| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G402653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.797125 x 10-1 | 27 | 38 | 18 | 27 | 41.54% | 60.00% | 65 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1724473' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G402653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.013673 x 10-1 | 27 | 9 | 27 | 44 | 75.00% | 61.97% | 36 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2888557' χ2 p-value for Mo17 x B73: '.4013673' Biased in favor of strain: '' |
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| GRMZM2G402631 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 4 | 0 | 100.00% | 0.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G402631 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G402584 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.372538 x 10-1 | 154 | 129 | 141 | 101 | 54.42% | 41.74% | 283 | 242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1372538' χ2 p-value for Mo17 x B73: '.0101318' Biased in favor of strain: '' |
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| GRMZM2G402584 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.02056 x 10-1 | 97 | 22 | 43 | 80 | 81.51% | 65.04% | 119 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005916' χ2 p-value for Mo17 x B73: '.702056' Biased in favor of strain: '' |
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| GRMZM2G402564 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28 x 10-25 | 465 | 196 | 681 | 288 | 70.35% | 29.72% | 661 | 969 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.28e-25' χ2 p-value for Mo17 x B73: '1.54e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G402564 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.427815 x 10-1 | 126 | 22 | 18 | 27 | 85.14% | 60.00% | 148 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.88e-06' χ2 p-value for Mo17 x B73: '.3427815' Biased in favor of strain: '' |
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| GRMZM2G402493 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.16 x 10-16 | 860 | 553 | 691 | 353 | 60.86% | 33.81% | 1413 | 1044 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.16e-16' χ2 p-value for Mo17 x B73: '1.31e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G402493 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-18 | 287 | 32 | 155 | 51 | 89.97% | 24.76% | 319 | 206 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.06e-18' χ2 p-value for Mo17 x B73: '2.74e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G402417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.28 x 10-23 | 128 | 11 | 209 | 25 | 92.09% | 10.68% | 139 | 234 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-23' χ2 p-value for Mo17 x B73: '2.52e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G402417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 7 | 77.78% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G402341 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.503158 x 10-1 | 77 | 81 | 48 | 65 | 48.73% | 57.52% | 158 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7503158' χ2 p-value for Mo17 x B73: '.1097705' Biased in favor of strain: '' |
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| GRMZM2G402341 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.292964 x 10-1 | 116 | 56 | 64 | 76 | 67.44% | 54.29% | 172 | 140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8292964' χ2 p-value for Mo17 x B73: '.0018862' Biased in favor of strain: '' |
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| GRMZM2G402307 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.282919 x 10-1 | 80 | 54 | 55 | 47 | 59.70% | 46.08% | 134 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0247003' χ2 p-value for Mo17 x B73: '.4282919' Biased in favor of strain: '' |
||||
| GRMZM2G402307 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.246063 x 10-1 | 45 | 32 | 29 | 72 | 58.44% | 71.29% | 77 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1257421' χ2 p-value for Mo17 x B73: '.3246063' Biased in favor of strain: '' |
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| GRMZM2G402262 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 7 | 4 | 15 | 12.50% | 78.95% | 8 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: '' |
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| GRMZM2G402262 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G402088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.72691 x 10-2 | 144 | 102 | 159 | 128 | 58.54% | 44.60% | 246 | 287 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0074103' χ2 p-value for Mo17 x B73: '.0672691' Biased in favor of strain: '' |
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| GRMZM2G402088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.554937 x 10-1 | 63 | 24 | 59 | 58 | 72.41% | 49.57% | 87 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2554937' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: '' |
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| GRMZM2G402002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.797125 x 10-1 | 24 | 6 | 7 | 13 | 80.00% | 65.00% | 30 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001015' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
||||
| GRMZM2G402002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173186 x 10-1 | 14 | 4 | 18 | 9 | 77.78% | 33.33% | 18 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173186' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: '' |
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| GRMZM2G401869 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.11748 x 10-2 | 92 | 65 | 92 | 58 | 58.60% | 38.67% | 157 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0311748' χ2 p-value for Mo17 x B73: '.0055017' Biased in favor of strain: 'B73' |
