Displaying data sets 61801 - 61900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G04710 CPK22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '3.47731'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04710 CPK22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Avg. embryo expression (dissected): '6.56791'
Avg. embryo expression (LCM): '3.65455'
AT4G04710 CPK22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04710 CPK22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02564 x 10-1 1 2 4 0 33.33% 0.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '4.12183'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04710 CPK22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04710 CPK22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04700 CPK27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04700 CPK27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '4.73416'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04700 CPK27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04700 CPK27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '3.3853'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04700 CPK27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 0 1 33.33% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '13.1429'
Avg. embryo expression (LCM): '16.4517'
AT4G04700 CPK27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04695 CPK31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04695 CPK31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04695 CPK31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '2.20701'
Avg. embryo expression (LCM): '4.34527'
AT4G04695 CPK31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.78618'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04695 CPK31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 4 1 100.00% 20.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.73309'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04695 CPK31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.318535'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.656632'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'pure endosperm, no chalazal'
AT4G04680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.37173'
Avg. embryo expression (LCM): '3.215'
AT4G04680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.5863'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'full endosperm'
AT4G04680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.28932 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.09054 x 10-1 134 42 76.14% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.30408 x 10-1 33 10 44 86 76.74% 66.15% 43 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650756'
Avg. expression score for this sample: '27.0246'
Avg. expression score in LCM sample: '18.1372'
Tissue used: 'full endosperm'
AT4G04670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.87443 x 10-1 96 53 64.43% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.83095 x 10-1 25 23 10 48 52.08% 82.76% 48 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650756'
Avg. expression score for this sample: '23.8439'
Avg. expression score in LCM sample: '18.1372'
Tissue used: 'pure endosperm, no chalazal'
AT4G04670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.37995 x 10-1 52 67 11 9 43.70% 45.00% 119 20 TAIR8 Avg. embryo expression (dissected): '59.6572'
Avg. embryo expression (LCM): '68.1805'
AT4G04650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.16478'
Avg. embryo expression (LCM): '0'
AT4G04650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 3 2 3 50.00% 60.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.79283'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04640 ATPC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.84669 x 10-1 40 23 63.49% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04640 ATPC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.22205 x 10-1 50 22 69.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04640 ATPC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.52084 x 10-1 138 109 100 275 55.87% 73.33% 247 375 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621063'
Avg. expression score for this sample: '343.373'
Avg. expression score in LCM sample: '236.901'
Tissue used: 'full endosperm'
AT4G04640 ATPC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.79 x 10-4 79 170 32 33 31.73% 50.77% 249 65 TAIR8 Avg. embryo expression (dissected): '482.651'
Avg. embryo expression (LCM): '378.415'
AT4G04640 ATPC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.86601 x 10-1 85 76 30 100 52.80% 76.92% 161 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621063'
Avg. expression score for this sample: '316.229'
Avg. expression score in LCM sample: '236.901'
Tissue used: 'pure endosperm, no chalazal'
AT4G04640 ATPC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.63293 x 10-1 37 14 72.55% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04632 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04632 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.14706 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04632 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 3 0 1 72.73% 100.00% 11 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.22256'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04632 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04632 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '2.2349'
Avg. embryo expression (LCM): '0'
AT4G04632 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0989 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '5.38268'
Avg. embryo expression (LCM): '3.35314'
AT4G04630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.36998'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.471046'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04620 ATG8B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.50253 x 10-1 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04620 ATG8B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6236 x 10-2 41 3 10 19 93.18% 65.52% 44 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133421'
Avg. expression score for this sample: '73.5957'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'full endosperm'
AT4G04620 ATG8B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.28308 x 10-1 5 2 5 1 71.43% 16.67% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133421'
Avg. expression score for this sample: '41.2908'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'pure endosperm, no chalazal'
AT4G04620 ATG8B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.0543'
Avg. embryo expression (LCM): '1.74564'
AT4G04620 ATG8B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-8 104 0 100.00% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04620 ATG8B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.98504 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04614 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.71158 x 10-1 10 6 62.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04614 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9938 x 10-2 31 11 27 96 73.81% 78.05% 42 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.358977'
Avg. expression score for this sample: '666.165'
Avg. expression score in LCM sample: '122.757'
Tissue used: 'full endosperm'
AT4G04614 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.07458 x 10-1 106 42 71.62% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04614 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.86142 x 10-1 68 22 75.56% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04614 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.26173 x 10-1 29 29 12 5 50.00% 29.41% 58 17 TAIR8 Avg. embryo expression (dissected): '423.674'
Avg. embryo expression (LCM): '433.736'
AT4G04614 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.59121 x 10-1 20 19 8 12 51.28% 60.00% 39 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.358977'
Avg. expression score for this sample: '334.361'
Avg. expression score in LCM sample: '122.757'
Tissue used: 'pure endosperm, no chalazal'
AT4G04610 APR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 741 341 186 314 68.48% 62.80% 1082 500 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00739'
Avg. expression score for this sample: '692.045'
Avg. expression score in LCM sample: '554.097'
Tissue used: 'pure endosperm, no chalazal'
AT4G04610 APR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.54977 x 10-1 196 229 13 27 46.12% 67.50% 425 40 TAIR8 Avg. embryo expression (dissected): '280.064'
Avg. embryo expression (LCM): '102.277'
AT4G04610 APR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1793 71 96.19% 1864 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04610 APR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.03271 x 10-1 30 10 75.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04610 APR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.46122 x 10-1 1228 538 69.54% 1766 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04610 APR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.37 x 10-4 671 240 184 475 73.66% 72.08% 911 659 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00739'
Avg. expression score for this sample: '474.653'
Avg. expression score in LCM sample: '554.097'
Tissue used: 'full endosperm'
AT4G04601 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.05778'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04601 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04601 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04601 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04601 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04601 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'full endosperm'
AT4G04580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.518009'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'pure endosperm, no chalazal'
AT4G04580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04570 CRK40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04570 CRK40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04570 CRK40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04570 CRK40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04570 CRK40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04570 CRK40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04540 CRK39 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04540 CRK39 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04540 CRK39 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.550211'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04540 CRK39 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.147147'
Avg. embryo expression (LCM): '0'