| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G10030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.492 x 10-3 | 24 | 5 | 82.76% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G10030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.28476 x 10-1 | 18 | 20 | 47.37% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G10020 | HSD5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.4136 x 10-1 | 57 | 44 | 56.44% | 101 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G10020 | HSD5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1248 x 10-2 | 128 | 47 | 73.14% | 175 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G10020 | HSD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.878 x 10-3 | 49 | 11 | 81.67% | 60 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G10020 | HSD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.74364 x 10-1 | 328 | 282 | 59 | 266 | 53.77% | 81.85% | 610 | 325 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.030966' Avg. expression score for this sample: '255.38' Avg. expression score in LCM sample: '69.9033' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G10020 | HSD5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.10074 x 10-1 | 464 | 257 | 269 | 461 | 64.36% | 63.15% | 721 | 730 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.030966' Avg. expression score for this sample: '291.642' Avg. expression score in LCM sample: '69.9033' Tissue used: 'full endosperm' |
||||
| AT4G10020 | HSD5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.36818 x 10-1 | 488 | 635 | 245 | 304 | 43.46% | 55.37% | 1123 | 549 | TAIR8 |
Avg. embryo expression (dissected): '907.617' Avg. embryo expression (LCM): '74.0203' |
|||
| AT4G10010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.623566' Avg. embryo expression (LCM): '0' |
||||||
| AT4G10010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G10010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G10010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.078649' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G10010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G10010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.71434' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G10000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.49482 x 10-1 | 2 | 5 | 3 | 4 | 28.57% | 57.14% | 7 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '9.51457' Avg. expression score in LCM sample: '12.1258' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G10000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.11194 x 10-1 | 7 | 0 | 4 | 7 | 100.00% | 63.64% | 7 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.6445' Avg. expression score in LCM sample: '12.1258' Tissue used: 'full endosperm' |
|||||
| AT4G10000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G10000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 5 | 2 | 0 | 50.00% | 0.00% | 10 | 2 | TAIR8 |
Avg. embryo expression (dissected): '14.2016' Avg. embryo expression (LCM): '22.6054' |
||||
| AT4G10000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.36382 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G10000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.78431 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09990 | GXM2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09990 | GXM2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09990 | GXM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09990 | GXM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.92075 x 10-1 | 1 | 3 | 1 | 2 | 25.00% | 66.67% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.81932' Avg. expression score in LCM sample: '1.32281' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G09990 | GXM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.02941 x 10-1 | 7 | 0 | 0 | 2 | 100.00% | 100.00% | 7 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.4748' Avg. expression score in LCM sample: '1.32281' Tissue used: 'full endosperm' |
||||
| AT4G09990 | GXM2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.78769' Avg. embryo expression (LCM): '0' |
||||
| AT4G09984 | LCR34 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT4G09984 | LCR34 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT4G09984 | LCR34 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09984 | LCR34 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09984 | LCR34 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09984 | LCR34 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G09980 | EMB1691 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.633 x 10-3 | 236 | 60 | 86 | 206 | 79.73% | 70.55% | 296 | 292 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000536' Avg. expression score for this sample: '626.92' Avg. expression score in LCM sample: '225.657' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G09980 | EMB1691 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.142 x 10-3 | 327 | 76 | 81.14% | 403 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09980 | EMB1691 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.2268 x 10-2 | 212 | 109 | 78 | 252 | 66.04% | 76.36% | 321 | 330 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000536' Avg. expression score for this sample: '718.994' Avg. expression score in LCM sample: '225.657' Tissue used: 'full endosperm' |
||||
| AT4G09980 | EMB1691 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.55667 x 10-1 | 190 | 198 | 77 | 78 | 48.97% | 50.32% | 388 | 155 | TAIR8 |
Avg. embryo expression (dissected): '630.526' Avg. embryo expression (LCM): '441.233' |
|||
| AT4G09980 | EMB1691 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.94762 x 10-1 | 47 | 12 | 79.66% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09980 | EMB1691 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-7 | 419 | 77 | 84.48% | 496 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.6087 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.0657 x 10-2 | 19 | 0 | 100.00% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 5 | 75.00% | 83.33% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.523097' Avg. expression score for this sample: '14.068' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.49845 x 10-1 | 5 | 0 | 2 | 3 | 100.00% | 60.00% | 5 | 5 | TAIR8 |
Avg. embryo expression (dissected): '39.5239' Avg. embryo expression (LCM): '33.5565' |
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| AT4G09970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 1 | 2 | 5 | 80.00% | 71.43% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.523097' Avg. expression score for this sample: '8.85777' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G09965 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 1 | 0 | 0 | 83.33% | 6 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.747527' Avg. expression score for this sample: '1.6251' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G09965 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G09965 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09965 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09965 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.49482 x 10-1 | 6 | 0 | 8 | 0 | 100.00% | 0.00% | 6 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.747527' Avg. expression score for this sample: '5.81292' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09965 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09960 | STK | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 649 | 1 | 99.85% | 650 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09960 | STK | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.9062 x 10-2 | 11 | 0 | 0 | 7 | 100.00% | 100.00% | 11 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-14' Avg. expression score for this sample: '20.4531' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09960 | STK | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.91195' Avg. embryo expression (LCM): '3.78013' |
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| AT4G09960 | STK | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.6 x 10-13 | 34 | 0 | 0 | 71 | 100.00% | 100.00% | 34 | 71 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-14' Avg. expression score for this sample: '266.457' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT4G09960 | STK | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 123 | 0 | 100.00% | 123 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09960 | STK | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.29475' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G09950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.68207 x 10-1 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.885527' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G09950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '6.24161' |
||||||
| AT4G09940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.37524 x 10-1 | 5 | 17 | 0 | 2 | 22.73% | 100.00% | 22 | 2 | TAIR8 |
Avg. embryo expression (dissected): '7.90471' Avg. embryo expression (LCM): '19.1518' |
||||
| AT4G09940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.634 x 10-2 | 1 | 3 | 1 | 34 | 25.00% | 97.14% | 4 | 35 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.482146' Avg. expression score for this sample: '7.31691' Avg. expression score in LCM sample: '3.73327' Tissue used: 'full endosperm' |
|||||
| AT4G09940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.098 x 10-3 | 16 | 27 | 37.21% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.8125 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.28 x 10-4 | 4 | 18 | 18.18% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.7845 x 10-2 | 37 | 51 | 5 | 27 | 42.05% | 84.38% | 88 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.482146' Avg. expression score for this sample: '32.0714' Avg. expression score in LCM sample: '3.73327' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.252183' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G09930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 3 | 0 | 1 | 1 | 100.00% | 50.00% | 3 | 2 | TAIR8 |
Avg. embryo expression (dissected): '2.5655' Avg. embryo expression (LCM): '1.21818' |
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| AT4G09930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.53638' Avg. expression score in LCM sample: '3.10126' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.89921' Avg. embryo expression (LCM): '6.61837' |
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| AT4G09920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '15.0227' Avg. expression score in LCM sample: '3.10126' Tissue used: 'full endosperm' |
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| AT4G09900 | MES12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.7175 x 10-2 | 25 | 4 | 0 | 5 | 86.21% | 100.00% | 29 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00716' Avg. expression score for this sample: '7.16513' Avg. expression score in LCM sample: '3.24824' Tissue used: 'full endosperm' |
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| AT4G09900 | MES12 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.61215 x 10-1 | 8 | 12 | 3 | 1 | 40.00% | 25.00% | 20 | 4 | TAIR8 |
Avg. embryo expression (dissected): '20.2605' Avg. embryo expression (LCM): '8.32634' |
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| AT4G09900 | MES12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09900 | MES12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.53443 x 10-1 | 41 | 6 | 87.23% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09900 | MES12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.5449 x 10-2 | 12 | 1 | 0 | 4 | 92.31% | 100.00% | 13 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00716' Avg. expression score for this sample: '5.48776' Avg. expression score in LCM sample: '3.24824' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09900 | MES12 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5554 x 10-2 | 174 | 5 | 97.21% | 179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G09890 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.45637' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G09890 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.9487' Avg. embryo expression (LCM): '2.36101' |
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| AT4G09890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.51415' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G09890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G09890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.05088' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G09880 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G09880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.96604' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G09880 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.18984' Avg. embryo expression (LCM): '0' |
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| AT4G09870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT4G09870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.165147' Avg. expression score in LCM sample: '1.45509' Tissue used: 'full endosperm' |