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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G08351 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08351 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G08351 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08351 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08350 GTA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.67263 x 10-1 286 97 74.67% 383 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08350 GTA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.9852 x 10-1 17 29 7 12 36.96% 63.16% 46 19 TAIR8 Avg. embryo expression (dissected): '258.346'
Avg. embryo expression (LCM): '220.717'
AT4G08350 GTA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.60935 x 10-1 29 14 16 41 67.44% 71.93% 43 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007745'
Avg. expression score for this sample: '253.634'
Avg. expression score in LCM sample: '141.85'
Tissue used: 'pure endosperm, no chalazal'
AT4G08350 GTA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-5 277 48 85.23% 325 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08350 GTA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.682 x 10-3 141 50 84 249 73.82% 74.77% 191 333 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007745'
Avg. expression score for this sample: '362.01'
Avg. expression score in LCM sample: '141.85'
Tissue used: 'full endosperm'
AT4G08350 GTA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.6 x 10-5 51 2 96.23% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08345 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08345 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08345 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G08345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G08345 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.64686 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8084 x 10-1 16 3 3 4 84.21% 57.14% 19 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '26.0577'
Avg. expression score in LCM sample: '12.5667'
Tissue used: 'full endosperm'
AT4G08330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 2 2 0 33.33% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '14.0216'
Avg. embryo expression (LCM): '20.1314'
AT4G08330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 6 0 1 2 100.00% 66.67% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '14.6328'
Avg. expression score in LCM sample: '12.5667'
Tissue used: 'pure endosperm, no chalazal'
AT4G08330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08320 TPR8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08320 TPR8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '80.8805'
Avg. embryo expression (LCM): '41.2047'
AT4G08320 TPR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.2115'
Avg. expression score in LCM sample: '21.2238'
Tissue used: 'pure endosperm, no chalazal'
AT4G08320 TPR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '83.6417'
Avg. expression score in LCM sample: '21.2238'
Tissue used: 'full endosperm'
AT4G08320 TPR8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08320 TPR8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.727 x 10-3 254 72 77.91% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02589 x 10-1 1343 914 783 2288 59.50% 74.50% 2257 3071 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-08'
Avg. expression score for this sample: '1550.6'
Avg. expression score in LCM sample: '109.808'
Tissue used: 'pure endosperm, no chalazal'
AT4G08310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0932 x 10-2 748 265 73.84% 1013 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.27078 x 10-1 941 1043 303 358 47.43% 54.16% 1984 661 TAIR8 Avg. embryo expression (dissected): '1274.86'
Avg. embryo expression (LCM): '821.482'
AT4G08310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-25 1030 205 83.40% 1235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-9 2055 1153 701 2604 64.06% 78.79% 3208 3305 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-08'
Avg. expression score for this sample: '1780.33'
Avg. expression score in LCM sample: '109.808'
Tissue used: 'full endosperm'
AT4G08300 UMAMIT17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 16 5 26 44.83% 83.87% 29 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.4789'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G08300 UMAMIT17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08300 UMAMIT17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5893 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08300 UMAMIT17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.606098'
Avg. embryo expression (LCM): '0'
AT4G08300 UMAMIT17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.34246'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08300 UMAMIT17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08290 UMAMIT20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08290 UMAMIT20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 1 2 42.86% 66.67% 7 3 TAIR8 Avg. embryo expression (dissected): '10.9658'
Avg. embryo expression (LCM): '.841425'
AT4G08290 UMAMIT20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08290 UMAMIT20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4293 x 10-2 99 64 54 216 60.74% 80.00% 163 270 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025175'
Avg. expression score for this sample: '287.178'
Avg. expression score in LCM sample: '56.7193'
Tissue used: 'full endosperm'
AT4G08290 UMAMIT20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.83561 x 10-1 31 38 32 146 44.93% 82.02% 69 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025175'
Avg. expression score for this sample: '219.054'
Avg. expression score in LCM sample: '56.7193'
Tissue used: 'pure endosperm, no chalazal'
AT4G08290 UMAMIT20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.1206 x 10-2 48 10 82.76% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.37766 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31799 x 10-1 20 7 5 3 74.07% 37.50% 27 8 TAIR8 Avg. embryo expression (dissected): '50.1611'
Avg. embryo expression (LCM): '23.9366'
AT4G08280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.21013 x 10-1 20 9 68.97% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 2 10 7 88.24% 41.18% 17 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.538522'
Avg. expression score for this sample: '27.5709'
Avg. expression score in LCM sample: '14.9478'
Tissue used: 'pure endosperm, no chalazal'
AT4G08280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2 x 10-5 43 1 97.73% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.32657 x 10-1 26 7 9 20 78.79% 68.97% 33 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.538522'
Avg. expression score for this sample: '56.0284'
Avg. expression score in LCM sample: '14.9478'
Tissue used: 'full endosperm'
AT4G08270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G08270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G08260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.62954'
Avg. embryo expression (LCM): '0'
AT4G08260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.31045'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G08260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.21141'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.19845 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 11 10 7 3 52.38% 30.00% 21 10 TAIR8 Avg. embryo expression (dissected): '28.7714'
Avg. embryo expression (LCM): '15.5852'
AT4G08250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.4156 x 10-1 19 4 17 12 82.61% 41.38% 23 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480024'
Avg. expression score for this sample: '34.3598'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'pure endosperm, no chalazal'
AT4G08250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.43 x 10-4 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.44576 x 10-1 26 8 13 10 76.47% 43.48% 34 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480024'
Avg. expression score for this sample: '27.726'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'full endosperm'
AT4G08240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.25 x 10-4 280 87 87 249 76.29% 74.11% 367 336 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003494'
Avg. expression score for this sample: '272.185'
Avg. expression score in LCM sample: '403.664'
Tissue used: 'full endosperm'
AT4G08240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.24977 x 10-1 219 94 100 197 69.97% 66.33% 313 297 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003494'
Avg. expression score for this sample: '343.437'
Avg. expression score in LCM sample: '403.664'
Tissue used: 'pure endosperm, no chalazal'
AT4G08240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-17 436 48 90.08% 484 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.768 x 10-3 108 70 60.67% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.06841 x 10-1 158 118 55 44 57.25% 44.44% 276 99 TAIR8 Avg. embryo expression (dissected): '329.123'
Avg. embryo expression (LCM): '304.332'
AT4G08240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-15 345 38 90.08% 383 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.418 x 10-3 145 18 88.96% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.99502 x 10-1 17 51 8 47 25.00% 85.45% 68 55 TAIR8 Avg. embryo expression (dissected): '247.693'
Avg. embryo expression (LCM): '45.1858'
AT4G08230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.85 x 10-4 195 22 89.86% 217 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9 x 10-12 141 39 63 371 78.33% 85.48% 180 434 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-11'
Avg. expression score for this sample: '358.061'
Avg. expression score in LCM sample: '81.5293'
Tissue used: 'full endosperm'
AT4G08230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.8285 x 10-2 65 44 42 189 59.63% 81.82% 109 231 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-11'
Avg. expression score for this sample: '350.842'
Avg. expression score in LCM sample: '81.5293'
Tissue used: 'pure endosperm, no chalazal'
AT4G08230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1956 x 10-2 76 7 91.57% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 1 3 37.50% 75.00% 8 4 TAIR8 Avg. embryo expression (dissected): '8.38739'
Avg. embryo expression (LCM): '16.4643'
AT4G08210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.50535'
Avg. expression score in LCM sample: '3.57159'
Tissue used: 'pure endosperm, no chalazal'
AT4G08210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8658 x 10-2 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 6 0 10 45.45% 100.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.6906'
Avg. expression score in LCM sample: '3.57159'
Tissue used: 'full endosperm'
AT4G08190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.438657'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G08190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.04048'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G08190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G08180 ORP1C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.47 x 10-4 121 326 36 122 27.07% 77.22% 447 158 TAIR8 Avg. embryo expression (dissected): '218.304'
Avg. embryo expression (LCM): '139.074'
AT4G08180 ORP1C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8 x 10-23 837 102 89.14% 939 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08180 ORP1C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-12 793 137 85.27% 930 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G08180 ORP1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6 x 10-13 412 315 195 1249 56.67% 86.50% 727 1444 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-11'
Avg. expression score for this sample: '324.135'
Avg. expression score in LCM sample: '125.77'
Tissue used: 'full endosperm'
AT4G08180 ORP1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42859 x 10-1 166 174 75 402 48.82% 84.28% 340 477 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-11'
Avg. expression score for this sample: '208.267'
Avg. expression score in LCM sample: '125.77'
Tissue used: 'pure endosperm, no chalazal'
AT4G08180 ORP1C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4 x 10-9 231 26 89.88% 257 TAIR8 Mutant effect: 'N/A (not a MEG)'