| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Carubv10008530m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1.0 | 11 | 2 | 4 | 8 | 84.62% | 66.67% | 13 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008530m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | no data | 0.09 | 39 | 3 | 6 | 29 | 92.86% | 82.86% | 42 | 35 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008517m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.186415 x 10-1 | 36 | 3 | 5 | 24 | 92.31% | 82.76% | 39 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10008517m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.25 | 31 | 5 | 7 | 26 | 86.11% | 78.79% | 36 | 33 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10008359m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 3.28 x 10-9 | 129 | 15 | 37 | 212 | 89.58% | 85.14% | 144 | 249 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10008359m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.6 x 10-5 | 49 | 3 | 4 | 61 | 94.23% | 93.85% | 52 | 65 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10008238m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.16 | 154 | 3 | 122 | 294 | 98.09% | 70.67% | 157 | 416 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008238m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 9.84759 x 10-2 | 230 | 112 | 103 | 258 | 67.25% | 71.47% | 342 | 361 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008221m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 5.06 x 10-14 | 446 | 0 | 0 | 121 | 100.00% | 100.00% | 446 | 121 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008221m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 1293 | 276 | 531 | 813 | 82.41% | 60.49% | 1569 | 1344 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008195m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.134737 x 10-1 | 11 | 44 | 8 | 14 | 20.00% | 63.64% | 55 | 22 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008195m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 13 | 22 | 31 | 5 | 37.14% | 13.89% | 35 | 36 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008141m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 401 | 97 | 177 | 663 | 80.52% | 78.93% | 498 | 840 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008141m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 7.13 x 10-18 | 236 | 18 | 20 | 243 | 92.91% | 92.40% | 254 | 263 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008006m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 8.58373 x 10-2 | 3 | 0 | 0 | 8 | 100.00% | 100.00% | 3 | 8 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008006m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 308 | 0 | 6 | 301 | 100.00% | 98.05% | 308 | 307 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10007777m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 1.74 x 10-7 | 27 | 126 | 32 | 12 | 17.65% | 27.27% | 153 | 44 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10007777m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 72 | 213 | 403 | 194 | 25.26% | 32.50% | 285 | 597 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10007633m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | no data | 0.0 | 23 | 4 | 0 | 25 | 85.19% | 100.00% | 27 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10007633m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1.15913 x 10-2 | 11 | 4 | 0 | 16 | 73.33% | 100.00% | 15 | 16 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10007586m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 405 | 3389 | 3723 | 764 | 10.67% | 17.03% | 3794 | 4487 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10007586m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 43 | 1049 | 1913 | 364 | 3.94% | 15.99% | 1092 | 2277 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10007573m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 545 | 4 | 2 | 311 | 99.27% | 99.36% | 549 | 313 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10007573m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1280 | 5 | 6 | 826 | 99.61% | 99.28% | 1285 | 832 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10007535m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.01 | 53 | 11 | 12 | 60 | 82.81% | 83.33% | 64 | 72 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007535m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.842 x 10-4 | 50 | 13 | 4 | 45 | 79.37% | 91.84% | 63 | 49 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007482m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 646 | 28 | 71 | 2626 | 95.85% | 97.37% | 674 | 2697 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10007482m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 973 | 32 | 35 | 1191 | 96.82% | 97.15% | 1005 | 1226 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10007459m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 5.587301 x 10-1 | 14 | 12 | 4 | 12 | 53.85% | 75.00% | 26 | 16 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007459m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 147 | 70 | 15 | 150 | 67.74% | 90.91% | 217 | 165 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007447m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 1.22 x 10-11 | 5 | 34 | 32 | 4 | 12.82% | 11.11% | 39 | 36 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10007447m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | pat bias | PEG | 3.6 x 10-21 | 28 | 100 | 154 | 93 | 21.88% | 37.65% | 128 | 247 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10007424m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.55 x 10-7 | 21 | 0 | 0 | 61 | 100.00% | 100.00% | 21 | 61 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10007424m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | MEG | 8.01 x 10-6 | 14 | 0 | 0 | 46 | 100.00% | 100.00% | 14 | 46 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10007418m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 6.06 x 10-27 | 284 | 0 | 0 | 242 | 100.00% | 100.00% | 284 | 242 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10007418m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.21 x 10-7 | 99 | 0 | 0 | 62 | 100.00% | 100.00% | 99 | 62 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10007349m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 1.4 x 10-14 | 357 | 12 | 64 | 359 | 96.75% | 84.87% | 369 | 423 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10007349m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 9.225 x 10-4 | 112 | 2 | 3 | 40 | 98.25% | 93.02% | 114 | 43 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10007226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 3.78 x 10-12 | 108 | 4 | 12 | 156 | 96.43% | 92.86% | 112 | 168 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 394 | 63 | 236 | 797 | 86.21% | 77.15% | 457 | 1033 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007195m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.6 | 34 | 7 | 76 | 138 | 82.93% | 64.49% | 41 | 214 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007195m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.065387 x 10-1 | 105 | 4 | 5 | 21 | 96.33% | 80.77% | 109 | 26 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007145m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.110792 x 10-1 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||
| Carubv10007145m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 135 | 1 | 0 | 303 | 99.26% | 100.00% | 136 | 303 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10007126m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.466035 x 10-1 | 45 | 20 | 27 | 49 | 69.23% | 64.47% | 65 | 76 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007126m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.12 | 9 | 19 | 25 | 30 | 32.14% | 54.55% | 28 | 55 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10007084m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 8.03 x 10-5 | 3 | 26 | 11 | 1 | 10.34% | 8.33% | 29 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10007084m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 0 | 26 | 119 | 21 | 0.00% | 15.00% | 26 | 140 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10006880m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 3.44 x 10-12 | 94 | 0 | 4 | 124 | 100.00% | 96.88% | 94 | 128 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006880m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 6.48 x 10-6 | 40 | 4 | 0 | 46 | 90.91% | 100.00% | 44 | 46 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006801m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 524 | 1 | 0 | 931 | 99.81% | 100.00% | 525 | 931 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006801m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 413 | 2 | 0 | 1192 | 99.52% | 100.00% | 415 | 1192 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006597m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 2.48 x 10-14 | 5 | 29 | 35 | 2 | 14.71% | 5.41% | 34 | 37 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10006597m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 5 | 87 | 329 | 17 | 5.43% | 4.91% | 92 | 346 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10006582m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 3.92 x 10-11 | 111 | 13 | 17 | 165 | 89.52% | 90.66% | 124 | 182 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10006582m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 2.77 x 10-12 | 32 | 4 | 0 | 106 | 88.89% | 100.00% | 36 | 106 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10006534m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 449 | 2 | 0 | 1645 | 99.56% | 100.00% | 451 | 1645 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006534m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 678 | 2 | 1 | 2192 | 99.71% | 99.95% | 680 | 2193 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10006496m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.72 x 10-25 | 582 | 57 | 36 | 379 | 91.08% | 91.33% | 639 | 415 | C. rubella v.1.0 |
Sanger Validation?: 'Imprinted in one direction of cross' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10006496m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 2.6 x 10-24 | 322 | 59 | 88 | 548 | 84.51% | 86.16% | 381 | 636 | C. rubella v.1.0 |
Sanger Validation?: 'Imprinted in one direction of cross' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10006455m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 0.0 | 2153 | 224 | 120 | 3249 | 90.58% | 96.44% | 2377 | 3369 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10006455m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 2161 | 915 | 1785 | 5578 | 70.25% | 75.76% | 3076 | 7363 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10006424m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 72 | 3433 | 2289 | 474 | 2.05% | 17.16% | 3505 | 2763 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10006424m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 21 | 1614 | 962 | 31 | 1.28% | 3.12% | 1635 | 993 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10006293m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 4 | 64 | 162 | 9 | 5.88% | 5.26% | 68 | 171 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10006293m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 2.48 x 10-14 | 5 | 26 | 35 | 2 | 16.13% | 5.41% | 31 | 37 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10006247m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 93 | 58 | 215 | 4 | 61.59% | 1.83% | 151 | 219 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10006247m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 0.0 | 342 | 217 | 1775 | 180 | 61.18% | 9.21% | 559 | 1955 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10006226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | no data | 1.8572 x 10-3 | 40 | 0 | 1 | 28 | 100.00% | 96.55% | 40 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10006226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.43 | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10006053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.08 | 56 | 7 | 6 | 30 | 88.89% | 83.33% | 63 | 36 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10006053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.000091 x 10-1 | 128 | 46 | 75 | 157 | 73.56% | 67.67% | 174 | 232 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005908m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 8.965 x 10-4 | 28 | 1 | 0 | 27 | 96.55% | 100.00% | 29 | 27 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10005908m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 7.0453 x 10-3 | 12 | 0 | 0 | 18 | 100.00% | 100.00% | 12 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10005849m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 2.29 x 10-17 | 6 | 42 | 38 | 0 | 12.50% | 0.00% | 48 | 38 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005849m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 4.9 x 10-6 | 8 | 15 | 12 | 0 | 34.78% | 0.00% | 23 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005783m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 120 | 690 | 1112 | 340 | 14.81% | 23.42% | 810 | 1452 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005783m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 2.34 x 10-24 | 100 | 250 | 198 | 129 | 28.57% | 39.45% | 350 | 327 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005732m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 224 | 155 | 112 | 484 | 59.10% | 81.21% | 379 | 596 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005732m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.94 x 10-20 | 241 | 102 | 22 | 274 | 70.26% | 92.57% | 343 | 296 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005690m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 27 | 0 | 3 | 52 | 100.00% | 94.55% | 27 | 55 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005690m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.14847 x 10-2 | 8 | 0 | 0 | 12 | 100.00% | 100.00% | 8 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005626m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.110792 x 10-1 | 6 | 0 | 0 | 3 | 100.00% | 100.00% | 6 | 3 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005626m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 214 | 7 | 11 | 1094 | 96.83% | 99.00% | 221 | 1105 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005583m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.2185 x 10-3 | 16 | 6 | 0 | 25 | 72.73% | 100.00% | 22 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005583m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.16 | 2 | 6 | 4 | 20 | 25.00% | 83.33% | 8 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005501m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 20 | 151 | 144 | 30 | 11.70% | 17.24% | 171 | 174 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005501m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 7.45 x 10-16 | 37 | 74 | 118 | 73 | 33.33% | 38.22% | 111 | 191 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10005443m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.34 x 10-6 | 25 | 14 | 30 | 15 | 64.10% | 33.33% | 39 | 45 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005443m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.12 | 21 | 9 | 8 | 6 | 70.00% | 42.86% | 30 | 14 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005437m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | no data | 0.43 | 5 | 25 | 22 | 33 | 16.67% | 60.00% | 30 | 55 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005437m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 2.181388 x 10-1 | 15 | 2 | 6 | 5 | 88.24% | 45.45% | 17 | 11 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005408m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.3195 x 10-3 | 43 | 17 | 8 | 50 | 71.67% | 86.21% | 60 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005408m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.03 | 35 | 8 | 2 | 22 | 81.40% | 91.67% | 43 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005282m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 495 | 0 | 2 | 640 | 100.00% | 99.69% | 495 | 642 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10005282m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 2.48186 x 10-2 | 12 | 0 | 0 | 13 | 100.00% | 100.00% | 12 | 13 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10005151m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.801329 x 10-1 | 32 | 7 | 13 | 16 | 82.05% | 55.17% | 39 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005151m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.06 | 26 | 1 | 3 | 22 | 96.30% | 88.00% | 27 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10005079m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 5.587301 x 10-1 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10005079m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 684 | 1 | 2 | 988 | 99.85% | 99.80% | 685 | 990 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |