GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM5G878153	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	744	231	755	260	76.31%	25.62%	975	1015	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878153	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	772	127	504	346	85.87%	40.71%	899	850	RefGen V2	χ2 p-value for B73 x Mo17: '2.55e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878139	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	800	281	635	215	74.01%	25.29%	1081	850	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878139	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2308	396	1340	449	85.36%	25.10%	2704	1789	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878070	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.69718 x 10^-2	113	54	88	61	67.66%	40.94%	167	149	RefGen V2	χ2 p-value for B73 x Mo17: '4.98e-06' χ2 p-value for Mo17 x B73: '.0269718' Biased in favor of strain: 'B73'
GRMZM5G878070	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.034784 x 10^-1	104	26	46	90	80.00%	66.18%	130	136	RefGen V2	χ2 p-value for B73 x Mo17: '.0012603' χ2 p-value for Mo17 x B73: '.9034784' Biased in favor of strain: ''
GRMZM5G878058	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0 x 10^-30	443	93	369	118	82.65%	24.23%	536	487	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.64e-30' Biased in favor of strain: 'B73'
GRMZM5G878058	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-18	335	46	230	65	87.93%	22.03%	381	295	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878044	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.362861 x 10^-1	326	268	232	201	54.88%	46.42%	594	433	RefGen V2	χ2 p-value for B73 x Mo17: '.0173235' χ2 p-value for Mo17 x B73: '.1362861' Biased in favor of strain: ''
GRMZM5G878044	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.576646 x 10^-1	434	192	356	499	69.33%	58.36%	626	855	RefGen V2	χ2 p-value for B73 x Mo17: '.1576646' χ2 p-value for Mo17 x B73: '2.59e-07' Biased in favor of strain: ''
GRMZM5G878008	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.18 x 10^-23	858	494	778	431	63.46%	35.65%	1352	1209	RefGen V2	χ2 p-value for B73 x Mo17: '4.18e-23' χ2 p-value for Mo17 x B73: '1.87e-23' Biased in favor of strain: 'B73'
GRMZM5G878008	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.87135 x 10^-2	2017	775	960	1747	72.24%	64.54%	2792	2707	RefGen V2	χ2 p-value for B73 x Mo17: '4.12e-10' χ2 p-value for Mo17 x B73: '.0187135' Biased in favor of strain: ''
GRMZM5G877956	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.81 x 10^-6	54	13	58	19	80.60%	24.68%	67	77	RefGen V2	χ2 p-value for B73 x Mo17: '5.47e-07' χ2 p-value for Mo17 x B73: '8.81e-06' Biased in favor of strain: 'B73'
GRMZM5G877956	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.172455 x 10^-1	39	17	19	42	69.64%	68.85%	56	61	RefGen V2	χ2 p-value for B73 x Mo17: '.6366258' χ2 p-value for Mo17 x B73: '.7172455' Biased in favor of strain: ''
GRMZM5G877941	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.174129 x 10^-1	103	90	122	135	53.37%	52.53%	193	257	RefGen V2	χ2 p-value for B73 x Mo17: '.3493965' χ2 p-value for Mo17 x B73: '.4174129' Biased in favor of strain: ''
GRMZM5G877941	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.844693 x 10^-1	93	52	33	74	64.14%	69.16%	145	107	RefGen V2	χ2 p-value for B73 x Mo17: '.5182784' χ2 p-value for Mo17 x B73: '.5844693' Biased in favor of strain: ''
GRMZM5G877884	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.473896 x 10^-1	13	14	9	7	48.15%	43.75%	27	16	RefGen V2	χ2 p-value for B73 x Mo17: '.8473896' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM5G877884	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	3	100.00%	42.86%	3	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM5G877838	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.738447 x 10^-1	245	250	180	177	49.49%	49.58%	495	357	RefGen V2	χ2 p-value for B73 x Mo17: '.8221868' χ2 p-value for Mo17 x B73: '.8738447' Biased in favor of strain: ''
GRMZM5G877838	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.487385 x 10^-1	36	19	27	46	65.45%	63.01%	55	73	RefGen V2	χ2 p-value for B73 x Mo17: '.8487385' χ2 p-value for Mo17 x B73: '.5079166' Biased in favor of strain: ''
GRMZM5G877815	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.8599 x 10^-3	20	2	16	3	90.91%	15.79%	22	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0001242' χ2 p-value for Mo17 x B73: '.0028599' Biased in favor of strain: 'B73'
GRMZM5G877815	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.134 x 10^-4	109	25	69	42	81.34%	37.84%	134	111	RefGen V2	χ2 p-value for B73 x Mo17: '.0003134' χ2 p-value for Mo17 x B73: '1.17e-10' Biased in favor of strain: 'B73'
GRMZM5G877788	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.2202 x 10^-3	138	98	219	89	58.47%	28.90%	236	308	RefGen V2	χ2 p-value for B73 x Mo17: '.0092202' χ2 p-value for Mo17 x B73: '1.29e-13' Biased in favor of strain: 'B73'
GRMZM5G877788	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402792 x 10^-1	7	5	6	7	58.33%	53.85%	12	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM5G877647	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-6	105	15	68	22	87.50%	24.44%	120	90	RefGen V2	χ2 p-value for B73 x Mo17: '2.11e-16' χ2 p-value for Mo17 x B73: '1.24e-06' Biased in favor of strain: 'B73'
GRMZM5G877647	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1898 x 10^-3	22	1	14	4	95.65%	22.22%	23	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0031898' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73'
GRMZM5G877500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.450087 x 10^-1	175	161	141	111	52.08%	44.05%	336	252	RefGen V2	χ2 p-value for B73 x Mo17: '.4450087' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM5G877500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.149149 x 10^-1	14	14	7	27	50.00%	79.41%	28	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0613645' χ2 p-value for Mo17 x B73: '.1149149' Biased in favor of strain: ''
GRMZM5G877336	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.589549 x 10^-1	227	188	144	141	54.70%	49.47%	415	285	RefGen V2	χ2 p-value for B73 x Mo17: '.0555646' χ2 p-value for Mo17 x B73: '.8589549' Biased in favor of strain: ''
GRMZM5G877336	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	3	6	16	66.67%	72.73%	9	22	RefGen V2	χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.5464937' Biased in favor of strain: ''
GRMZM5G876898	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1539	819	1717	821	65.27%	32.35%	2358	2538	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G876898	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.11 x 10^-16	1250	391	652	756	76.17%	53.69%	1641	1408	RefGen V2	χ2 p-value for B73 x Mo17: '3.11e-16' χ2 p-value for Mo17 x B73: '5.33e-25' Biased in favor of strain: 'B73'
GRMZM5G876811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.83 x 10^-7	116	49	112	46	70.30%	29.11%	165	158	RefGen V2	χ2 p-value for B73 x Mo17: '1.83e-07' χ2 p-value for Mo17 x B73: '1.52e-07' Biased in favor of strain: 'B73'
GRMZM5G876811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710998 x 10^-1	8	2	10	6	80.00%	37.50%	10	16	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: ''
GRMZM5G876773	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3408 x 10^-3	265	337	237	355	44.02%	59.97%	602	592	RefGen V2	χ2 p-value for B73 x Mo17: '.0033408' χ2 p-value for Mo17 x B73: '1.24e-06' Biased in favor of strain: 'Mo17'
GRMZM5G876773	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.310284 x 10^-1	539	257	189	466	67.71%	71.15%	796	655	RefGen V2	χ2 p-value for B73 x Mo17: '.5310284' χ2 p-value for Mo17 x B73: '.0150428' Biased in favor of strain: ''
GRMZM5G876621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05 x 10^-9	491	305	505	337	61.68%	40.02%	796	842	RefGen V2	χ2 p-value for B73 x Mo17: '4.32e-11' χ2 p-value for Mo17 x B73: '7.05e-09' Biased in favor of strain: 'B73'
GRMZM5G876621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.035025 x 10^-1	393	190	200	378	67.41%	65.40%	583	578	RefGen V2	χ2 p-value for B73 x Mo17: '.7035025' χ2 p-value for Mo17 x B73: '.5175931' Biased in favor of strain: ''
GRMZM5G876616	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.006 x 10^-4	5	27	3	41	15.62%	93.18%	32	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0001006' χ2 p-value for Mo17 x B73: '1.01e-08' Biased in favor of strain: 'Mo17'
GRMZM5G876616	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.73 x 10^-17	6	116	4	164	4.92%	97.62%	122	168	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.73e-17' Biased in favor of strain: 'Mo17'
GRMZM5G876518	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.110798 x 10^-1	21	16	43	15	56.76%	25.86%	37	58	RefGen V2	χ2 p-value for B73 x Mo17: '.4110798' χ2 p-value for Mo17 x B73: '.0002364' Biased in favor of strain: ''
GRMZM5G876518	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.39 x 10^-12	117	5	36	7	95.90%	16.28%	122	43	RefGen V2	χ2 p-value for B73 x Mo17: '7.39e-12' χ2 p-value for Mo17 x B73: '2.40e-12' Biased in favor of strain: 'B73'
GRMZM5G876450	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.74 x 10^-5	0	27	0	17	0.00%	100.00%	27	17	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17'
GRMZM5G876450	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	10	0.00%	100.00%	6	10	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM5G876434	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	6	4	1	40.00%	20.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM5G876434	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	2	100.00%	100.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G876379	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.164123 x 10^-1	40	16	21	17	71.43%	44.74%	56	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.5164123' Biased in favor of strain: ''
GRMZM5G876379	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.514373 x 10^-1	27	19	12	54	58.70%	81.82%	46	66	RefGen V2	χ2 p-value for B73 x Mo17: '.2514373' χ2 p-value for Mo17 x B73: '.0090234' Biased in favor of strain: ''
GRMZM5G876303	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9114 x 10^-3	606	517	415	513	53.96%	55.28%	1123	928	RefGen V2	χ2 p-value for B73 x Mo17: '.0079114' χ2 p-value for Mo17 x B73: '.0012954' Biased in favor of strain: ''
GRMZM5G876303	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.398 x 10^-3	694	280	437	727	71.25%	62.46%	974	1164	RefGen V2	χ2 p-value for B73 x Mo17: '.002398' χ2 p-value for Mo17 x B73: '.0023139' Biased in favor of strain: 'B73'
GRMZM5G876160	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5454 x 10^-3	99	62	99	51	61.49%	34.00%	161	150	RefGen V2	χ2 p-value for B73 x Mo17: '.0035454' χ2 p-value for Mo17 x B73: '.0000888' Biased in favor of strain: 'B73'
GRMZM5G876160	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	5.711 x 10^-4	20	65	81	97	23.53%	54.49%	85	178	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-17' χ2 p-value for Mo17 x B73: '.0005711' Biased in favor of strain: ''
GRMZM5G876146	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5836 x 10^-3	208	145	174	126	58.92%	42.00%	353	300	RefGen V2	χ2 p-value for B73 x Mo17: '.000799' χ2 p-value for Mo17 x B73: '.0055836' Biased in favor of strain: 'B73'
GRMZM5G876146	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15413 x 10^-2	55	14	27	24	79.71%	47.06%	69	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0215413' χ2 p-value for Mo17 x B73: '.0029737' Biased in favor of strain: ''
GRMZM5G876112	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	233	3	215	7	98.73%	3.15%	236	222	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G876112	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.05 x 10^-6	61	1	28	13	98.39%	31.71%	62	41	RefGen V2	χ2 p-value for B73 x Mo17: '1.17e-07' χ2 p-value for Mo17 x B73: '2.05e-06' Biased in favor of strain: 'B73'
GRMZM5G875999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4568 x 10^-3	50	20	56	27	71.43%	32.53%	70	83	RefGen V2	χ2 p-value for B73 x Mo17: '.0003362' χ2 p-value for Mo17 x B73: '.0014568' Biased in favor of strain: 'B73'
GRMZM5G875999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G875864	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	280	21	387	39	93.02%	9.15%	301	426	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G875864	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.526 x 10^-4	31	51	11	68	37.80%	86.08%	82	79	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-08' χ2 p-value for Mo17 x B73: '.0002526' Biased in favor of strain: 'Mo17'
GRMZM5G875735	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	8	8	7	8	50.00%	53.33%	16	15	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: ''
GRMZM5G875735	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06383 x 10^-2	19	2	18	12	90.48%	40.00%	21	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0206383' χ2 p-value for Mo17 x B73: '.0019458' Biased in favor of strain: ''
GRMZM5G875732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	463	47	550	58	90.78%	9.54%	510	608	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G875732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G875676	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.38 x 10^-5	118	60	119	55	66.29%	31.61%	178	174	RefGen V2	χ2 p-value for B73 x Mo17: '.0000138' χ2 p-value for Mo17 x B73: '1.22e-06' Biased in favor of strain: 'B73'
GRMZM5G875676	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.202336 x 10^-1	102	53	77	71	65.81%	47.97%	155	148	RefGen V2	χ2 p-value for B73 x Mo17: '.8202336' χ2 p-value for Mo17 x B73: '1.41e-06' Biased in favor of strain: ''
GRMZM5G875655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37 x 10^-7	251	146	234	111	63.22%	32.17%	397	345	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-07' χ2 p-value for Mo17 x B73: '3.54e-11' Biased in favor of strain: 'B73'
GRMZM5G875655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.27187 x 10^-1	250	128	419	108	66.14%	20.49%	378	527	RefGen V2	χ2 p-value for B73 x Mo17: '.827187' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM5G875564	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.9296 x 10^-3	182	134	167	113	57.59%	40.36%	316	280	RefGen V2	χ2 p-value for B73 x Mo17: '.0069296' χ2 p-value for Mo17 x B73: '.0012504' Biased in favor of strain: 'B73'
GRMZM5G875564	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.382561 x 10^-1	76	25	37	71	75.25%	65.74%	101	108	RefGen V2	χ2 p-value for B73 x Mo17: '.0673529' χ2 p-value for Mo17 x B73: '.8382561' Biased in favor of strain: ''
GRMZM5G875502	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.821223 x 10^-1	135	101	100	82	57.20%	45.05%	236	182	RefGen V2	χ2 p-value for B73 x Mo17: '.0268831' χ2 p-value for Mo17 x B73: '.1821223' Biased in favor of strain: ''
GRMZM5G875502	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.969179 x 10^-1	267	124	139	226	68.29%	61.92%	391	365	RefGen V2	χ2 p-value for B73 x Mo17: '.4969179' χ2 p-value for Mo17 x B73: '.0542785' Biased in favor of strain: ''
GRMZM5G875445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	2	1	0.00%	33.33%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM5G875445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	0	100.00%	0.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM5G875238	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	15	2	12	5	88.24%	29.41%	17	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM5G875238	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-5	44	2	39	26	95.65%	40.00%	46	65	RefGen V2	χ2 p-value for B73 x Mo17: '.0000304' χ2 p-value for Mo17 x B73: '5.10e-06' Biased in favor of strain: 'B73'
GRMZM5G875038	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	2	4	33.33%	66.67%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM5G875038	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G874955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5771 x 10^-3	61	30	50	23	67.03%	31.51%	91	73	RefGen V2	χ2 p-value for B73 x Mo17: '.0011553' χ2 p-value for Mo17 x B73: '.0015771' Biased in favor of strain: 'B73'
GRMZM5G874955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	12	13	71.43%	52.00%	7	25	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.1197949' Biased in favor of strain: ''
GRMZM5G874903	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.824224 x 10^-1	33	22	22	14	60.00%	38.89%	55	36	RefGen V2	χ2 p-value for B73 x Mo17: '.1380107' χ2 p-value for Mo17 x B73: '.1824224' Biased in favor of strain: ''
GRMZM5G874903	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.891308 x 10^-1	32	18	10	46	64.00%	82.14%	50	56	RefGen V2	χ2 p-value for B73 x Mo17: '.6891308' χ2 p-value for Mo17 x B73: '.0140193' Biased in favor of strain: ''
GRMZM5G874896	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.016996 x 10^-1	34	26	30	42	56.67%	58.33%	60	72	RefGen V2	χ2 p-value for B73 x Mo17: '.3016996' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM5G874896	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48085 x 10^-2	34	5	12	10	87.18%	45.45%	39	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0065788' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: ''
GRMZM5G874756	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.89 x 10^-13	782	436	931	643	64.20%	40.85%	1218	1574	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-23' χ2 p-value for Mo17 x B73: '3.89e-13' Biased in favor of strain: 'B73'
GRMZM5G874756	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.92297 x 10^-2	20	1	2	15	95.24%	88.24%	21	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0054788' χ2 p-value for Mo17 x B73: '.0592297' Biased in favor of strain: ''
GRMZM5G874736	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5015 x 10^-2	80	44	55	35	64.52%	38.89%	124	90	RefGen V2	χ2 p-value for B73 x Mo17: '.0012254' χ2 p-value for Mo17 x B73: '.035015' Biased in favor of strain: 'B73'
GRMZM5G874736	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.62433 x 10^-1	59	19	22	53	75.64%	70.67%	78	75	RefGen V2	χ2 p-value for B73 x Mo17: '.0927028' χ2 p-value for Mo17 x B73: '.462433' Biased in favor of strain: ''
GRMZM5G874697	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6 x 10^-23	178	34	165	27	83.96%	14.06%	212	192	RefGen V2	χ2 p-value for B73 x Mo17: '4.60e-23' χ2 p-value for Mo17 x B73: '2.30e-23' Biased in favor of strain: 'B73'
GRMZM5G874697	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402915 x 10^-1	18	0	3	9	100.00%	75.00%	18	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.5402915' Biased in favor of strain: ''
GRMZM5G874578	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1 x 10^-10	57	7	65	4	89.06%	5.80%	64	69	RefGen V2	χ2 p-value for B73 x Mo17: '4.10e-10' χ2 p-value for Mo17 x B73: '2.08e-13' Biased in favor of strain: 'B73'
GRMZM5G874578	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-8	76	2	21	3	97.44%	12.50%	78	24	RefGen V2	χ2 p-value for B73 x Mo17: '8.19e-09' χ2 p-value for Mo17 x B73: '1.81e-08' Biased in favor of strain: 'B73'
GRMZM5G874568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	300	0	253	0	100.00%	0.00%	300	253	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G874568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	358	0	113	0	100.00%	0.00%	358	113	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G874562	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9791 x 10^-2	138	61	73	49	69.35%	40.16%	199	122	RefGen V2	χ2 p-value for B73 x Mo17: '4.80e-08' χ2 p-value for Mo17 x B73: '.029791' Biased in favor of strain: 'B73'
GRMZM5G874562	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.0 x 10^-7	131	19	70	60	87.33%	46.15%	150	130	RefGen V2	χ2 p-value for B73 x Mo17: '7.90e-08' χ2 p-value for Mo17 x B73: '7.00e-07' Biased in favor of strain: 'B73'
GRMZM5G874500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.99 x 10^-10	2522	1505	1700	1352	62.63%	44.30%	4027	3052	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.99e-10' Biased in favor of strain: 'B73'
GRMZM5G874500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-23	5114	1869	2349	3605	73.23%	60.55%	6983	5954	RefGen V2	χ2 p-value for B73 x Mo17: '2.49e-31' χ2 p-value for Mo17 x B73: '1.29e-23' Biased in favor of strain: 'B73'
GRMZM5G874478	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-10	403	240	392	219	62.67%	35.84%	643	611	RefGen V2	χ2 p-value for B73 x Mo17: '1.29e-10' χ2 p-value for Mo17 x B73: '2.58e-12' Biased in favor of strain: 'B73'
GRMZM5G874478	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.065 x 10^-4	515	185	328	417	73.57%	55.97%	700	745	RefGen V2	χ2 p-value for B73 x Mo17: '.0001065' χ2 p-value for Mo17 x B73: '5.95e-10' Biased in favor of strain: 'B73'

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