Displaying data sets 59301 - 59400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G10767 SCRL21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10767 SCRL21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10767 SCRL21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10767 SCRL21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10760 MTA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10760 MTA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10760 MTA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '385.97'
Avg. embryo expression (LCM): '284.552'
AT4G10760 MTA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10760 MTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '200.241'
Avg. expression score in LCM sample: '166.175'
Tissue used: 'pure endosperm, no chalazal'
AT4G10760 MTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '221.205'
Avg. expression score in LCM sample: '166.175'
Tissue used: 'full endosperm'
AT4G10750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54564 x 10-1 414 207 167 389 66.67% 69.96% 621 556 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864941'
Avg. expression score for this sample: '756.067'
Avg. expression score in LCM sample: '444.538'
Tissue used: 'full endosperm'
AT4G10750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.391 x 10-3 290 97 74.94% 387 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36429 x 10-1 717 776 247 274 48.02% 52.59% 1493 521 TAIR8 Avg. embryo expression (dissected): '2101.59'
Avg. embryo expression (LCM): '1505.43'
AT4G10750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.10813 x 10-1 479 314 240 595 60.40% 71.26% 793 835 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864941'
Avg. expression score for this sample: '1143.05'
Avg. expression score in LCM sample: '444.538'
Tissue used: 'pure endosperm, no chalazal'
AT4G10750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-26 499 69 87.85% 568 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.858 x 10-3 119 35 77.27% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 19 1 3 45.71% 75.00% 35 4 TAIR8 Avg. embryo expression (dissected): '88.9713'
Avg. embryo expression (LCM): '47.5719'
AT4G10730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.69409 x 10-1 67 11 85.90% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4749 x 10-1 12 7 5 22 63.16% 81.48% 19 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029479'
Avg. expression score for this sample: '59.1861'
Avg. expression score in LCM sample: '12.4932'
Tissue used: 'pure endosperm, no chalazal'
AT4G10730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2587 x 10-2 40 6 20 59 86.96% 74.68% 46 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029479'
Avg. expression score for this sample: '124.753'
Avg. expression score in LCM sample: '12.4932'
Tissue used: 'full endosperm'
AT4G10730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9288 x 10-2 71 33 68.27% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.32655 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.20276'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.39518'
Avg. embryo expression (LCM): '4.00619'
AT4G10720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.44071'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10710 SPT16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.58226 x 10-1 137 46 58 116 74.86% 66.67% 183 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001745'
Avg. expression score for this sample: '438.92'
Avg. expression score in LCM sample: '273.999'
Tissue used: 'pure endosperm, no chalazal'
AT4G10710 SPT16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 559 213 72.41% 772 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10710 SPT16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.272 x 10-3 302 85 155 352 78.04% 69.43% 387 507 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001745'
Avg. expression score for this sample: '425.853'
Avg. expression score in LCM sample: '273.999'
Tissue used: 'full endosperm'
AT4G10710 SPT16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.53937 x 10-1 90 84 31 30 51.72% 49.18% 174 61 TAIR8 Avg. embryo expression (dissected): '472.823'
Avg. embryo expression (LCM): '415.739'
AT4G10710 SPT16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4 x 10-8 602 122 83.15% 724 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10710 SPT16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.89818 x 10-1 91 25 78.45% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.73337'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'pure endosperm, no chalazal'
AT4G10700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.900964'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'full endosperm'
AT4G10695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '2.313'
Avg. expression score in LCM sample: '12.5226'
Tissue used: 'full endosperm'
AT4G10695 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10695 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.734258'
Avg. expression score in LCM sample: '12.5226'
Tissue used: 'pure endosperm, no chalazal'
AT4G10695 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.165 x 10-3 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10695 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.91667 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.1342 x 10-2 3 12 1 0 20.00% 0.00% 15 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016908'
Avg. expression score for this sample: '5.62238'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'pure endosperm, no chalazal'
AT4G10680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-5 23 3 88.46% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.92075 x 10-1 3 4 0 0 42.86% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016908'
