Displaying data sets 59101 - 59200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G11080 3xHMG-box1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.346 x 10-2 179 73 71.03% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11080 3xHMG-box1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.848 x 10-3 4 10 28.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11080 3xHMG-box1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.46339 x 10-1 148 71 194 336 67.58% 63.40% 219 530 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.376156'
Avg. expression score for this sample: '309.204'
Avg. expression score in LCM sample: '73.2691'
Tissue used: 'full endosperm'
AT4G11080 3xHMG-box1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4478 x 10-1 212 135 61.10% 347 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11080 3xHMG-box1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.1835 x 10-1 117 53 43 60 68.82% 58.25% 170 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.376156'
Avg. expression score for this sample: '206.527'
Avg. expression score in LCM sample: '73.2691'
Tissue used: 'pure endosperm, no chalazal'
AT4G11080 3xHMG-box1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.26361 x 10-1 155 143 40 36 52.01% 47.37% 298 76 TAIR8 Avg. embryo expression (dissected): '379.323'
Avg. embryo expression (LCM): '360.921'
AT4G11070 WRKY41 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.22075 x 10-1 235 51 147 10 82.17% 6.37% 286 157 TAIR8 Avg. embryo expression (dissected): '195.8'
Avg. embryo expression (LCM): '50.498'
AT4G11070 WRKY41 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-7 12 35 25.53% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11070 WRKY41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.93699 x 10-1 266 14 109 5 95.00% 4.39% 280 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.531645'
Avg. expression score for this sample: '104.1'
Avg. expression score in LCM sample: '53.0301'
Tissue used: 'pure endosperm, no chalazal'
AT4G11070 WRKY41 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.96 x 10-3 1 6 14.29% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11070 WRKY41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-12 66 0 100.00% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11070 WRKY41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7088 x 10-2 87 12 65 9 87.88% 12.16% 99 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.531645'
Avg. expression score for this sample: '29.5514'
Avg. expression score in LCM sample: '53.0301'
Tissue used: 'full endosperm'
AT4G11060 MTSSB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7009 x 10-1 19 8 16 17 70.37% 51.52% 27 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.881413'
Avg. expression score for this sample: '28.0267'
Avg. expression score in LCM sample: '13.2722'
Tissue used: 'full endosperm'
AT4G11060 MTSSB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.07611 x 10-1 21 6 5 8 77.78% 61.54% 27 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.881413'
Avg. expression score for this sample: '35.4355'
Avg. expression score in LCM sample: '13.2722'
Tissue used: 'pure endosperm, no chalazal'
AT4G11060 MTSSB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.06458 x 10-1 34 25 5 3 57.63% 37.50% 59 8 TAIR8 Avg. embryo expression (dissected): '70.8134'
Avg. embryo expression (LCM): '95.734'
AT4G11060 MTSSB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.49301 x 10-1 44 13 77.19% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11060 MTSSB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.13957 x 10-1 49 14 77.78% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11060 MTSSB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11050 GH9C3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11050 GH9C3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11050 GH9C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 1 0 0 80.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.936249'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11050 GH9C3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11050 GH9C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11050 GH9C3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 7 4 1 1 63.64% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '5.6643'
Avg. embryo expression (LCM): '1.98426'
AT4G11040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '16.7842'
Avg. embryo expression (LCM): '13.7265'
AT4G11040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '14.435'
Avg. expression score in LCM sample: '1.60207'
Tissue used: 'pure endosperm, no chalazal'
AT4G11040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '7.53239'
Avg. expression score in LCM sample: '1.60207'
Tissue used: 'full endosperm'
AT4G11030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.084323'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11010 NDPK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 0 2 42.86% 100.00% 7 2 TAIR8 Avg. embryo expression (dissected): '64.8406'
Avg. embryo expression (LCM): '86.4784'
AT4G11010 NDPK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11010 NDPK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '56.2677'
Avg. expression score in LCM sample: '34.7459'
Tissue used: 'pure endosperm, no chalazal'
AT4G11010 NDPK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.05229 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11010 NDPK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.38095 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11010 NDPK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.40405 x 10-1 3 0 2 7 100.00% 77.78% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '124.422'
Avg. expression score in LCM sample: '34.7459'
Tissue used: 'full endosperm'
AT4G11000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.86217'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.4244'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.953437'
Avg. embryo expression (LCM): '1.0298'
AT4G11000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '506.647'
Avg. expression score in LCM sample: '69.2272'
Tissue used: 'full endosperm'
AT4G10970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '824.419'
Avg. expression score in LCM sample: '69.2272'
Tissue used: 'pure endosperm, no chalazal'
AT4G10970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '860.937'
Avg. embryo expression (LCM): '488.315'
AT4G10960 UGE5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.89433 x 10-1 22 25 10 5 46.81% 33.33% 47 15 TAIR8 Avg. embryo expression (dissected): '389.79'
Avg. embryo expression (LCM): '372.462'
AT4G10960 UGE5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.091 x 10-3 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10960 UGE5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-13 232 3 98.72% 235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10960 UGE5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4075 x 10-2 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10960 UGE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.1798 x 10-2 43 2 15 28 95.56% 65.12% 45 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175516'
Avg. expression score for this sample: '168.335'
Avg. expression score in LCM sample: '117.363'
Tissue used: 'full endosperm'
AT4G10960 UGE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 25 6 10 3 80.65% 23.08% 31 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175516'
Avg. expression score for this sample: '164.898'
Avg. expression score in LCM sample: '117.363'
Tissue used: 'pure endosperm, no chalazal'
AT4G10955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.60513 x 10-1 26 6 17 8 81.25% 32.00% 32 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '68.3733'
Avg. expression score in LCM sample: '5.48232'
Tissue used: 'pure endosperm, no chalazal'
AT4G10955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.91787 x 10-1 26 0 17 16 100.00% 48.48% 26 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '106.546'
Avg. expression score in LCM sample: '5.48232'
Tissue used: 'full endosperm'
AT4G10955 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.64 x 10-4 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10955 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05249 x 10-1 26 17 8 5 60.47% 38.46% 43 13 TAIR8 Avg. embryo expression (dissected): '123.33'
Avg. embryo expression (LCM): '210.871'
AT4G10955 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8045 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10955 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-15 171 3 98.28% 174 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3245 x 10-2 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.17675 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.38433 x 10-1 3 2 1 11 60.00% 91.67% 5 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053831'
Avg. expression score for this sample: '2.90322'
Avg. expression score in LCM sample: '14.5362'
Tissue used: 'full endosperm'
AT4G10950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.12724 x 10-1 7 13 4 55 35.00% 93.22% 20 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053831'
Avg. expression score for this sample: '17.3622'
Avg. expression score in LCM sample: '14.5362'
Tissue used: 'pure endosperm, no chalazal'
AT4G10950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.92506 x 10-1 2 52 0 35 3.70% 100.00% 54 35 TAIR8 Avg. embryo expression (dissected): '41.969'
Avg. embryo expression (LCM): '14.3419'
AT4G10950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8773 x 10-2 166 23 87.83% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '67.6109'
Avg. embryo expression (LCM): '32.9914'
AT4G10940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.8996'
Avg. expression score in LCM sample: '23.1639'
Tissue used: 'pure endosperm, no chalazal'
AT4G10940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '83.2944'
Avg. expression score in LCM sample: '23.1639'
Tissue used: 'full endosperm'
AT4G10930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.217 x 10-3 95 18 31 84 84.07% 73.04% 113 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011615'
Avg. expression score for this sample: '166.919'
Avg. expression score in LCM sample: '36.5096'
Tissue used: 'full endosperm'
AT4G10930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.60737 x 10-1 32 13 10 19 71.11% 65.52% 45 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011615'
Avg. expression score for this sample: '84.4159'
Avg. expression score in LCM sample: '36.5096'
Tissue used: 'pure endosperm, no chalazal'
AT4G10930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.47465 x 10-1 14 20 9 7 41.18% 43.75% 34 16 TAIR8 Avg. embryo expression (dissected): '93.4417'
Avg. embryo expression (LCM): '49.7445'
AT4G10930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7451 x 10-1 75 19 79.79% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-7 132 7 94.96% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0382 x 10-1 15 6 71.43% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10925 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.91607 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10925 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.101 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.28282 x 10-1 4 0 8 5 100.00% 38.46% 4 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.5907'
Avg. expression score in LCM sample: '15.4181'
Tissue used: 'pure endosperm, no chalazal'
AT4G10925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.11194 x 10-1 8 2 2 6 80.00% 75.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.1351'
Avg. expression score in LCM sample: '15.4181'
Tissue used: 'full endosperm'
AT4G10925 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10925 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 8 1 2 0 88.89% 0.00% 9 2 TAIR8 Avg. embryo expression (dissected): '11.4397'
Avg. embryo expression (LCM): '16.4643'
AT4G10920 KELP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6921 x 10-2 219 124 53 19 63.85% 26.39% 343 72 TAIR8 Avg. embryo expression (dissected): '435.574'
Avg. embryo expression (LCM): '397.969'
AT4G10920 KELP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-10 440 58 88.35% 498 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10920 KELP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 741 53 93.32% 794 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G10920 KELP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.19569 x 10-1 200 49 80.32% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'