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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G10480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1118.29'
Avg. expression score in LCM sample: '538.194'
Tissue used: 'pure endosperm, no chalazal'
AT4G10480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 5 0 12 16.67% 100.00% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.569956'
Avg. expression score for this sample: '31.5713'
Avg. expression score in LCM sample: '16.3441'
Tissue used: 'full endosperm'
AT4G10470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4472 x 10-1 8 2 0 3 80.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.569956'
Avg. expression score for this sample: '20.9393'
Avg. expression score in LCM sample: '16.3441'
Tissue used: 'pure endosperm, no chalazal'
AT4G10470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.58991 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 0 2 37.50% 100.00% 8 2 TAIR8 Avg. embryo expression (dissected): '22.6004'
Avg. embryo expression (LCM): '20.5333'
AT4G10465 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10465 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10465 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10465 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10457 SCRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10457 SCRL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10457 SCRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10457 SCRL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10457 SCRL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10457 SCRL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.07518 x 10-1 82 48 63.08% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.21788 x 10-1 631 135 544 617 82.38% 53.14% 766 1161 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149747'
Avg. expression score for this sample: '354.886'
Avg. expression score in LCM sample: '54.5587'
Tissue used: 'full endosperm'
AT4G10450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6 x 10-10 966 783 55.23% 1749 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3 x 10-15 1233 692 128 104 64.05% 44.83% 1925 232 TAIR8 Avg. embryo expression (dissected): '773.22'
Avg. embryo expression (LCM): '1365.54'
AT4G10450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1987 196 91.02% 2183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.79792 x 10-1 221 97 94 124 69.50% 56.88% 318 218 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149747'
Avg. expression score for this sample: '144.479'
Avg. expression score in LCM sample: '54.5587'
Tissue used: 'pure endosperm, no chalazal'
AT4G10440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 7 36.36% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3079 x 10-2 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6923 x 10-2 0 7 0 0 0.00% 7 0 TAIR8 Avg. embryo expression (dissected): '1.46373'
Avg. embryo expression (LCM): '0'
AT4G10440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1927 x 10-1 3 4 1 0 42.86% 0.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '1.13724'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.1066 x 10-1 28 6 8 16 82.35% 66.67% 34 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.299472'
Avg. expression score for this sample: '164.031'
Avg. expression score in LCM sample: '34.6871'
Tissue used: 'full endosperm'
AT4G10430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 6 10 2 1 37.50% 33.33% 16 3 TAIR8 Avg. embryo expression (dissected): '94.2767'
Avg. embryo expression (LCM): '79.6465'
AT4G10430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.93564 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 3 6 72.73% 66.67% 11 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.299472'
Avg. expression score for this sample: '81.3866'
Avg. expression score in LCM sample: '34.6871'
Tissue used: 'pure endosperm, no chalazal'
AT4G10430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.54712 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.04579 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.2948'
Avg. expression score in LCM sample: '6.14373'
Tissue used: 'full endosperm'
AT4G10420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.0792'
Avg. expression score in LCM sample: '6.14373'
Tissue used: 'pure endosperm, no chalazal'
AT4G10420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.5493'
Avg. embryo expression (LCM): '13.9903'
AT4G10420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-8 47 0 100.00% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 1 9 0 1 10.00% 100.00% 10 1 TAIR8 Avg. embryo expression (dissected): '6.46294'
Avg. embryo expression (LCM): '4.77226'
AT4G10410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.24242 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0451 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.24848 x 10-1 12 17 0 15 41.38% 100.00% 29 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.469306'
Avg. expression score for this sample: '13.8151'
Avg. expression score in LCM sample: '3.71857'
Tissue used: 'full endosperm'
AT4G10410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.30265 x 10-1 2 9 1 9 18.18% 90.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.469306'
Avg. expression score for this sample: '12.773'
Avg. expression score in LCM sample: '3.71857'
Tissue used: 'pure endosperm, no chalazal'
AT4G10400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '10.6784'
Avg. expression score in LCM sample: '11.0234'
Tissue used: 'pure endosperm, no chalazal'
AT4G10400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84447 x 10-1 11 4 2 14 73.33% 87.50% 15 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '33.4361'
Avg. expression score in LCM sample: '11.0234'
Tissue used: 'full endosperm'
AT4G10400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.40158 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 0 3 33.33% 100.00% 3 3 TAIR8 Avg. embryo expression (dissected): '18.855'
Avg. embryo expression (LCM): '14.141'
AT4G10400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7143 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.22222 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 4 4 66.67% 50.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.7913'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.03833'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.87179 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.920487'
Avg. embryo expression (LCM): '2.38613'
AT4G10390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.87179 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10380 NIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10380 NIP5;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.4242'
Avg. embryo expression (LCM): '24.8409'
AT4G10380 NIP5;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10380 NIP5;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10380 NIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '56.7364'
Avg. expression score in LCM sample: '13.5662'
Tissue used: 'pure endosperm, no chalazal'
AT4G10380 NIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33222 x 10-1 6 4 4 4 60.00% 50.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '71.7654'
Avg. expression score in LCM sample: '13.5662'
Tissue used: 'full endosperm'
AT4G10370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.868177'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.40405 x 10-1 4 1 1 6 80.00% 85.71% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '5.73445'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'pure endosperm, no chalazal'
AT4G10360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6 x 10-6 26 2 7 76 92.86% 91.57% 28 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '32.8572'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'full endosperm'
AT4G10360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0645 x 10-1 94 5 94.95% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 6 1 2 2 85.71% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '8.39454'
Avg. embryo expression (LCM): '8.13796'
AT4G10360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.35919 x 10-1 149 8 94.90% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10350 NAC070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10350 NAC070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '.981744'
Avg. embryo expression (LCM): '0'
AT4G10350 NAC070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10350 NAC070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10350 NAC070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 1 2 71.43% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.47014'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10350 NAC070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10345 MIR832A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10345 MIR832A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10345 MIR832A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10345 MIR832A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10345 MIR832A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10345 MIR832A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10340 LHCB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10340 LHCB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '262.492'
Avg. expression score in LCM sample: '267.796'
Tissue used: 'full endosperm'
AT4G10340 LHCB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '306.328'
Avg. expression score in LCM sample: '267.796'
Tissue used: 'pure endosperm, no chalazal'
AT4G10340 LHCB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10340 LHCB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '650.925'
Avg. embryo expression (LCM): '519.272'
AT4G10340 LHCB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-19 539 47 91.98% 586 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8242 x 10-1 93 103 19 21 47.45% 52.50% 196 40 TAIR8 Avg. embryo expression (dissected): '211.599'
Avg. embryo expression (LCM): '212.328'