Avg. expression score for this sample: '1.32064'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'full endosperm'
AT4G10680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10670 GTC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.56545'
Avg. embryo expression (LCM): '0'
AT4G10670 GTC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.85723 x 10-1 381 293 56.53% 674 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10670 GTC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 4 3 9 69.23% 75.00% 13 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.72672'
Avg. expression score in LCM sample: '13.4045'
Tissue used: 'pure endosperm, no chalazal'
AT4G10670 GTC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.86131 x 10-1 2 1 4 0 66.67% 0.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.26059'
Avg. expression score in LCM sample: '13.4045'
Tissue used: 'full endosperm'
AT4G10670 GTC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.892 x 10-3 114 19 85.71% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10670 GTC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.30878'
Avg. expression score in LCM sample: '9.25969'
Tissue used: 'full endosperm'
AT4G10660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G10660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.6906'
Avg. expression score in LCM sample: '9.25969'
Tissue used: 'pure endosperm, no chalazal'
AT4G10650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.78369'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.96503 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 2 3 50.00% 60.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.59975'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 1 40.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '1.75597'
Avg. embryo expression (LCM): '5.06111'
AT4G10650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3344 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10640 IQD16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.645 x 10-3 37 41 47.44% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10640 IQD16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.687 x 10-3 73 18 80.22% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10640 IQD16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.7202 x 10-1 76 52 20 13 59.38% 39.39% 128 33 TAIR8 Avg. embryo expression (dissected): '47.2624'
Avg. embryo expression (LCM): '57.6188'
AT4G10640 IQD16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.384 x 10-3 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10640 IQD16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.15185 x 10-1 667 230 363 474 74.36% 56.63% 897 837 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068813'
Avg. expression score for this sample: '354.434'
Avg. expression score in LCM sample: '212.238'
Tissue used: 'pure endosperm, no chalazal'
AT4G10640 IQD16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8168 x 10-2 542 155 416 431 77.76% 50.89% 697 847 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068813'
Avg. expression score for this sample: '204.629'
Avg. expression score in LCM sample: '212.238'
Tissue used: 'full endosperm'
AT4G10630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.18646 x 10-1 91 80 92 285 53.22% 75.60% 171 377 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00466'
Avg. expression score for this sample: '388.713'
Avg. expression score in LCM sample: '1307.29'
Tissue used: 'full endosperm'
AT4G10630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.80973 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.22026 x 10-1 137 108 39 51 55.92% 56.67% 245 90 TAIR8 Avg. embryo expression (dissected): '848.443'
Avg. embryo expression (LCM): '579.151'
AT4G10630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.658 x 10-3 327 260 197 817 55.71% 80.57% 587 1014 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00466'
Avg. expression score for this sample: '1866.58'
Avg. expression score in LCM sample: '1307.29'
Tissue used: 'pure endosperm, no chalazal'
AT4G10630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-5 53 4 92.98% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.92082 x 10-1 58 16 78.38% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.36751 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.92 x 10-4 103 7 93.64% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 4 8 73.33% 66.67% 15 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18213'
Avg. expression score for this sample: '218.398'
Avg. expression score in LCM sample: '131.517'
Tissue used: 'pure endosperm, no chalazal'
AT4G10620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.89 x 10-4 34 33 50.75% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.68777 x 10-1 39 6 13 26 86.67% 66.67% 45 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18213'
Avg. expression score for this sample: '303.347'
Avg. expression score in LCM sample: '131.517'
Tissue used: 'full endosperm'
AT4G10620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 9 8 7 2 52.94% 22.22% 17 9 TAIR8 Avg. embryo expression (dissected): '538.816'
Avg. embryo expression (LCM): '577.657'
AT4G10613 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.31964'
Avg. embryo expression (LCM): '2.8508'
AT4G10613 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10613 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G10613 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.822401'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G10613 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10613 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'