| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G397339 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.22 x 10-9 | 0 | 67 | 0 | 33 | 0.00% | 100.00% | 67 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-16' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G397339 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 14 | 0 | 4 | 0.00% | 100.00% | 14 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G397297 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 458 | 0 | 432 | 0 | 100.00% | 0.00% | 458 | 432 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G397297 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-5 | 34 | 0 | 30 | 0 | 100.00% | 0.00% | 34 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '9.49e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G397261 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G397261 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 5 | 1 | 1 | 66.67% | 50.00% | 15 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999822' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G397247 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.962534 x 10-1 | 981 | 943 | 1072 | 1054 | 50.99% | 49.58% | 1924 | 2126 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3863117' χ2 p-value for Mo17 x B73: '.6962534' Biased in favor of strain: '' |
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| GRMZM2G397247 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.801706 x 10-1 | 549 | 469 | 262 | 568 | 53.93% | 68.43% | 1018 | 830 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.62e-18' χ2 p-value for Mo17 x B73: '.2801706' Biased in favor of strain: '' |
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| GRMZM2G397190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22097 x 10-2 | 40 | 23 | 41 | 23 | 63.49% | 35.94% | 63 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0322097' χ2 p-value for Mo17 x B73: '.0244489' Biased in favor of strain: 'B73' |
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| GRMZM2G397190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 4 | 9 | 80.00% | 69.23% | 5 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.8445194' Biased in favor of strain: '' |
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| GRMZM2G397044 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.032544 x 10-1 | 125 | 77 | 121 | 102 | 61.88% | 45.74% | 202 | 223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007321' χ2 p-value for Mo17 x B73: '.2032544' Biased in favor of strain: '' |
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| GRMZM2G397044 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.662492 x 10-1 | 30 | 13 | 27 | 32 | 69.77% | 54.24% | 43 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6662492' χ2 p-value for Mo17 x B73: '.0428402' Biased in favor of strain: '' |
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| GRMZM2G396922 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 9 | 0 | 14.29% | 0.00% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G396922 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 2 | 0 | 100.00% | 0.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G396856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.290345 x 10-1 | 39 | 36 | 44 | 26 | 52.00% | 37.14% | 75 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7290345' χ2 p-value for Mo17 x B73: '.0314437' Biased in favor of strain: '' |
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| GRMZM2G396856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.433966 x 10-1 | 27 | 15 | 23 | 13 | 64.29% | 36.11% | 42 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7433966' χ2 p-value for Mo17 x B73: '.0001006' Biased in favor of strain: '' |
||||
| GRMZM2G396846 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1122 | 308 | 966 | 395 | 78.46% | 29.02% | 1430 | 1361 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G396846 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.74 x 10-16 | 254 | 29 | 155 | 104 | 89.75% | 40.15% | 283 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.74e-16' χ2 p-value for Mo17 x B73: '1.42e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G396767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.249159 x 10-1 | 32 | 23 | 37 | 16 | 58.18% | 30.19% | 55 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2249159' χ2 p-value for Mo17 x B73: '.0039195' Biased in favor of strain: '' |
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| GRMZM2G396767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3624 x 10-3 | 37 | 4 | 31 | 5 | 90.24% | 13.89% | 41 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013624' χ2 p-value for Mo17 x B73: '1.85e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G396674 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.973 x 10-3 | 62 | 32 | 72 | 39 | 65.96% | 35.14% | 94 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001973' χ2 p-value for Mo17 x B73: '.0017349' Biased in favor of strain: 'B73' |
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| GRMZM2G396674 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.368 x 10-4 | 89 | 5 | 21 | 13 | 94.68% | 38.24% | 94 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.33e-09' χ2 p-value for Mo17 x B73: '.0004368' Biased in favor of strain: 'B73' |
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| GRMZM2G396640 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1 x 10-5 | 492 | 274 | 310 | 217 | 64.23% | 41.18% | 766 | 527 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.36e-15' χ2 p-value for Mo17 x B73: '.000051' Biased in favor of strain: 'B73' |
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| GRMZM2G396640 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.10866 x 10-2 | 96 | 28 | 77 | 78 | 77.42% | 50.32% | 124 | 155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0110866' χ2 p-value for Mo17 x B73: '.0000159' Biased in favor of strain: '' |
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| GRMZM2G396562 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.6832 x 10-2 | 269 | 172 | 214 | 181 | 61.00% | 45.82% | 441 | 395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.86e-06' χ2 p-value for Mo17 x B73: '.096832' Biased in favor of strain: '' |
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| GRMZM2G396562 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9399 x 10-2 | 368 | 215 | 153 | 384 | 63.12% | 71.51% | 583 | 537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.069399' χ2 p-value for Mo17 x B73: '.0173087' Biased in favor of strain: '' |
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| GRMZM2G396553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.24704 x 10-2 | 555 | 486 | 533 | 369 | 53.31% | 40.91% | 1041 | 902 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0324704' χ2 p-value for Mo17 x B73: '4.75e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G396553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166752 x 10-1 | 86 | 31 | 72 | 69 | 73.50% | 48.94% | 117 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1166752' χ2 p-value for Mo17 x B73: '7.96e-06' Biased in favor of strain: '' |
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| GRMZM2G396541 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.7 x 10-26 | 128 | 6 | 170 | 13 | 95.52% | 7.10% | 134 | 183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.70e-26' χ2 p-value for Mo17 x B73: '3.85e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G396541 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-5 | 164 | 39 | 96 | 69 | 80.79% | 41.82% | 203 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000197' χ2 p-value for Mo17 x B73: '1.28e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G396540 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.44 x 10-6 | 1040 | 767 | 926 | 744 | 57.55% | 44.55% | 1807 | 1670 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.34e-10' χ2 p-value for Mo17 x B73: '8.44e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G396540 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.617526 x 10-1 | 269 | 174 | 302 | 566 | 60.72% | 65.21% | 443 | 868 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0079505' χ2 p-value for Mo17 x B73: '.3617526' Biased in favor of strain: '' |
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| GRMZM2G396527 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 23 | 23 | 23 | 12 | 50.00% | 34.29% | 46 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.062979' Biased in favor of strain: '' |
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| GRMZM2G396527 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 8 | 0.00% | 100.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G396482 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-13 | 36 | 175 | 46 | 146 | 17.06% | 76.04% | 211 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.08e-21' χ2 p-value for Mo17 x B73: '5.32e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G396482 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.276442 x 10-1 | 24 | 10 | 15 | 25 | 70.59% | 62.50% | 34 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6276442' χ2 p-value for Mo17 x B73: '.5761499' Biased in favor of strain: '' |
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| GRMZM2G396477 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.67 x 10-22 | 128 | 0 | 92 | 0 | 100.00% | 0.00% | 128 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-29' χ2 p-value for Mo17 x B73: '8.67e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G396477 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53 x 10-9 | 73 | 0 | 38 | 0 | 100.00% | 0.00% | 73 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-09' χ2 p-value for Mo17 x B73: '2.84e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G396451 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 1 | 2 | 40.00% | 66.67% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G396451 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G396357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.79 x 10-8 | 132 | 55 | 131 | 16 | 70.59% | 10.88% | 187 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-08' χ2 p-value for Mo17 x B73: '2.42e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G396357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.52381 x 10-2 | 47 | 13 | 43 | 9 | 78.33% | 17.31% | 60 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0552381' χ2 p-value for Mo17 x B73: '4.34e-14' Biased in favor of strain: '' |
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| GRMZM2G396350 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.41499 x 10-2 | 33 | 20 | 28 | 3 | 62.26% | 9.68% | 53 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0741499' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: '' |
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| GRMZM2G396350 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G396292 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.012878 x 10-1 | 33 | 32 | 26 | 32 | 50.77% | 55.17% | 65 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9012878' χ2 p-value for Mo17 x B73: '.4307911' Biased in favor of strain: '' |
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| GRMZM2G396292 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 5.8193 x 10-3 | 7 | 12 | 22 | 3 | 36.84% | 12.00% | 19 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0058193' χ2 p-value for Mo17 x B73: '6.70e-09' Biased in favor of strain: '' |
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| GRMZM2G396248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495413 x 10-1 | 31 | 16 | 15 | 24 | 65.96% | 61.54% | 47 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0286714' χ2 p-value for Mo17 x B73: '.1495413' Biased in favor of strain: '' |
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| GRMZM2G396248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.88168 x 10-2 | 317 | 117 | 150 | 358 | 73.04% | 70.47% | 434 | 508 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0048457' χ2 p-value for Mo17 x B73: '.0688168' Biased in favor of strain: '' |
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| GRMZM2G396246 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.72 x 10-9 | 57 | 1 | 36 | 1 | 98.28% | 2.70% | 58 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.94e-13' χ2 p-value for Mo17 x B73: '8.72e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G396246 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7451 x 10-3 | 38 | 0 | 8 | 2 | 100.00% | 20.00% | 38 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: 'B73' |
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| GRMZM2G396231 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.943428 x 10-1 | 767 | 474 | 471 | 432 | 61.80% | 47.84% | 1241 | 903 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.00e-17' χ2 p-value for Mo17 x B73: '.1943428' Biased in favor of strain: '' |
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| GRMZM2G396231 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.42598 x 10-1 | 711 | 320 | 443 | 847 | 68.96% | 65.66% | 1031 | 1290 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1179559' χ2 p-value for Mo17 x B73: '.442598' Biased in favor of strain: '' |
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| GRMZM2G396212 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.658029 x 10-1 | 18 | 28 | 26 | 21 | 39.13% | 44.68% | 46 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1403687' χ2 p-value for Mo17 x B73: '.4658029' Biased in favor of strain: '' |
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| GRMZM2G396212 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G396114 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.40775 x 10-2 | 15 | 27 | 13 | 29 | 35.71% | 69.05% | 42 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0640775' χ2 p-value for Mo17 x B73: '.0135547' Biased in favor of strain: '' |
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| GRMZM2G396114 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 5 | 100.00% | 100.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G396029 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.548165 x 10-1 | 123 | 65 | 77 | 68 | 65.43% | 46.90% | 188 | 145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000234' χ2 p-value for Mo17 x B73: '.4548165' Biased in favor of strain: '' |
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| GRMZM2G396029 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.096288 x 10-1 | 5 | 14 | 13 | 18 | 26.32% | 58.06% | 19 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001906' χ2 p-value for Mo17 x B73: '.3096288' Biased in favor of strain: '' |
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| GRMZM2G395983 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.37 x 10-10 | 174 | 38 | 146 | 55 | 82.08% | 27.36% | 212 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.59e-21' χ2 p-value for Mo17 x B73: '1.37e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G395983 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-16 | 446 | 88 | 239 | 214 | 83.52% | 47.24% | 534 | 453 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.44e-16' χ2 p-value for Mo17 x B73: '1.77e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G395950 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.443998 x 10-1 | 15 | 8 | 18 | 7 | 65.22% | 28.00% | 23 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.0278069' Biased in favor of strain: '' |
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| GRMZM2G395950 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01377 x 10-2 | 26 | 4 | 21 | 11 | 86.67% | 34.38% | 30 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201377' χ2 p-value for Mo17 x B73: '.0001066' Biased in favor of strain: '' |
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| GRMZM2G395853 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 3 | 3 | 60.00% | 50.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G395853 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G395844 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1193 x 10-3 | 2290 | 1611 | 1786 | 1607 | 58.70% | 47.36% | 3901 | 3393 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.58e-27' χ2 p-value for Mo17 x B73: '.0021193' Biased in favor of strain: 'B73' |
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| GRMZM2G395844 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.11 x 10-5 | 3550 | 1560 | 2059 | 3567 | 69.47% | 63.40% | 5110 | 5626 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000211' χ2 p-value for Mo17 x B73: '2.05e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G395842 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.959777 x 10-1 | 118 | 116 | 117 | 120 | 50.43% | 50.63% | 234 | 237 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8959777' χ2 p-value for Mo17 x B73: '.845494' Biased in favor of strain: '' |
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| GRMZM2G395842 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.109474 x 10-1 | 192 | 75 | 150 | 276 | 71.91% | 64.79% | 267 | 426 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0691488' χ2 p-value for Mo17 x B73: '.4109474' Biased in favor of strain: '' |
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| GRMZM2G395749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.69718 x 10-2 | 88 | 61 | 122 | 66 | 59.06% | 35.11% | 149 | 188 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0269718' χ2 p-value for Mo17 x B73: '.0000442' Biased in favor of strain: 'B73' |
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| GRMZM2G395749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.167148 x 10-1 | 98 | 51 | 131 | 131 | 65.77% | 50.00% | 149 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8167148' χ2 p-value for Mo17 x B73: '1.05e-08' Biased in favor of strain: '' |
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| GRMZM2G395736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.842581 x 10-1 | 200 | 215 | 172 | 162 | 48.19% | 48.50% | 415 | 334 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4615353' χ2 p-value for Mo17 x B73: '.5842581' Biased in favor of strain: '' |
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| GRMZM2G395736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.52608 x 10-2 | 125 | 82 | 108 | 133 | 60.39% | 55.19% | 207 | 241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0552608' χ2 p-value for Mo17 x B73: '.0001565' Biased in favor of strain: '' |
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| GRMZM2G395728 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.79 x 10-8 | 0 | 34 | 2 | 35 | 0.00% | 94.59% | 34 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '5.79e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G395728 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 13 | 0.00% | 100.00% | 6 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: '' |
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| GRMZM2G395721 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.135 x 10-3 | 42 | 17 | 70 | 23 | 71.19% | 24.73% | 59 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001135' χ2 p-value for Mo17 x B73: '1.10e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G395721 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 1 | 100.00% | 25.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: '' |
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| GRMZM2G395535 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4732 x 10-3 | 56 | 22 | 53 | 28 | 71.79% | 34.57% | 78 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001182' χ2 p-value for Mo17 x B73: '.0054732' Biased in favor of strain: 'B73' |
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| GRMZM2G395535 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.864275 x 10-1 | 9 | 2 | 13 | 2 | 81.82% | 13.33% | 11 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.0000118' Biased in favor of strain: '' |
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| GRMZM2G395508 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 695 | 137 | 774 | 171 | 83.53% | 18.10% | 832 | 945 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G395508 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.142163 x 10-1 | 27 | 3 | 7 | 20 | 90.00% | 74.07% | 30 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067066' χ2 p-value for Mo17 x B73: '.4142163' Biased in favor of strain: '' |
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| GRMZM2G395354 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.87636 x 10-1 | 648 | 405 | 383 | 413 | 61.54% | 51.88% | 1053 | 796 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.97e-14' χ2 p-value for Mo17 x B73: '.287636' Biased in favor of strain: '' |
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| GRMZM2G395354 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.844715 x 10-1 | 1428 | 671 | 661 | 1634 | 68.03% | 71.20% | 2099 | 2295 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1844715' χ2 p-value for Mo17 x B73: '4.12e-06' Biased in favor of strain: '' |
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| GRMZM2G395247 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.150006 x 10-1 | 14 | 16 | 84 | 260 | 46.67% | 75.58% | 30 | 344 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7150006' χ2 p-value for Mo17 x B73: '2.33e-21' Biased in favor of strain: '' |
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| GRMZM2G395247 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.08192 x 10-1 | 29 | 10 | 112 | 318 | 74.36% | 73.95% | 39 | 430 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.308192' χ2 p-value for Mo17 x B73: '.0013489' Biased in favor of strain: '' |
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| GRMZM2G395244 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63773 x 10-2 | 5 | 16 | 1 | 19 | 23.81% | 95.00% | 21 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163773' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'Mo17' |
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| GRMZM2G395244 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.096 x 10-4 | 0 | 16 | 3 | 38 | 0.00% | 92.68% | 16 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '.0004096' Biased in favor of strain: 'Mo17' |
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| GRMZM2G395236 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 4 | 0 | 50.00% | 0.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G395236 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 0 | 8 | 33.33% | 100.00% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G395121 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.800004 x 10-1 | 84 | 73 | 88 | 102 | 53.50% | 53.68% | 157 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3800004' χ2 p-value for Mo17 x B73: '.3097881' Biased in favor of strain: '' |
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| GRMZM2G395121 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6519 x 10-3 | 239 | 167 | 129 | 356 | 58.87% | 73.40% | 406 | 485 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008562' χ2 p-value for Mo17 x B73: '.0016519' Biased in favor of strain: 'Mo17' |
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| GRMZM2G395114 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.39258 x 10-2 | 984 | 870 | 962 | 1045 | 53.07% | 52.07% | 1854 | 2007 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0081069' χ2 p-value for Mo17 x B73: '.0639258' Biased in favor of strain: '' |
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| GRMZM2G395114 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 1 | 60.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G394973 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.694171 x 10-1 | 15 | 8 | 19 | 18 | 65.22% | 48.65% | 23 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: '' |
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| GRMZM2G394973 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 21 | 8 | 100.00% | 27.59% | 5 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '8.03e-06' Biased in favor of strain: '' |
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| GRMZM2G394962 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.233 x 10-4 | 622 | 423 | 417 | 317 | 59.52% | 43.19% | 1045 | 734 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.46e-10' χ2 p-value for Mo17 x B73: '.0002233' Biased in favor of strain: 'B73' |
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| GRMZM2G394962 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.4766 x 10-3 | 591 | 240 | 525 | 550 | 71.12% | 51.16% | 831 | 1075 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0064766' χ2 p-value for Mo17 x B73: '4.13e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G394876 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G394876 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 0 | 100.00% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G394684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 9 | 0.00% | 100.00% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G394684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |