Displaying data sets 59001 - 59100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G11216 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11216 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.0136'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11216 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11216 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11213 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11213 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11213 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11213 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11213 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11213 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11211 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11211 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11211 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11211 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.512544'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 137 0 100.00% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.70087 x 10-1 605 2 99.67% 607 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.2508 x 10-2 6 0 0 4 100.00% 100.00% 6 4 TAIR8 Avg. embryo expression (dissected): '32.4671'
Avg. embryo expression (LCM): '0'
AT4G11180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.9 x 10-17 55 0 0 92 100.00% 100.00% 55 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '193.206'
Avg. expression score in LCM sample: '2.05771'
Tissue used: 'pure endosperm, no chalazal'
AT4G11180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 149 0 1 589 100.00% 99.83% 149 590 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '657.848'
Avg. expression score in LCM sample: '2.05771'
Tissue used: 'full endosperm'
AT4G11180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.80955 x 10-1 1021 4 99.61% 1025 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11177 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11177 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11177 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11177 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11177 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11177 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '122.436'
Avg. expression score in LCM sample: '9.99458'
Tissue used: 'full endosperm'
AT4G11175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.7032'
Avg. expression score in LCM sample: '9.99458'
Tissue used: 'pure endosperm, no chalazal'
AT4G11175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '108.442'
Avg. embryo expression (LCM): '222.124'
AT4G11170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.680058'
Avg. embryo expression (LCM): '0'
AT4G11170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5283 x 10-1 23 29 44.23% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.161079'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.57143 x 10-1 4 9 30.77% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.157406'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.66 x 10-4 353 103 77.41% 456 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.72876 x 10-1 1235 568 591 1015 68.50% 63.20% 1803 1606 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000057'
Avg. expression score for this sample: '787.158'
Avg. expression score in LCM sample: '213.326'
Tissue used: 'pure endosperm, no chalazal'
AT4G11160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5 x 10-11 1167 393 408 1149 74.81% 73.80% 1560 1557 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000057'
Avg. expression score for this sample: '424.645'
Avg. expression score in LCM sample: '213.326'
Tissue used: 'full endosperm'
AT4G11160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.09975 x 10-1 891 781 311 247 53.29% 44.27% 1672 558 TAIR8 Avg. embryo expression (dissected): '1007.17'
Avg. embryo expression (LCM): '584.15'
AT4G11160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-30 1425 284 83.38% 1709 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2213 189 92.13% 2402 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11150 TUF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6353 722 89.80% 7075 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11150 TUF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.63348 x 10-1 428 478 124 144 47.24% 53.73% 906 268 TAIR8 Avg. embryo expression (dissected): '958.354'
Avg. embryo expression (LCM): '548.207'
AT4G11150 TUF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.1532 x 10-2 556 314 202 638 63.91% 75.95% 870 840 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '945.855'
Avg. expression score in LCM sample: '543.514'
Tissue used: 'pure endosperm, no chalazal'
AT4G11150 TUF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1302 345 447 2444 79.05% 84.54% 1647 2891 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1233.85'
Avg. expression score in LCM sample: '543.514'
Tissue used: 'full endosperm'
AT4G11150 TUF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5604 x 10-2 5198 1253 80.58% 6451 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11150 TUF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.35555 x 10-1 464 107 81.26% 571 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11140 CRF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11140 CRF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11140 CRF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 3 0 85.71% 0.00% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.3976'
Avg. expression score in LCM sample: '24.5749'
Tissue used: 'pure endosperm, no chalazal'
AT4G11140 CRF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11140 CRF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4816 x 10-1 11 5 2 7 68.75% 77.78% 16 9 TAIR8 Avg. embryo expression (dissected): '52.5194'
Avg. embryo expression (LCM): '65.4427'
AT4G11140 CRF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.50338'
Avg. expression score in LCM sample: '24.5749'
Tissue used: 'full endosperm'
AT4G11130 RDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2547 x 10-1 73 40 47 96 64.60% 67.13% 113 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.581977'
Avg. expression score for this sample: '103.807'
Avg. expression score in LCM sample: '86.1004'
Tissue used: 'full endosperm'
AT4G11130 RDR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-5 78 13 85.71% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11130 RDR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.76874 x 10-1 41 14 74.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11130 RDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.42219 x 10-1 65 43 35 70 60.19% 66.67% 108 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.581977'
Avg. expression score for this sample: '96.1096'
Avg. expression score in LCM sample: '86.1004'
Tissue used: 'pure endosperm, no chalazal'
AT4G11130 RDR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.10996 x 10-1 65 62 19 13 51.18% 40.62% 127 32 TAIR8 Avg. embryo expression (dissected): '94.1388'
Avg. embryo expression (LCM): '108.544'
AT4G11130 RDR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.44731 x 10-1 21 4 84.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09909 x 10-1 18 20 10 1 47.37% 9.09% 38 11 TAIR8 Avg. embryo expression (dissected): '40.9607'
Avg. embryo expression (LCM): '100.77'
AT4G11120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5478 x 10-2 156 39 80.00% 195 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23876 x 10-1 83 22 47 88 79.05% 65.19% 105 135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.322752'
Avg. expression score for this sample: '91.376'
Avg. expression score in LCM sample: '19.8275'
Tissue used: 'full endosperm'
AT4G11120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-9 210 20 91.30% 230 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 11 4 17 59.26% 80.95% 27 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.322752'
Avg. expression score for this sample: '20.8807'
Avg. expression score in LCM sample: '19.8275'
Tissue used: 'pure endosperm, no chalazal'
AT4G11110 SPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1486 x 10-2 195 39 59 86 83.33% 59.31% 234 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '111.556'
Avg. expression score in LCM sample: '68.7275'
Tissue used: 'pure endosperm, no chalazal'
AT4G11110 SPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.663 x 10-3 289 88 76 188 76.66% 71.21% 377 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '175.673'
Avg. expression score in LCM sample: '68.7275'
Tissue used: 'full endosperm'
AT4G11110 SPA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.47712 x 10-1 103 54 38 21 65.61% 35.59% 157 59 TAIR8 Avg. embryo expression (dissected): '107.45'
Avg. embryo expression (LCM): '76.5069'
AT4G11110 SPA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-5 93 9 91.18% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11110 SPA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-19 371 23 94.16% 394 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11110 SPA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.46733 x 10-1 40 12 76.92% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.19217 x 10-1 21 7 75.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.65 x 10-4 305 243 55.66% 548 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.93563 x 10-1 198 228 84 77 46.48% 47.83% 426 161 TAIR8 Avg. embryo expression (dissected): '288.83'
Avg. embryo expression (LCM): '327.477'
AT4G11100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.7287 x 10-2 131 94 54 81 58.22% 60.00% 225 135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.146411'
Avg. expression score for this sample: '116.655'
Avg. expression score in LCM sample: '26.0447'
Tissue used: 'pure endosperm, no chalazal'
AT4G11100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.04725 x 10-1 236 171 170 419 57.99% 71.14% 407 589 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.146411'
Avg. expression score for this sample: '216.729'
Avg. expression score in LCM sample: '26.0447'
Tissue used: 'full endosperm'
AT4G11100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-5 319 104 75.41% 423 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11090 TBL23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11090 TBL23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '100.05'
Avg. expression score in LCM sample: '46.5924'
Tissue used: 'pure endosperm, no chalazal'
AT4G11090 TBL23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11090 TBL23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '90.7365'
Avg. embryo expression (LCM): '62.3157'
AT4G11090 TBL23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '64.5968'
Avg. expression score in LCM sample: '46.5924'
Tissue used: 'full endosperm'
AT4G11090 TBL23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'