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| GRMZM2G401869 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.801328 x 10-1 | 203 | 66 | 79 | 152 | 75.46% | 65.80% | 269 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022063' χ2 p-value for Mo17 x B73: '.7801328' Biased in favor of strain: '' |
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| GRMZM2G401848 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 5 | 7 | 100.00% | 58.33% | 5 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G401848 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.66 x 10-18 | 151 | 0 | 101 | 16 | 100.00% | 13.68% | 151 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.66e-18' χ2 p-value for Mo17 x B73: '5.13e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G401835 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.51584 x 10-2 | 5 | 21 | 16 | 33 | 19.23% | 67.35% | 26 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017019' χ2 p-value for Mo17 x B73: '.0151584' Biased in favor of strain: 'Mo17' |
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| GRMZM2G401835 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.72425 x 10-2 | 14 | 41 | 37 | 47 | 25.45% | 55.95% | 55 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.96e-11' χ2 p-value for Mo17 x B73: '.0372425' Biased in favor of strain: '' |
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| GRMZM2G401831 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 1 | 0 | 25.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G401831 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G401821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.87817 x 10-2 | 15 | 3 | 9 | 19 | 83.33% | 67.86% | 18 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G401821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.257863 x 10-1 | 4 | 18 | 21 | 27 | 18.18% | 56.25% | 22 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.41e-06' χ2 p-value for Mo17 x B73: '.1257863' Biased in favor of strain: '' |
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| GRMZM2G401581 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 11394 | 1132 | 10327 | 1071 | 90.96% | 9.40% | 12526 | 11398 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G401581 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1959 | 164 | 1341 | 383 | 92.28% | 22.22% | 2123 | 1724 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G401561 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 241 | 27 | 217 | 27 | 89.93% | 11.07% | 268 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.86e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G401561 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 347 | 18 | 208 | 57 | 95.07% | 21.51% | 365 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.17e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G401511 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 5 | 4 | 100.00% | 44.44% | 12 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G401511 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G401374 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 90 | 47 | 464 | 464 | 65.69% | 50.00% | 137 | 928 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000239' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G401374 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.300799 x 10-1 | 43 | 22 | 389 | 367 | 66.15% | 48.54% | 65 | 756 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9300799' χ2 p-value for Mo17 x B73: '4.11e-26' Biased in favor of strain: '' |
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| GRMZM2G401339 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.41 x 10-7 | 67 | 21 | 80 | 20 | 76.14% | 20.00% | 88 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.41e-07' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G401339 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 5 | 1 | 100.00% | 16.67% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G401331 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 1 | 80.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G401331 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G401328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 10 | 0 | 100.00% | 0.00% | 7 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G401328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.403796 x 10-1 | 68 | 24 | 202 | 166 | 73.91% | 45.11% | 92 | 368 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1403796' χ2 p-value for Mo17 x B73: '1.74e-18' Biased in favor of strain: '' |
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| GRMZM2G401308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 20369 | 11156 | 19553 | 12289 | 64.61% | 38.59% | 31525 | 31842 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G401308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 5363 | 7732 | 8460 | 5424 | 40.95% | 39.07% | 13095 | 13884 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G401267 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.364 x 10-4 | 155 | 61 | 107 | 58 | 71.76% | 35.15% | 216 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.60e-10' χ2 p-value for Mo17 x B73: '.0001364' Biased in favor of strain: 'B73' |
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| GRMZM2G401267 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.53 x 10-7 | 93 | 11 | 62 | 45 | 89.42% | 42.06% | 104 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.53e-07' χ2 p-value for Mo17 x B73: '6.65e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G401147 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.00745 x 10-2 | 47 | 27 | 45 | 15 | 63.51% | 25.00% | 74 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0200745' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: 'B73' |
