| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G399921 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22 x 10-9 | 37 | 1 | 43 | 0 | 97.37% | 0.00% | 38 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.22e-09' χ2 p-value for Mo17 x B73: '5.47e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G399921 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.37 x 10-5 | 91 | 43 | 121 | 49 | 67.91% | 28.82% | 134 | 170 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000337' χ2 p-value for Mo17 x B73: '3.35e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G399877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.38948 x 10-2 | 46 | 38 | 60 | 84 | 54.76% | 58.33% | 84 | 144 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0206348' χ2 p-value for Mo17 x B73: '.0338948' Biased in favor of strain: '' |
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| GRMZM2G399858 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.572726 x 10-1 | 73 | 58 | 64 | 54 | 55.73% | 45.76% | 131 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1900078' χ2 p-value for Mo17 x B73: '.3572726' Biased in favor of strain: '' |
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| GRMZM2G399858 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316144 x 10-1 | 12 | 5 | 15 | 37 | 70.59% | 71.15% | 17 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7316144' χ2 p-value for Mo17 x B73: '.492457' Biased in favor of strain: '' |
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| GRMZM2G399750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.958215 x 10-1 | 57 | 44 | 59 | 31 | 56.44% | 34.44% | 101 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1958215' χ2 p-value for Mo17 x B73: '.0031628' Biased in favor of strain: '' |
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| GRMZM2G399750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999996 x 10-1 | 43 | 40 | 18 | 36 | 51.81% | 66.67% | 83 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040813' χ2 p-value for Mo17 x B73: '.9999996' Biased in favor of strain: '' |
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| GRMZM2G399700 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.433 x 10-4 | 67 | 21 | 61 | 29 | 76.14% | 32.22% | 88 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.41e-07' χ2 p-value for Mo17 x B73: '.0007433' Biased in favor of strain: 'B73' |
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| GRMZM2G399700 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.61925 x 10-2 | 29 | 6 | 22 | 26 | 82.86% | 54.17% | 35 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0421671' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
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| GRMZM2G399677 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 11 | 9 | 15 | 11 | 55.00% | 42.31% | 20 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: '' |
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| GRMZM2G399677 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733281 x 10-1 | 12 | 3 | 18 | 12 | 80.00% | 40.00% | 15 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2733281' χ2 p-value for Mo17 x B73: '.0019458' Biased in favor of strain: '' |
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| GRMZM2G399644 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.927167 x 10-1 | 10 | 27 | 15 | 19 | 27.03% | 55.88% | 37 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0051935' χ2 p-value for Mo17 x B73: '.4927167' Biased in favor of strain: '' |
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| GRMZM2G399644 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 8 | 7 | 50.00% | 46.67% | 8 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: '' |
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| GRMZM2G399641 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 1 | 66.67% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G399641 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399495 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.44353 x 10-2 | 148 | 60 | 83 | 60 | 71.15% | 41.96% | 208 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-09' χ2 p-value for Mo17 x B73: '.0544353' Biased in favor of strain: '' |
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| GRMZM2G399495 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.24193 x 10-2 | 126 | 15 | 34 | 38 | 89.36% | 52.78% | 141 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-08' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G399433 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.112 x 10-4 | 64 | 18 | 54 | 23 | 78.05% | 29.87% | 82 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.78e-07' χ2 p-value for Mo17 x B73: '.0004112' Biased in favor of strain: 'B73' |
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| GRMZM2G399433 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999723 x 10-1 | 24 | 12 | 40 | 15 | 66.67% | 27.27% | 36 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999723' χ2 p-value for Mo17 x B73: '5.74e-10' Biased in favor of strain: '' |
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| GRMZM2G399421 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
||||||
| GRMZM2G399421 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G399325 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399325 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399320 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-25 | 353 | 89 | 306 | 98 | 79.86% | 24.26% | 442 | 404 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.63e-36' χ2 p-value for Mo17 x B73: '4.26e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G399320 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.45 x 10-21 | 323 | 36 | 215 | 109 | 89.97% | 33.64% | 359 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.45e-21' χ2 p-value for Mo17 x B73: '1.86e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G399218 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 21 | 24 | 33 | 22 | 46.67% | 40.00% | 45 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.1380107' Biased in favor of strain: '' |
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| GRMZM2G399218 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399212 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.586874 x 10-1 | 43 | 39 | 32 | 22 | 52.44% | 40.74% | 82 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6586874' χ2 p-value for Mo17 x B73: '.1735682' Biased in favor of strain: '' |
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| GRMZM2G399212 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.074788 x 10-1 | 25 | 12 | 7 | 15 | 67.57% | 68.18% | 37 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9074788' χ2 p-value for Mo17 x B73: '.8801686' Biased in favor of strain: '' |
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| GRMZM2G399183 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 10 | 0 | 14 | 2 | 100.00% | 12.50% | 10 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: 'B73' |
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| GRMZM2G399183 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-7 | 54 | 1 | 27 | 0 | 98.18% | 0.00% | 55 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.12e-07' χ2 p-value for Mo17 x B73: '2.00e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G399136 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.815113 x 10-1 | 4 | 7 | 7 | 6 | 36.36% | 46.15% | 11 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: '' |
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| GRMZM2G399136 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 7 | 4 | 100.00% | 36.36% | 2 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0330062' Biased in favor of strain: '' |
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| GRMZM2G399112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.52 x 10-7 | 178 | 94 | 171 | 76 | 65.44% | 30.77% | 272 | 247 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.52e-07' χ2 p-value for Mo17 x B73: '1.50e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G399112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.47 x 10-6 | 134 | 25 | 70 | 50 | 84.28% | 41.67% | 159 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.47e-06' χ2 p-value for Mo17 x B73: '6.27e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G399087 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399087 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 8 | 0.00% | 100.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G399073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2405 | 973 | 1962 | 1084 | 71.20% | 35.59% | 3378 | 3046 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G399073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4359 | 651 | 2221 | 1222 | 87.01% | 35.49% | 5010 | 3443 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G399048 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 28 | 0 | 30 | 0 | 100.00% | 0.00% | 28 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G399048 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399031 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G399031 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G398848 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.333557 x 10-1 | 90 | 52 | 76 | 62 | 63.38% | 44.93% | 142 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014282' χ2 p-value for Mo17 x B73: '.2333557' Biased in favor of strain: '' |
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| GRMZM2G398848 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.49563 x 10-2 | 17 | 2 | 19 | 6 | 89.47% | 24.00% | 19 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0349563' χ2 p-value for Mo17 x B73: '6.03e-06' Biased in favor of strain: '' |
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| GRMZM2G398825 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.249159 x 10-1 | 32 | 23 | 26 | 17 | 58.18% | 39.53% | 55 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2249159' χ2 p-value for Mo17 x B73: '.1699118' Biased in favor of strain: '' |
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| GRMZM2G398825 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518298 x 10-1 | 10 | 4 | 6 | 14 | 71.43% | 70.00% | 14 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.7518298' Biased in favor of strain: '' |
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| GRMZM2G398781 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 4 | 0 | 100.00% | 0.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G398781 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 0 | 0 | 0 | 100.00% | 17 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G398755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.11 x 10-9 | 405 | 253 | 463 | 295 | 61.55% | 38.92% | 658 | 758 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.11e-09' χ2 p-value for Mo17 x B73: '1.05e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G398755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.912678 x 10-1 | 231 | 119 | 154 | 298 | 66.00% | 65.93% | 350 | 452 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7912678' χ2 p-value for Mo17 x B73: '.7394392' Biased in favor of strain: '' |
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| GRMZM2G398736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.8161 x 10-3 | 189 | 102 | 183 | 128 | 64.95% | 41.16% | 291 | 311 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.40e-07' χ2 p-value for Mo17 x B73: '.0018161' Biased in favor of strain: 'B73' |
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| GRMZM2G398736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 729 | 117 | 299 | 178 | 86.17% | 37.32% | 846 | 477 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.36e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G398731 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 8 | 0 | 76.92% | 0.00% | 13 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G398731 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.419384 x 10-1 | 29 | 9 | 11 | 26 | 76.32% | 70.27% | 38 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2070346' χ2 p-value for Mo17 x B73: '.6419384' Biased in favor of strain: '' |
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| GRMZM2G398668 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 3 | 0 | 100.00% | 0.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G398668 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G398628 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.115 x 10-4 | 21 | 0 | 13 | 0 | 100.00% | 0.00% | 21 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.59e-06' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'B73' |
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| GRMZM2G398628 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1938 x 10-3 | 21 | 0 | 19 | 2 | 100.00% | 9.52% | 21 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '2.78e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G398527 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.243669 x 10-1 | 247 | 194 | 180 | 152 | 56.01% | 45.78% | 441 | 332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116091' χ2 p-value for Mo17 x B73: '.1243669' Biased in favor of strain: '' |
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| GRMZM2G398527 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.190179 x 10-1 | 91 | 59 | 93 | 108 | 60.67% | 53.73% | 150 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1190179' χ2 p-value for Mo17 x B73: '.0001001' Biased in favor of strain: '' |
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| GRMZM2G398506 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.66 x 10-18 | 307 | 96 | 234 | 81 | 76.18% | 25.71% | 403 | 315 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.72e-26' χ2 p-value for Mo17 x B73: '6.66e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G398506 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53 x 10-9 | 327 | 77 | 147 | 149 | 80.94% | 50.34% | 404 | 296 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-09' χ2 p-value for Mo17 x B73: '2.53e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G398500 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2611 x 10-3 | 107 | 70 | 131 | 91 | 60.45% | 40.99% | 177 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0054177' χ2 p-value for Mo17 x B73: '.0072611' Biased in favor of strain: 'B73' |
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| GRMZM2G398500 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.103725 x 10-1 | 40 | 18 | 22 | 50 | 68.97% | 69.44% | 58 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7103725' χ2 p-value for Mo17 x B73: '.6170754' Biased in favor of strain: '' |
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| GRMZM2G398458 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 4 | 0 | 100.00% | 0.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G398458 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G398423 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4 x 10-6 | 117 | 57 | 122 | 58 | 67.24% | 32.22% | 174 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.40e-06' χ2 p-value for Mo17 x B73: '1.84e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G398423 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.52381 x 10-2 | 47 | 13 | 40 | 26 | 78.33% | 39.39% | 60 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0552381' χ2 p-value for Mo17 x B73: '2.60e-06' Biased in favor of strain: '' |
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| GRMZM2G398288 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.418144 x 10-1 | 170 | 111 | 132 | 117 | 60.50% | 46.99% | 281 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004321' χ2 p-value for Mo17 x B73: '.3418144' Biased in favor of strain: '' |
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| GRMZM2G398288 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.798111 x 10-1 | 146 | 64 | 117 | 153 | 69.52% | 56.67% | 210 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3798111' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: '' |
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| GRMZM2G398275 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.6329 x 10-3 | 14 | 3 | 14 | 3 | 82.35% | 17.65% | 17 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.0076329' Biased in favor of strain: 'B73' |
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| GRMZM2G398275 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 2 | 4 | 25.00% | 66.67% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G398135 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15563 x 10-2 | 37 | 73 | 51 | 77 | 33.64% | 60.16% | 110 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005981' χ2 p-value for Mo17 x B73: '.0215563' Biased in favor of strain: 'Mo17' |
