Displaying data sets 61601 - 61700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G04990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04985 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 47 12.96% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04985 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04985 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 6.0606 x 10-2 0 6 0 0 0.00% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '.380101'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04985 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-6 23 0 100.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '.95645'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 1 33.33% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '.958944'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.477067'
Avg. embryo expression (LCM): '0'
AT4G04970 GSL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.5107 x 10-1 499 551 165 192 47.52% 53.78% 1050 357 TAIR8 Avg. embryo expression (dissected): '143.523'
Avg. embryo expression (LCM): '89.7185'
AT4G04970 GSL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.50992 x 10-1 710 432 328 830 62.17% 71.68% 1142 1158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08647'
Avg. expression score for this sample: '142.672'
Avg. expression score in LCM sample: '91.8767'
Tissue used: 'pure endosperm, no chalazal'
AT4G04970 GSL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2443 x 10-2 999 491 615 1455 67.05% 70.29% 1490 2070 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08647'
Avg. expression score for this sample: '148.916'
Avg. expression score in LCM sample: '91.8767'
Tissue used: 'full endosperm'
AT4G04970 GSL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 844 53 94.09% 897 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04970 GSL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-28 306 20 93.87% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04970 GSL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.54 x 10-4 235 67 77.81% 302 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2 x 10-10 422 57 88.10% 479 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 881 55 94.12% 936 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.11 x 10-3 230 255 117 751 47.42% 86.52% 485 868 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-37'
Avg. expression score for this sample: '173.483'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'pure endosperm, no chalazal'
AT4G04960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.91947 x 10-1 239 328 84 138 42.15% 62.16% 567 222 TAIR8 Avg. embryo expression (dissected): '186.247'
Avg. embryo expression (LCM): '67.9168'
AT4G04960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 951 87 91.62% 1038 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1322 805 474 3024 62.15% 86.45% 2127 3498 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-37'
Avg. expression score for this sample: '476.782'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'full endosperm'
AT4G04957 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04957 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04957 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04957 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04957 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04957 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04955 ALN embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.18311 x 10-1 15 32 11 9 31.91% 45.00% 47 20 TAIR8 Avg. embryo expression (dissected): '30.4659'
Avg. embryo expression (LCM): '18.1974'
AT4G04955 ALN endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-10 592 29 95.33% 621 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04955 ALN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.83 x 10-4 89 86 31 296 50.86% 90.52% 175 327 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '136.456'
Avg. expression score in LCM sample: '73.7394'
Tissue used: 'pure endosperm, no chalazal'
AT4G04955 ALN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 299 87 108 1451 77.46% 93.07% 386 1559 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '321.653'
Avg. expression score in LCM sample: '73.7394'
Tissue used: 'full endosperm'
AT4G04955 ALN endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6 x 10-12 340 6 98.27% 346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04955 ALN endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2 x 10-9 1199 86 93.31% 1285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04953 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04953 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04953 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04953 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04953 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04953 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04950 GRXS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 50 17 23 30 74.63% 56.60% 67 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043625'
Avg. expression score for this sample: '76.1433'
Avg. expression score in LCM sample: '73.7835'
Tissue used: 'pure endosperm, no chalazal'
AT4G04950 GRXS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5837 x 10-2 128 28 46 105 82.05% 69.54% 156 151 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043625'
Avg. expression score for this sample: '120.667'
Avg. expression score in LCM sample: '73.7835'
Tissue used: 'full endosperm'
AT4G04950 GRXS17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-5 261 41 86.42% 302 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04950 GRXS17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 24 9 72.73% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04950 GRXS17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7005 x 10-2 155 84 64.85% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04950 GRXS17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.43 x 10-4 97 32 11 7 75.19% 38.89% 129 18 TAIR8 Avg. embryo expression (dissected): '109.709'
Avg. embryo expression (LCM): '157.258'
AT4G04940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '55.4399'
Avg. embryo expression (LCM): '82.2084'
AT4G04940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.41758 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '14.4332'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'pure endosperm, no chalazal'
AT4G04940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '16.6664'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'full endosperm'
AT4G04940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.23308 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04930 DES-1-LIKE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.21053 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04930 DES-1-LIKE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04930 DES-1-LIKE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Avg. embryo expression (dissected): '2.46275'
Avg. embryo expression (LCM): '0'
AT4G04930 DES-1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0979 x 10-2 0 0 7 0 0.00% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181141'
Avg. expression score for this sample: '1.94117'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT4G04930 DES-1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04930 DES-1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 4 6 100.00% 60.00% 1 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181141'
Avg. expression score for this sample: '4.50283'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT4G04925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.17646 x 10-1 57 27 27 61 67.86% 69.32% 84 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272173'
Avg. expression score for this sample: '348.502'
Avg. expression score in LCM sample: '200.538'
Tissue used: 'pure endosperm, no chalazal'
AT4G04925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.62464 x 10-1 40 25 16 73 61.54% 82.02% 65 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272173'
Avg. expression score for this sample: '164.918'
Avg. expression score in LCM sample: '200.538'
Tissue used: 'full endosperm'
AT4G04925 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.013 x 10-3 65 8 89.04% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04925 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.76816 x 10-1 103 37 73.57% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04925 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.13131 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04925 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.90903 x 10-1 57 50 19 26 53.27% 57.78% 107 45 TAIR8 Avg. embryo expression (dissected): '459.07'
Avg. embryo expression (LCM): '191.506'
AT4G04920 SFR6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 1 1 66.67% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '76.1412'
Avg. embryo expression (LCM): '71.2197'
AT4G04920 SFR6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.11576 x 10-1 23 3 88.46% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04920 SFR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.152108'
Avg. expression score for this sample: '49.3099'
Avg. expression score in LCM sample: '38.5379'
Tissue used: 'pure endosperm, no chalazal'
AT4G04920 SFR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.7497 x 10-2 14 3 0 9 82.35% 100.00% 17 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.152108'
Avg. expression score for this sample: '53.9383'
Avg. expression score in LCM sample: '38.5379'
Tissue used: 'full endosperm'
AT4G04920 SFR6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04920 SFR6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1442 x 10-2 15 10 60.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04910 NSF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.217 x 10-3 413 239 63.34% 652 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04910 NSF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9 x 10-5 12 22 35.29% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04910 NSF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.914 x 10-3 77 27 14 7 74.04% 33.33% 104 21 TAIR8 Avg. embryo expression (dissected): '53.8879'
Avg. embryo expression (LCM): '54.3661'
AT4G04910 NSF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.5221 x 10-2 226 26 124 163 89.68% 56.79% 252 287 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119906'
Avg. expression score for this sample: '99.1114'
Avg. expression score in LCM sample: '61.9223'
Tissue used: 'full endosperm'
AT4G04910 NSF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-30 847 75 91.87% 922 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04910 NSF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 104 15 57 37 87.39% 39.36% 119 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119906'
Avg. expression score for this sample: '61.6983'
Avg. expression score in LCM sample: '61.9223'
Tissue used: 'pure endosperm, no chalazal'
AT4G04900 RIC10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.549068'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G04900 RIC10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.387427'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G04900 RIC10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04900 RIC10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04900 RIC10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04900 RIC10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G04890 PDF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.65613 x 10-1 420 372 164 120 53.03% 42.25% 792 284 TAIR8 Avg. embryo expression (dissected): '784.36'
Avg. embryo expression (LCM): '675.137'
AT4G04890 PDF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-7 128 26 83.12% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04890 PDF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.3369 x 10-2 192 88 102 107 68.57% 51.20% 280 209 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063747'
Avg. expression score for this sample: '194.057'
Avg. expression score in LCM sample: '24.3985'
Tissue used: 'pure endosperm, no chalazal'
AT4G04890 PDF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.58605 x 10-1 684 251 338 398 73.16% 54.08% 935 736 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063747'
Avg. expression score for this sample: '506.334'
Avg. expression score in LCM sample: '24.3985'
Tissue used: 'full endosperm'
AT4G04890 PDF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-5 71 12 85.54% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04890 PDF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.396 x 10-3 168 133 55.81% 301 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04885 PCFS4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04885 PCFS4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04885 PCFS4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '185'
Avg. embryo expression (LCM): '139.538'
AT4G04885 PCFS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '127.356'
Avg. expression score in LCM sample: '80.7063'
Tissue used: 'full endosperm'
AT4G04885 PCFS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G04885 PCFS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '143.904'
Avg. expression score in LCM sample: '80.7063'
Tissue used: 'pure endosperm, no chalazal'
AT4G04880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 3 1 80.00% 25.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.13926'
Avg. expression score in LCM sample: '2.23408'
Tissue used: 'pure endosperm, no chalazal'
AT4G04880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 1 8 8 90.91% 50.00% 11 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.36917'
Avg. expression score in LCM sample: '2.23408'
Tissue used: 'full endosperm'