Displaying data sets 59701 - 59800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G10170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '277.911'
Avg. embryo expression (LCM): '142.665'
AT4G10170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '242.246'
Avg. expression score in LCM sample: '32.9086'
Tissue used: 'pure endosperm, no chalazal'
AT4G10170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '184.949'
Avg. expression score in LCM sample: '32.9086'
Tissue used: 'full endosperm'
AT4G10160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.96645'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.92293'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.46566'
Avg. embryo expression (LCM): '0'
AT4G10150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '128.144'
Avg. embryo expression (LCM): '108.757'
AT4G10150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '124.53'
Avg. expression score in LCM sample: '15.9178'
Tissue used: 'pure endosperm, no chalazal'
AT4G10150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 3 50.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '378.189'
Avg. expression score in LCM sample: '15.9178'
Tissue used: 'full endosperm'
AT4G10150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6085 x 10-2 60 2 96.77% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-5 153 3 98.08% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 5 2 1 3 71.43% 75.00% 7 4 TAIR8 Avg. embryo expression (dissected): '33.4265'
Avg. embryo expression (LCM): '20.1816'
AT4G10140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.49447 x 10-1 10 2 4 7 83.33% 63.64% 12 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00596'
Avg. expression score for this sample: '35.8937'
Avg. expression score in LCM sample: '11.8171'
Tissue used: 'pure endosperm, no chalazal'
AT4G10140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.756 x 10-3 24 3 5 36 88.89% 87.80% 27 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00596'
Avg. expression score for this sample: '63.1395'
Avg. expression score in LCM sample: '11.8171'
Tissue used: 'full endosperm'
AT4G10130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.66 x 10-4 328 49 156 273 87.00% 63.64% 377 429 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003722'
Avg. expression score for this sample: '264.572'
Avg. expression score in LCM sample: '103.429'
Tissue used: 'full endosperm'
AT4G10130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.60122 x 10-1 44 23 65.67% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9884 x 10-2 277 138 66.75% 415 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.23122 x 10-1 120 21 61 38 85.11% 38.38% 141 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003722'
Avg. expression score for this sample: '117.899'
Avg. expression score in LCM sample: '103.429'
Tissue used: 'pure endosperm, no chalazal'
AT4G10130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-18 426 41 91.22% 467 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.65 x 10-4 148 60 21 16 71.15% 43.24% 208 37 TAIR8 Avg. embryo expression (dissected): '168.923'
Avg. embryo expression (LCM): '236.491'
AT4G10120 ATSPS4F embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.2378 x 10-2 6 27 4 5 18.18% 55.56% 33 9 TAIR8 Avg. embryo expression (dissected): '11.3589'
Avg. embryo expression (LCM): '6.93233'
AT4G10120 ATSPS4F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.82 x 10-3 37 5 9 42 88.10% 82.35% 42 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-22'
Avg. expression score for this sample: '14.2009'
Avg. expression score in LCM sample: '5.98205'
Tissue used: 'pure endosperm, no chalazal'
AT4G10120 ATSPS4F endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-7 1860 24 98.73% 1884 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10120 ATSPS4F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0 x 10-23 126 6 2 141 95.45% 98.60% 132 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-22'
Avg. expression score for this sample: '29.0982'
Avg. expression score in LCM sample: '5.98205'
Tissue used: 'full endosperm'
AT4G10120 ATSPS4F endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2796 x 10-2 466 13 97.29% 479 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10120 ATSPS4F endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10115 SCRL20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10115 SCRL20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10115 SCRL20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10115 SCRL20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10115 SCRL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10115 SCRL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10112 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10112 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10112 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10112 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10112 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10112 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.99762 x 10-1 38 43 22 23 46.91% 51.11% 81 45 TAIR8 Avg. embryo expression (dissected): '115.061'
Avg. embryo expression (LCM): '73.0281'
AT4G10110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 47 22 26 47 68.12% 64.38% 69 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.411675'
Avg. expression score for this sample: '88.5364'
Avg. expression score in LCM sample: '52.0306'
Tissue used: 'pure endosperm, no chalazal'
AT4G10110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-10 288 33 89.72% 321 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32687 x 10-1 79 31 24 67 71.82% 73.63% 110 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.411675'
Avg. expression score for this sample: '134.104'
Avg. expression score in LCM sample: '52.0306'
Tissue used: 'full endosperm'
AT4G10110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.44428 x 10-1 19 3 86.36% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9214 x 10-2 113 31 78.47% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10100 CNX7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10100 CNX7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10100 CNX7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10100 CNX7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.1728'
Avg. embryo expression (LCM): '48.6268'
AT4G10100 CNX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.0203'
Avg. expression score in LCM sample: '27.2205'
Tissue used: 'pure endosperm, no chalazal'
AT4G10100 CNX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.3997'
Avg. expression score in LCM sample: '27.2205'
Tissue used: 'full endosperm'
AT4G10090 ELP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 4 0 0 4 100.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '28.9962'
Avg. expression score in LCM sample: '14.6538'
Tissue used: 'full endosperm'
AT4G10090 ELP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10090 ELP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10090 ELP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 1 60.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '25.056'
Avg. expression score in LCM sample: '14.6538'
Tissue used: 'pure endosperm, no chalazal'
AT4G10090 ELP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10090 ELP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 3 1 0 0.00% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '35.2302'
Avg. embryo expression (LCM): '42.1215'
AT4G10080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.27304 x 10-1 567 544 188 221 51.04% 54.03% 1111 409 TAIR8 Avg. embryo expression (dissected): '2567.15'
Avg. embryo expression (LCM): '732.441'
AT4G10080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.26 x 10-4 815 355 315 895 69.66% 73.97% 1170 1210 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2824.78'
Avg. expression score in LCM sample: '901.32'
Tissue used: 'pure endosperm, no chalazal'
AT4G10080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 5895 539 91.62% 6434 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2230 590 899 3381 79.08% 79.00% 2820 4280 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3217.02'
Avg. expression score in LCM sample: '901.32'
Tissue used: 'full endosperm'
AT4G10080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 3650 576 86.37% 4226 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0 x 10-7 701 128 84.56% 829 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.80189 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.05766 x 10-1 76 33 69.72% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9883 x 10-2 158 32 83.16% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 40 26 31 16 60.61% 34.04% 66 47 TAIR8 Avg. embryo expression (dissected): '126.122'
Avg. embryo expression (LCM): '60.9217'
AT4G10070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.72745 x 10-1 35 15 20 46 70.00% 69.70% 50 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039356'
Avg. expression score for this sample: '71.3624'
Avg. expression score in LCM sample: '24.2075'
Tissue used: 'pure endosperm, no chalazal'
AT4G10070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7228 x 10-2 67 21 13 60 76.14% 82.19% 88 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039356'
Avg. expression score for this sample: '58.3332'
Avg. expression score in LCM sample: '24.2075'
Tissue used: 'full endosperm'
AT4G10060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-14 72 1 0 58 98.63% 100.00% 73 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.4e-15'
Avg. expression score for this sample: '64.6952'
Avg. expression score in LCM sample: '3.48341'
Tissue used: 'full endosperm'
AT4G10060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.22638 x 10-1 156 1 99.36% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0291 x 10-2 23 2 0 3 92.00% 100.00% 25 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.4e-15'
Avg. expression score for this sample: '25.7514'
Avg. expression score in LCM sample: '3.48341'
Tissue used: 'pure endosperm, no chalazal'
AT4G10060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.09601 x 10-1 310 3 99.04% 313 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.94912 x 10-1 9 18 2 1 33.33% 33.33% 27 3 TAIR8 Avg. embryo expression (dissected): '34.3646'
Avg. embryo expression (LCM): '8.4896'
AT4G10050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 3 33.33% 75.00% 3 4 TAIR8 Avg. embryo expression (dissected): '31.5744'
Avg. embryo expression (LCM): '25.7451'
AT4G10050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.88168 x 10-1 1 6 0 6 14.29% 100.00% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.665814'
Avg. expression score for this sample: '21.7727'
Avg. expression score in LCM sample: '18.975'
Tissue used: 'pure endosperm, no chalazal'
AT4G10050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3837 x 10-2 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.32822 x 10-1 11 6 2 18 64.71% 90.00% 17 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.665814'
Avg. expression score for this sample: '45.0778'
Avg. expression score in LCM sample: '18.975'
Tissue used: 'full endosperm'
AT4G10050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.216 x 10-3 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10040 CYTC-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.91866 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10040 CYTC-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10040 CYTC-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10040 CYTC-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '24.3631'
Avg. embryo expression (LCM): '5.80206'
AT4G10040 CYTC-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '29.0938'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'pure endosperm, no chalazal'
AT4G10040 CYTC-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 6 0 1 6 100.00% 85.71% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '60.0227'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'full endosperm'
AT4G10030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.9754 x 10-2 57 37 48 58 60.64% 54.72% 94 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027243'
Avg. expression score for this sample: '87.2413'
Avg. expression score in LCM sample: '29.9397'
Tissue used: 'full endosperm'
AT4G10030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.492 x 10-3 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.28476 x 10-1 18 20 47.37% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.83811 x 10-1 40 33 16 30 54.79% 65.22% 73 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027243'
Avg. expression score for this sample: '103.697'
Avg. expression score in LCM sample: '29.9397'
Tissue used: 'pure endosperm, no chalazal'