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| GRMZM2G398135 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.85 x 10-6 | 161 | 20 | 52 | 41 | 88.95% | 44.09% | 181 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.02e-10' χ2 p-value for Mo17 x B73: '3.85e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G398055 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.44 x 10-6 | 206 | 99 | 172 | 96 | 67.54% | 35.82% | 305 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.97e-10' χ2 p-value for Mo17 x B73: '3.44e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G398055 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.02775 x 10-2 | 102 | 32 | 71 | 38 | 76.12% | 34.86% | 134 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0202775' χ2 p-value for Mo17 x B73: '1.87e-12' Biased in favor of strain: '' |
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| GRMZM2G398024 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 7 | 0 | 100.00% | 0.00% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G398024 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 8 | 0 | 100.00% | 0.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G397948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.73076 x 10-2 | 565 | 449 | 414 | 363 | 55.72% | 46.72% | 1014 | 777 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002697' χ2 p-value for Mo17 x B73: '.0673076' Biased in favor of strain: '' |
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| GRMZM2G397948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.829923 x 10-1 | 568 | 240 | 279 | 552 | 70.30% | 66.43% | 808 | 831 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0286002' χ2 p-value for Mo17 x B73: '.8829923' Biased in favor of strain: '' |
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| GRMZM2G397927 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.41499 x 10-2 | 154 | 29 | 20 | 33 | 84.15% | 62.26% | 183 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-20' χ2 p-value for Mo17 x B73: '.0741499' Biased in favor of strain: '' |
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| GRMZM2G397927 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.41 x 10-8 | 1157 | 219 | 217 | 263 | 84.08% | 54.79% | 1376 | 480 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.41e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G397836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2242 x 10-3 | 265 | 195 | 196 | 137 | 57.61% | 41.14% | 460 | 333 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010994' χ2 p-value for Mo17 x B73: '.0012242' Biased in favor of strain: 'B73' |
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| GRMZM2G397836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.58273 x 10-2 | 237 | 90 | 135 | 200 | 72.48% | 59.70% | 327 | 335 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0258273' χ2 p-value for Mo17 x B73: '.0068441' Biased in favor of strain: '' |
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| GRMZM2G397785 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1 | 169 | 5 | 177 | 0.59% | 97.25% | 170 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.47e-38' χ2 p-value for Mo17 x B73: '3.14e-37' Biased in favor of strain: 'Mo17' |
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| GRMZM2G397785 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.06 x 10-24 | 0 | 105 | 3 | 219 | 0.00% | 98.65% | 105 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.06e-24' Biased in favor of strain: 'Mo17' |
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| GRMZM2G397755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G397755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G397687 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5685 | 159 | 1136 | 214 | 97.28% | 15.85% | 5844 | 1350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G397687 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 26621 | 940 | 4091 | 1846 | 96.59% | 31.09% | 27561 | 5937 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G397684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.176341 x 10-1 | 40 | 46 | 17 | 71 | 46.51% | 80.68% | 86 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5176341' χ2 p-value for Mo17 x B73: '8.59e-09' Biased in favor of strain: '' |
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| GRMZM2G397684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.82 x 10-5 | 99 | 18 | 47 | 37 | 84.62% | 44.05% | 117 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000382' χ2 p-value for Mo17 x B73: '.0000109' Biased in favor of strain: 'B73' |
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| GRMZM2G397675 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 13 | 19 | 9 | 13 | 40.62% | 59.09% | 32 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2888444' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
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| GRMZM2G397675 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G397651 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.7918 x 10-2 | 186 | 63 | 91 | 70 | 74.70% | 43.48% | 249 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.45e-15' χ2 p-value for Mo17 x B73: '.097918' Biased in favor of strain: '' |
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| GRMZM2G397651 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.96402 x 10-2 | 191 | 136 | 117 | 193 | 58.41% | 62.26% | 327 | 310 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015378' χ2 p-value for Mo17 x B73: '.0996402' Biased in favor of strain: '' |
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| GRMZM2G397557 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 2 | 2 | 33.33% | 50.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G397557 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |