| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G405203 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 5 | 0 | 0.00% | 0.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G405203 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 0 | 1 | 50.00% | 100.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G405178 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 384 | 80 | 329 | 70 | 82.76% | 17.54% | 464 | 399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.90e-38' Biased in favor of strain: 'B73' |
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| GRMZM2G405178 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 9.58 x 10-5 | 84 | 77 | 39 | 27 | 52.17% | 40.91% | 161 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000958' χ2 p-value for Mo17 x B73: '9.04e-06' Biased in favor of strain: '' |
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| GRMZM2G405133 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 10 | 6 | 6 | 10 | 62.50% | 62.50% | 16 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G405133 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.262666 x 10-1 | 43 | 18 | 40 | 61 | 70.49% | 60.40% | 61 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5262666' χ2 p-value for Mo17 x B73: '.1812762' Biased in favor of strain: '' |
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| GRMZM2G405094 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.710934 x 10-1 | 10 | 5 | 8 | 12 | 66.67% | 60.00% | 15 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: '' |
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| GRMZM2G405094 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.719641 x 10-1 | 121 | 20 | 25 | 52 | 85.82% | 67.53% | 141 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.41e-06' χ2 p-value for Mo17 x B73: '.8719641' Biased in favor of strain: '' |
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| GRMZM2G405090 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4053 x 10-3 | 56 | 29 | 107 | 29 | 65.88% | 21.32% | 85 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0034053' χ2 p-value for Mo17 x B73: '2.26e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G405090 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 3 | 100.00% | 100.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G405071 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 8 | 16 | 5 | 5 | 33.33% | 50.00% | 24 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G405071 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G405064 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.22 x 10-9 | 0 | 55 | 0 | 33 | 0.00% | 100.00% | 55 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-13' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G405064 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1 | 336 | 1 | 636 | 0.30% | 99.84% | 337 | 637 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G405022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 1 | 8 | 5 | 88.89% | 38.46% | 9 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: '' |
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| GRMZM2G405022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.96 x 10-4 | 23 | 0 | 22 | 1 | 100.00% | 4.35% | 23 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000696' χ2 p-value for Mo17 x B73: '2.30e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G405017 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 3 | 4 | 62.50% | 57.14% | 8 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G405017 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G404977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G404977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G404973 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.81 x 10-5 | 139 | 49 | 129 | 72 | 73.94% | 35.82% | 188 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.24e-11' χ2 p-value for Mo17 x B73: '.0000581' Biased in favor of strain: 'B73' |
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| GRMZM2G404973 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.331212 x 10-1 | 59 | 23 | 24 | 47 | 71.95% | 66.20% | 82 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.310063' χ2 p-value for Mo17 x B73: '.9331212' Biased in favor of strain: '' |
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| GRMZM2G404941 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G404941 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G404922 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.36516 x 10-2 | 17 | 33 | 11 | 38 | 34.00% | 77.55% | 50 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0236516' χ2 p-value for Mo17 x B73: '.0001147' Biased in favor of strain: 'Mo17' |
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| GRMZM2G404922 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22 x 10-17 | 5 | 87 | 2 | 156 | 5.43% | 98.73% | 92 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.25e-35' χ2 p-value for Mo17 x B73: '1.22e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G404897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53 x 10-26 | 755 | 338 | 708 | 363 | 69.08% | 33.89% | 1093 | 1071 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-36' χ2 p-value for Mo17 x B73: '5.53e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G404897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.168921 x 10-1 | 386 | 297 | 181 | 396 | 56.52% | 68.63% | 683 | 577 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.82e-08' χ2 p-value for Mo17 x B73: '.3168921' Biased in favor of strain: '' |
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| GRMZM2G404888 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.56 x 10-10 | 92 | 10 | 72 | 13 | 90.20% | 15.29% | 102 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.69e-16' χ2 p-value for Mo17 x B73: '1.56e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G404888 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 4 | 29 | 14.29% | 87.88% | 7 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032832' χ2 p-value for Mo17 x B73: '.0097401' Biased in favor of strain: '' |
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| GRMZM2G404769 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 2 | 0 | 100.00% | 0.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G404769 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 0 | 100.00% | 0.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G404702 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850494 x 10-1 | 9 | 5 | 16 | 4 | 64.29% | 20.00% | 14 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: '' |