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| GRMZM2G401147 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1701 x 10-3 | 15 | 0 | 23 | 5 | 100.00% | 17.86% | 15 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '4.28e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G401139 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 806 | 322 | 535 | 206 | 71.45% | 27.80% | 1128 | 741 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.25e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G401139 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 703 | 86 | 334 | 191 | 89.10% | 36.38% | 789 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G401062 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-5 | 572 | 433 | 444 | 301 | 56.92% | 40.40% | 1005 | 745 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000116' χ2 p-value for Mo17 x B73: '1.61e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G401062 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73482 x 10-1 | 396 | 175 | 289 | 407 | 69.35% | 58.48% | 571 | 696 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.173482' χ2 p-value for Mo17 x B73: '4.58e-06' Biased in favor of strain: '' |
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| GRMZM2G401009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 2 | 100.00% | 100.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G401009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G400965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.78 x 10-26 | 15 | 151 | 30 | 235 | 9.04% | 88.68% | 166 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.78e-26' χ2 p-value for Mo17 x B73: '2.31e-36' Biased in favor of strain: 'Mo17' |
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| GRMZM2G400965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 5 | 9 | 37.50% | 64.29% | 8 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.8501066' Biased in favor of strain: '' |
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| GRMZM2G400938 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.376 x 10-4 | 133 | 64 | 111 | 61 | 67.51% | 35.47% | 197 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.83e-07' χ2 p-value for Mo17 x B73: '.0001376' Biased in favor of strain: 'B73' |
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| GRMZM2G400938 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G400929 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-13 | 75 | 0 | 55 | 0 | 100.00% | 0.00% | 75 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.71e-18' χ2 p-value for Mo17 x B73: '1.21e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G400929 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7 x 10-5 | 37 | 0 | 23 | 0 | 100.00% | 0.00% | 37 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000017' χ2 p-value for Mo17 x B73: '1.18e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G400907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8125 x 10-3 | 482 | 377 | 383 | 307 | 56.11% | 44.49% | 859 | 690 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003403' χ2 p-value for Mo17 x B73: '.0038125' Biased in favor of strain: 'B73' |
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| GRMZM2G400907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39 x 10-5 | 377 | 120 | 275 | 118 | 75.86% | 30.03% | 497 | 393 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000139' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G400806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-11 | 0 | 45 | 0 | 50 | 0.00% | 100.00% | 45 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.97e-11' χ2 p-value for Mo17 x B73: '1.54e-12' Biased in favor of strain: 'Mo17' |
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| GRMZM2G400806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 12 | 0.00% | 100.00% | 6 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G400718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.34132 x 10-2 | 892 | 561 | 671 | 607 | 61.39% | 47.50% | 1453 | 1278 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.84e-18' χ2 p-value for Mo17 x B73: '.0734132' Biased in favor of strain: '' |
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| GRMZM2G400718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.182773 x 10-1 | 634 | 251 | 368 | 665 | 71.64% | 64.38% | 885 | 1033 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017046' χ2 p-value for Mo17 x B73: '.1182773' Biased in favor of strain: '' |
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| GRMZM2G400714 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8 x 10-9 | 194 | 94 | 233 | 86 | 67.36% | 26.96% | 288 | 319 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.80e-09' χ2 p-value for Mo17 x B73: '1.87e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G400714 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.35421 x 10-2 | 104 | 27 | 37 | 45 | 79.39% | 54.88% | 131 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020085' χ2 p-value for Mo17 x B73: '.0235421' Biased in favor of strain: '' |
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| GRMZM2G400604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.392417 x 10-1 | 166 | 155 | 108 | 151 | 51.71% | 58.30% | 321 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5392417' χ2 p-value for Mo17 x B73: '.0075425' Biased in favor of strain: '' |
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| GRMZM2G400604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.55 x 10-23 | 450 | 64 | 182 | 121 | 87.55% | 39.93% | 514 | 303 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.88e-24' χ2 p-value for Mo17 x B73: '5.55e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G400602 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.23 x 10-5 | 30 | 2 | 28 | 5 | 93.75% | 15.15% | 32 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.43e-07' χ2 p-value for Mo17 x B73: '.0000623' Biased in favor of strain: 'B73' |
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| GRMZM2G400602 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G400570 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 40 | 6 | 9 | 8 | 86.96% | 47.06% | 46 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.36e-07' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
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| GRMZM2G400570 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.89 x 10-14 | 127 | 2 | 61 | 14 | 98.45% | 18.67% | 129 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.89e-14' χ2 p-value for Mo17 x B73: '1.16e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G400489 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.581 x 10-4 | 94 | 205 | 132 | 192 | 31.44% | 59.26% | 299 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-10' χ2 p-value for Mo17 x B73: '.0008581' Biased in favor of strain: 'Mo17' |
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| GRMZM2G400489 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.596982 x 10-1 | 11 | 5 | 3 | 13 | 68.75% | 81.25% | 16 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.215925' Biased in favor of strain: '' |
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| GRMZM2G400470 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.86592 x 10-2 | 79 | 59 | 93 | 66 | 57.25% | 41.51% | 138 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0886592' χ2 p-value for Mo17 x B73: '.0322547' Biased in favor of strain: '' |
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| GRMZM2G400470 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.210338 x 10-1 | 246 | 140 | 193 | 252 | 63.73% | 56.63% | 386 | 445 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2210338' χ2 p-value for Mo17 x B73: '7.07e-06' Biased in favor of strain: '' |
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| GRMZM2G400268 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.328234 x 10-1 | 542 | 307 | 399 | 366 | 63.84% | 47.84% | 849 | 765 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.31e-16' χ2 p-value for Mo17 x B73: '.2328234' Biased in favor of strain: '' |
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| GRMZM2G400268 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.59 x 10-12 | 764 | 229 | 412 | 435 | 76.94% | 51.36% | 993 | 847 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.59e-12' χ2 p-value for Mo17 x B73: '3.35e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G400238 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 6 | 10 | 9 | 6 | 37.50% | 40.00% | 16 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: '' |
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| GRMZM2G400238 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 4 | 1 | 25.00% | 20.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G400173 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.89 x 10-7 | 165 | 72 | 172 | 91 | 69.62% | 34.60% | 237 | 263 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-09' χ2 p-value for Mo17 x B73: '5.89e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G400173 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.34 x 10-5 | 119 | 26 | 49 | 42 | 82.07% | 46.15% | 145 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000834' χ2 p-value for Mo17 x B73: '.0000331' Biased in favor of strain: 'B73' |
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| GRMZM2G400169 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.199444 x 10-1 | 49 | 50 | 50 | 43 | 49.49% | 46.24% | 99 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9199444' χ2 p-value for Mo17 x B73: '.4679208' Biased in favor of strain: '' |
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| GRMZM2G400169 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.01242 x 10-2 | 55 | 17 | 21 | 20 | 76.39% | 48.78% | 72 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0801242' χ2 p-value for Mo17 x B73: '.0151199' Biased in favor of strain: '' |
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| GRMZM2G400156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8 x 10-20 | 306 | 102 | 214 | 61 | 75.00% | 22.18% | 408 | 275 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.55e-24' χ2 p-value for Mo17 x B73: '2.80e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G400156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 1 | 14 | 0.00% | 93.33% | 4 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: '' |
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| GRMZM2G400135 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.987646 x 10-1 | 97 | 58 | 96 | 79 | 62.58% | 45.14% | 155 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017329' χ2 p-value for Mo17 x B73: '.1987646' Biased in favor of strain: '' |
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| GRMZM2G400135 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.581841 x 10-1 | 146 | 86 | 74 | 136 | 62.93% | 64.76% | 232 | 210 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2273952' χ2 p-value for Mo17 x B73: '.5581841' Biased in favor of strain: '' |
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| GRMZM2G400109 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.198443 x 10-1 | 54 | 39 | 78 | 57 | 58.06% | 42.22% | 93 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1198443' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM2G400109 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G399952 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.624429 x 10-1 | 226 | 225 | 229 | 253 | 50.11% | 52.49% | 451 | 482 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9624429' χ2 p-value for Mo17 x B73: '.2743191' Biased in favor of strain: '' |
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| GRMZM2G399952 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.21818 x 10-2 | 213 | 132 | 115 | 158 | 61.74% | 57.88% | 345 | 273 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0521818' χ2 p-value for Mo17 x B73: '.0020609' Biased in favor of strain: '' |
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| GRMZM2G399948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G399948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |