chalazal'
AT4G04450 WRKY42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 1 0 100.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.49862'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'full endosperm'
AT4G04450 WRKY42 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.30816'
Avg. embryo expression (LCM): '0'
AT4G04450 WRKY42 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04423 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04423 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04423 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04423 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '4.42204'
Avg. embryo expression (LCM): '0'
AT4G04423 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04423 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.93299'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04404 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.503701'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04404 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.420147'
Avg. embryo expression (LCM): '0'
AT4G04404 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04404 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04404 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04404 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04402 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.21 x 10-4 0 8 0.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04402 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3049 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04402 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.7686 x 10-2 1 14 1 9 6.67% 90.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.716414'
Avg. expression score for this sample: '80.2216'
Avg. expression score in LCM sample: '23.5608'
Tissue used: 'pure endosperm, no chalazal'
AT4G04402 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.67006 x 10-1 0 10 0 31 0.00% 100.00% 10 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.716414'
Avg. expression score for this sample: '84.1865'
Avg. expression score in LCM sample: '23.5608'
Tissue used: 'full endosperm'
AT4G04402 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.67 x 10-3 0 37 0 8 0.00% 100.00% 37 8 TAIR8 Avg. embryo expression (dissected): '168.144'
Avg. embryo expression (LCM): '62.9185'
AT4G04402 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.89177 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.48779 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3829 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-11 73 3 96.05% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.71159 x 10-1 32 19 20 4 62.75% 16.67% 51 24 TAIR8 Avg. embryo expression (dissected): '39.561'
Avg. embryo expression (LCM): '30.982'
AT4G04370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.14832 x 10-1 59 14 32 12 80.82% 27.27% 73 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.067789'
Avg. expression score for this sample: '34.3967'
Avg. expression score in LCM sample: '18.7986'
Tissue used: 'pure endosperm, no chalazal'
AT4G04370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.15832 x 10-1 67 33 48 46 67.00% 48.94% 100 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.067789'
Avg. expression score for this sample: '32.6712'
Avg. expression score in LCM sample: '18.7986'
Tissue used: 'full endosperm'
AT4G04360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.80579 x 10-1 14 0 3 5 100.00% 62.50% 14 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231038'
Avg. expression score for this sample: '78.6573'
Avg. expression score in LCM sample: '15.5945'
Tissue used: 'full endosperm'
AT4G04360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 15 6 2 0 71.43% 0.00% 21 2 TAIR8 Avg. embryo expression (dissected): '203.7'
Avg. embryo expression (LCM): '123.25'
AT4G04360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.07611 x 10-1 24 2 9 5 92.31% 35.71% 26 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231038'
Avg. expression score for this sample: '187.597'
Avg. expression score in LCM sample: '15.5945'
Tissue used: 'pure endosperm, no chalazal'
AT4G04360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.38095 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.38095 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04350 EMB2369 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6626 x 10-2 34 7 82.93% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04350 EMB2369 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7 x 10-5 108 17 86.40% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04350 EMB2369 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.53554 x 10-1 32 19 19 26 62.75% 57.78% 51 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.784025'
Avg. expression score for this sample: '48.1836'
Avg. expression score in LCM sample: '19.7099'
Tissue used: 'pure endosperm, no chalazal'
AT4G04350 EMB2369 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.98246 x 10-1 52 14 35 75 78.79% 68.18% 66 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.784025'
Avg. expression score for this sample: '57.3229'
Avg. expression score in LCM sample: '19.7099'
Tissue used: 'full endosperm'
AT4G04350 EMB2369 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.49823 x 10-1 73 70 22 12 51.05% 35.29% 143 34 TAIR8 Avg. embryo expression (dissected): '150.155'
Avg. embryo expression (LCM): '150.314'
AT4G04350 EMB2369 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.52932 x 10-1 40 17 70.18% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-11 174 13 93.05% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-11 108 3 97.30% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.67 x 10-4 242 55 87 223 81.48% 71.94% 297 310 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000671'
Avg. expression score for this sample: '187.239'
Avg. expression score in LCM sample: '95.1984'
Tissue used: 'full endosperm'
AT4G04340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 98 91 26 20 51.85% 43.48% 189 46 TAIR8 Avg. embryo expression (dissected): '90.3407'
Avg. embryo expression (LCM): '51.0632'
AT4G04340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.18092 x 10-1 221 95 149 338 69.94% 69.40% 316 487 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000671'
Avg. expression score for this sample: '191.209'
Avg. expression score in LCM sample: '95.1984'
Tissue used: 'pure endosperm, no chalazal'
AT4G04330 RbcX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 1 0 0 4 100.00% 100.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.165322'
Avg. expression score for this sample: '4.79704'
Avg. expression score in LCM sample: '6.30541'
Tissue used: 'pure endosperm, no chalazal'
AT4G04330 RbcX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.414744'
Avg. embryo expression (LCM): '1.79588'
AT4G04330 RbcX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.3 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04330 RbcX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.43017 x 10-1 5 0 3 10 100.00% 76.92% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.165322'
Avg. expression score for this sample: '9.64658'
Avg. expression score in LCM sample: '6.30541'
Tissue used: 'full endosperm'
AT4G04330 RbcX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04330 RbcX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.3629 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-4 68 4 94.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.368 x 10-3 65 18 18 79 78.31% 81.44% 83 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025228'
Avg. expression score for this sample: '38.8207'
Avg. expression score in LCM sample: '25.9271'
Tissue used: 'full endosperm'
AT4G04320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-5 95 7 93.14% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.84367 x 10-1 19 11 4 3 63.33% 42.86% 30 7 TAIR8 Avg. embryo expression (dissected): '14.5701'
Avg. embryo expression (LCM): '10.072'
AT4G04320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.92006 x 10-1 44 25 14 41 63.77% 74.55% 69 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025228'
Avg. expression score for this sample: '26.649'
Avg. expression score in LCM sample: '25.9271'
Tissue used: 'pure endosperm, no chalazal'
AT4G04320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.22596 x 10-1 26 6 81.25% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04315 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04315 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'