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| GRMZM2G404702 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.202249 x 10-1 | 19 | 16 | 24 | 25 | 54.29% | 51.02% | 35 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1202249' χ2 p-value for Mo17 x B73: '.0201603' Biased in favor of strain: '' |
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| GRMZM2G404647 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.400846 x 10-1 | 79 | 53 | 49 | 40 | 59.85% | 44.94% | 132 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0236351' χ2 p-value for Mo17 x B73: '.3400846' Biased in favor of strain: '' |
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| GRMZM2G404647 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.44055 x 10-2 | 74 | 23 | 32 | 38 | 76.29% | 54.29% | 97 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0444055' χ2 p-value for Mo17 x B73: '.0279918' Biased in favor of strain: '' |
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| GRMZM2G404608 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.58 x 10-12 | 77 | 12 | 75 | 4 | 86.52% | 5.06% | 89 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.58e-12' χ2 p-value for Mo17 x B73: '1.37e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G404608 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 13 | 2 | 3 | 3 | 86.67% | 50.00% | 15 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G404603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-10 | 467 | 265 | 199 | 90 | 63.80% | 31.14% | 732 | 289 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.26e-14' χ2 p-value for Mo17 x B73: '1.44e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G404603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.904301 x 10-1 | 24 | 6 | 18 | 24 | 80.00% | 57.14% | 30 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1213403' χ2 p-value for Mo17 x B73: '.1904301' Biased in favor of strain: '' |
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| GRMZM2G404599 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.33 x 10-5 | 16 | 0 | 28 | 4 | 100.00% | 12.50% | 16 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'B73' |
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| GRMZM2G404599 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.37 x 10-9 | 83 | 2 | 37 | 8 | 97.65% | 17.78% | 85 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-09' χ2 p-value for Mo17 x B73: '3.48e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G404443 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 3 | 3 | 20.00% | 50.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G404443 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 3 | 3 | 75.00% | 50.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G404426 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.170439 x 10-1 | 28 | 17 | 25 | 17 | 62.22% | 40.48% | 45 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1010503' χ2 p-value for Mo17 x B73: '.2170439' Biased in favor of strain: '' |
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| GRMZM2G404426 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.80834 x 10-2 | 10 | 1 | 15 | 11 | 90.91% | 42.31% | 11 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.008418' Biased in favor of strain: '' |
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| GRMZM2G404377 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22535 x 10-1 | 242 | 156 | 217 | 186 | 60.80% | 46.15% | 398 | 403 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000163' χ2 p-value for Mo17 x B73: '.122535' Biased in favor of strain: '' |
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| GRMZM2G404377 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.28 x 10-5 | 278 | 79 | 192 | 265 | 77.87% | 57.99% | 357 | 457 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.10e-06' χ2 p-value for Mo17 x B73: '.0000828' Biased in favor of strain: 'B73' |
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| GRMZM2G404375 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 14 | 1 | 5 | 17.65% | 83.33% | 17 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G404375 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 1 | 13 | 85.71% | 92.86% | 7 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.0376353' Biased in favor of strain: '' |
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| GRMZM2G404132 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 3 | 3 | 75.00% | 50.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G404132 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 2 | 0 | 0.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G404081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.086678 x 10-1 | 12 | 19 | 15 | 24 | 38.71% | 61.54% | 31 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2086678' χ2 p-value for Mo17 x B73: '.1495413' Biased in favor of strain: '' |
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| GRMZM2G404081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G404078 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 1 | 1 | 55.56% | 50.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G404078 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 6 | 2 | 100.00% | 25.00% | 8 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G404011 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 10 | 0 | 100.00% | 0.00% | 7 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G404011 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G403915 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.33 x 10-17 | 217 | 56 | 150 | 36 | 79.49% | 19.35% | 273 | 186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.95e-22' χ2 p-value for Mo17 x B73: '6.33e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G403915 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.36 x 10-22 | 427 | 62 | 218 | 110 | 87.32% | 33.54% | 489 | 328 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.36e-22' χ2 p-value for Mo17 x B73: '4.12e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G403797 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.79487 x 10-1 | 91 | 84 | 86 | 88 | 52.00% | 50.57% | 175 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5967012' χ2 p-value for Mo17 x B73: '.879487' Biased in favor of strain: '' |
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| GRMZM2G403797 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.41948 x 10-1 | 178 | 111 | 78 | 190 | 61.59% | 70.90% | 289 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0672133' χ2 p-value for Mo17 x B73: '.141948' Biased in favor of strain: '' |
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| GRMZM2G403740 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403740 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403719 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.388827 x 10-1 | 19 | 17 | 27 | 19 | 52.78% | 41.30% | 36 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.2381849' Biased in favor of strain: '' |
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| GRMZM2G403719 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.35 x 10-6 | 65 | 5 | 63 | 9 | 92.86% | 12.50% | 70 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.35e-06' χ2 p-value for Mo17 x B73: '1.84e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G403664 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G403664 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403620 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 397 | 95 | 385 | 94 | 80.69% | 19.62% | 492 | 479 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G403620 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403609 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2904 x 10-3 | 98 | 56 | 108 | 72 | 63.64% | 40.00% | 154 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007132' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'B73' |
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| GRMZM2G403609 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.940326 x 10-1 | 46 | 8 | 13 | 31 | 85.19% | 70.45% | 54 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038927' χ2 p-value for Mo17 x B73: '.5940326' Biased in favor of strain: '' |
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| GRMZM2G403475 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518296 x 10-1 | 19 | 21 | 15 | 4 | 47.50% | 21.05% | 40 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518296' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: '' |
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| GRMZM2G403475 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403454 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 3 | 7 | 4 | 8 | 30.00% | 66.67% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G403454 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 1 | 11 | 33.33% | 91.67% | 6 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: '' |
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| GRMZM2G403407 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 4 | 66.67% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G403407 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G403313 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.008964 x 10-1 | 24 | 37 | 29 | 32 | 39.34% | 52.46% | 61 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0960167' χ2 p-value for Mo17 x B73: '.7008964' Biased in favor of strain: '' |
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| GRMZM2G403313 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G403190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.87 x 10-9 | 76 | 0 | 39 | 1 | 100.00% | 2.50% | 76 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.84e-18' χ2 p-value for Mo17 x B73: '1.87e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G403190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 427 | 3 | 211 | 3 | 99.30% | 1.40% | 430 | 214 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G403162 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.82872 x 10-2 | 59 | 32 | 59 | 36 | 64.84% | 37.89% | 91 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046494' χ2 p-value for Mo17 x B73: '.0182872' Biased in favor of strain: 'B73' |
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| GRMZM2G403162 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373812 x 10-1 | 56 | 25 | 37 | 32 | 69.14% | 46.38% | 81 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6373812' χ2 p-value for Mo17 x B73: '.0003499' Biased in favor of strain: '' |
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| GRMZM2G403151 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 41 | 50 | 34 | 34 | 45.05% | 50.00% | 91 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3454475' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G403151 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 5 | 6 | 37.50% | 54.55% | 8 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: '' |
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| GRMZM2G403003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.8063 x 10-3 | 535 | 417 | 471 | 395 | 56.20% | 45.61% | 952 | 866 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001311' χ2 p-value for Mo17 x B73: '.0098063' Biased in favor of strain: 'B73' |
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| GRMZM2G403003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.293205 x 10-1 | 260 | 127 | 142 | 240 | 67.18% | 62.83% | 387 | 382 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8293205' χ2 p-value for Mo17 x B73: '.111415' Biased in favor of strain: '' |
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| GRMZM2G402987 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 4 | 0 | 62.50% | 0.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G402987 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G402977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.22 x 10-9 | 0 | 33 | 0 | 52 | 0.00% | 100.00% | 33 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.22e-09' χ2 p-value for Mo17 x B73: '5.55e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G402977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-5 | 0 | 24 | 0 | 34 | 0.00% | 100.00% | 24 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.26e-12' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17' |
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| GRMZM2G402797 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G402797 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G402779 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 1 | 6 | 3 | 92.31% | 33.33% | 13 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022819' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G402779 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 5 | 2 | 0.00% | 28.57% | 1 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G402765 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G402765 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G402675 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.09 x 10-20 | 425 | 98 | 313 | 123 | 81.26% | 28.21% | 523 | 436 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.09e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G402675 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 910 | 120 | 327 | 205 | 88.35% | 38.53% | 1030 | 532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |