Displaying data sets 58701 - 58800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G11670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '113.062'
Avg. expression score in LCM sample: '43.4764'
Tissue used: 'pure endosperm, no chalazal'
AT4G11670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11660 AT-HSFB2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-9 283 29 90.71% 312 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11660 AT-HSFB2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.37316 x 10-1 185 80 82 212 69.81% 72.11% 265 294 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.0e-08'
Avg. expression score for this sample: '378.283'
Avg. expression score in LCM sample: '39.1699'
Tissue used: 'pure endosperm, no chalazal'
AT4G11660 AT-HSFB2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9378 x 10-2 79 13 85.87% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11660 AT-HSFB2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-5 172 21 89.12% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11660 AT-HSFB2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-9 207 53 64 308 79.62% 82.80% 260 372 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.0e-08'
Avg. expression score for this sample: '366.703'
Avg. expression score in LCM sample: '39.1699'
Tissue used: 'full endosperm'
AT4G11660 AT-HSFB2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.89841 x 10-1 107 108 43 56 49.77% 56.57% 215 99 TAIR8 Avg. embryo expression (dissected): '370.683'
Avg. embryo expression (LCM): '41.6694'
AT4G11655 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.366104'
Avg. embryo expression (LCM): '0'
AT4G11655 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11655 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.912624'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11655 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11655 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11655 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11653 RALFL29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11653 RALFL29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11653 RALFL29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11653 RALFL29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.33035'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11653 RALFL29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11653 RALFL29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11650 OSM34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11650 OSM34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.4638'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11650 OSM34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.11985'
Avg. embryo expression (LCM): '0'
AT4G11650 OSM34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 48 0 100.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11650 OSM34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.25121'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11650 OSM34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11640 SR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5672 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11640 SR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.908 x 10-2 55 10 84.62% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11640 SR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 13 11 37 48.00% 77.08% 25 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088649'
Avg. expression score for this sample: '17.652'
Avg. expression score in LCM sample: '4.17421'
Tissue used: 'pure endosperm, no chalazal'
AT4G11640 SR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.11081 x 10-1 64 59 8 9 52.03% 52.94% 123 17 TAIR8 Avg. embryo expression (dissected): '48.6584'
Avg. embryo expression (LCM): '21.3873'
AT4G11640 SR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.229 x 10-3 48 4 92.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11640 SR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8864 x 10-2 49 16 22 79 75.38% 78.22% 65 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088649'
Avg. expression score for this sample: '27.7675'
Avg. expression score in LCM sample: '4.17421'
Tissue used: 'full endosperm'
AT4G11630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.76748 x 10-1 61 6 30 22 91.04% 42.31% 67 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '49.6179'
Avg. expression score in LCM sample: '57.6158'
Tissue used: 'full endosperm'
AT4G11630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.38 x 10-4 85 9 24 2 90.43% 7.69% 94 26 TAIR8 Avg. embryo expression (dissected): '130.694'
Avg. embryo expression (LCM): '144.072'
AT4G11630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.55 x 10-4 11 23 32.35% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.29561 x 10-1 52 11 23 2 82.54% 8.00% 63 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '58.6361'
Avg. expression score in LCM sample: '57.6158'
Tissue used: 'pure endosperm, no chalazal'
AT4G11630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.25147 x 10-1 12 8 60.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3 x 10-16 169 5 97.13% 174 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.148174'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.410236'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.083884'
Avg. embryo expression (LCM): '0'
AT4G11600 GPX6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.5 x 10-6 171 51 37 22 77.03% 37.29% 222 59 TAIR8 Avg. embryo expression (dissected): '241.885'
Avg. embryo expression (LCM): '138.27'
AT4G11600 GPX6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2522 x 10-2 651 401 61.88% 1052 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11600 GPX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0237 x 10-2 1549 250 1047 836 86.10% 44.40% 1799 1883 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045452'
Avg. expression score for this sample: '1283.83'
Avg. expression score in LCM sample: '344.431'
Tissue used: 'full endosperm'
AT4G11600 GPX6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9 x 10-16 272 303 47.30% 575 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11600 GPX6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2731 95 96.64% 2826 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11600 GPX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.03722 x 10-1 779 147 431 289 84.13% 40.14% 926 720 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045452'
Avg. expression score for this sample: '921.828'
Avg. expression score in LCM sample: '344.431'
Tissue used: 'pure endosperm, no chalazal'
AT4G11590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.655083'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.56259'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.730063'
Avg. embryo expression (LCM): '0'
AT4G11590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.542784'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.290321'
Avg. embryo expression (LCM): '0'
AT4G11580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.111 x 10-3 177 142 55.49% 319 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.75 x 10-4 290 65 234 120 81.69% 33.90% 355 354 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05698'
Avg. expression score for this sample: '362.987'
Avg. expression score in LCM sample: '178.491'
Tissue used: 'pure endosperm, no chalazal'
AT4G11570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.17112 x 10-1 635 149 477 606 80.99% 55.96% 784 1083 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05698'
Avg. expression score for this sample: '657.409'
Avg. expression score in LCM sample: '178.491'
Tissue used: 'full endosperm'
AT4G11570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 847 70 92.37% 917 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7 x 10-4 201 94 36 31 68.14% 46.27% 295 67 TAIR8 Avg. embryo expression (dissected): '273.26'
Avg. embryo expression (LCM): '155.061'
AT4G11570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.86627 x 10-1 585 317 64.86% 902 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.628 x 10-3 577 293 66.32% 870 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5611 x 10-2 105 29 22 66 78.36% 75.00% 134 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003682'
Avg. expression score for this sample: '795.426'
Avg. expression score in LCM sample: '257.566'
Tissue used: 'pure endosperm, no chalazal'
AT4G11560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.14435 x 10-1 68 45 10 14 60.18% 58.33% 113 24 TAIR8 Avg. embryo expression (dissected): '656.687'
Avg. embryo expression (LCM): '464.605'
AT4G11560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.4456 x 10-2 169 61 99 244 73.48% 71.14% 230 343 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003682'
Avg. expression score for this sample: '872.698'
Avg. expression score in LCM sample: '257.566'
Tissue used: 'full endosperm'
AT4G11560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 57 21 73.08% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0724 x 10-2 415 115 78.30% 530 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.551 x 10-3 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.63967 x 10-1 12 1 13 0 92.31% 0.00% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.310829'
Avg. expression score for this sample: '4.32394'
Avg. expression score in LCM sample: '19.7834'
Tissue used: 'full endosperm'
AT4G11550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.36461 x 10-1 11 2 1 0 84.62% 0.00% 13 1 TAIR8 Avg. embryo expression (dissected): '5.32896'
Avg. embryo expression (LCM): '1.88379'
AT4G11550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9474 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.31218 x 10-1 29 0 18 1 100.00% 5.26% 29 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.310829'
Avg. expression score for this sample: '8.62128'
Avg. expression score in LCM sample: '19.7834'
Tissue used: 'pure endosperm, no chalazal'
AT4G11550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-18 179 0 100.00% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.36285 x 10-1 1 18 0 18 5.26% 100.00% 19 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791933'
Avg. expression score for this sample: '15.0989'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'pure endosperm, no chalazal'
AT4G11540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.04797 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.59097 x 10-1 1 22 1 70 4.35% 98.59% 23 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791933'
Avg. expression score for this sample: '27.8676'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'full endosperm'
AT4G11540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.54 x 10-4 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1938 x 10-2 0 24 0 5 0.00% 100.00% 24 5 TAIR8 Avg. embryo expression (dissected): '15.1575'
Avg. embryo expression (LCM): '3.18988'
AT4G11530 CRK34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35052 x 10-1 0 13 0 3 0.00% 100.00% 13 3 TAIR8 Avg. embryo expression (dissected): '3.61262'
Avg. embryo expression (LCM): '3.1522'
AT4G11530 CRK34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.03 x 10-4 5 2 0 41 71.43% 100.00% 7 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000221'
Avg. expression score for this sample: '6.86735'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11530 CRK34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.66679 x 10-1 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11530 CRK34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11530 CRK34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 2 0 1 5 100.00% 83.33% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000221'
Avg. expression score for this sample: '2.60892'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11530 CRK34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.61878 x 10-1 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11510 RALFL28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.46038 x 10-1 645 33 95.13% 678 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11510 RALFL28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.037 x 10-3 3 1 1 34 75.00% 97.14% 4 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001133'
Avg. expression score for this sample: '45.5341'
Avg. expression score in LCM sample: '5.71749'
Tissue used: 'pure endosperm, no chalazal'
AT4G11510 RALFL28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-12 227 251 47.49% 478 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11510 RALFL28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.02126 x 10-1 6 0 4 17 100.00% 80.95% 6 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001133'
Avg. expression score for this sample: '21.132'
Avg. expression score in LCM sample: '5.71749'
Tissue used: 'full endosperm'
AT4G11510 RALFL28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11510 RALFL28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'