Displaying data sets 58401 - 58500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G12110 SMO1-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.09509 x 10-1 24 12 0 3 66.67% 100.00% 36 3 TAIR8 Avg. embryo expression (dissected): '61.5104'
Avg. embryo expression (LCM): '52.2562'
AT4G12110 SMO1-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1924 x 10-2 25 4 86.21% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12110 SMO1-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.09511 x 10-1 6 6 50.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12110 SMO1-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.76741 x 10-1 16 11 59.26% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6488'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'full endosperm'
AT4G12100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.87249'
Avg. embryo expression (LCM): '0'
AT4G12100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6051'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'pure endosperm, no chalazal'
AT4G12100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G12090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.447842'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12080 AHL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 2.0 x 10-7 65 2 3 32 97.01% 91.43% 67 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '52.1387'
Avg. expression score in LCM sample: '13.184'
Tissue used: 'full endosperm'
AT4G12080 AHL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 6.55576 x 10-1 24 6 7 10 80.00% 58.82% 30 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '37.907'
Avg. expression score in LCM sample: '13.184'
Tissue used: 'pure endosperm, no chalazal'
AT4G12080 AHL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.15524 x 10-1 26 10 7 5 72.22% 41.67% 36 12 TAIR8 Avg. embryo expression (dissected): '62.7299'
Avg. embryo expression (LCM): '35.4026'
AT4G12080 AHL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0023 159 5 96.95% 164 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G12080 AHL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49994 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G12080 AHL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0824 x 10-1 52 2 96.30% 54 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G12070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.151 x 10-3 44 1 97.78% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5 x 10-5 47 0 100.00% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.151 x 10-3 35 9 9 60 79.55% 86.96% 44 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.04516'
Avg. expression score for this sample: '51.469'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'full endosperm'
AT4G12070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.37986 x 10-1 8 3 4 3 72.73% 42.86% 11 7 TAIR8 Avg. embryo expression (dissected): '15.9968'
Avg. embryo expression (LCM): '15.9996'
AT4G12070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.06419 x 10-1 9 3 10 5 75.00% 33.33% 12 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.04516'
Avg. expression score for this sample: '22.0299'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'pure endosperm, no chalazal'
AT4G12070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12065 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12065 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12065 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12065 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G12065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02068 x 10-1 43 8 43 19 84.31% 30.65% 51 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161194'
Avg. expression score for this sample: '38.404'
Avg. expression score in LCM sample: '22.914'
Tissue used: 'full endosperm'
AT4G12060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 3 11 14 84.21% 56.00% 19 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161194'
Avg. expression score for this sample: '17.1179'
Avg. expression score in LCM sample: '22.914'
Tissue used: 'pure endosperm, no chalazal'
AT4G12060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 44 28 17 3 61.11% 15.00% 72 20 TAIR8 Avg. embryo expression (dissected): '55.3528'
Avg. embryo expression (LCM): '48.9659'
AT4G12060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-9 71 4 94.67% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.83331 x 10-1 25 10 71.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.90642'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '35.6177'
Avg. embryo expression (LCM): '10.0217'
AT4G12050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.53983'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12040 SAP7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.06058 x 10-1 41 18 69.49% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12040 SAP7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.95307 x 10-1 127 30 80.89% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12040 SAP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.609 x 10-2 82 31 23 85 72.57% 78.70% 113 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '273.645'
Avg. expression score in LCM sample: '92.2735'
Tissue used: 'pure endosperm, no chalazal'
AT4G12040 SAP7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-9 198 13 93.84% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12040 SAP7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21838 x 10-1 42 48 14 7 46.67% 33.33% 90 21 TAIR8 Avg. embryo expression (dissected): '189.118'
Avg. embryo expression (LCM): '102.779'
AT4G12040 SAP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.03 x 10-4 166 61 65 263 73.13% 80.18% 227 328 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '398.483'
Avg. expression score in LCM sample: '92.2735'
Tissue used: 'full endosperm'
AT4G12030 BAT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.328065'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'full endosperm'
AT4G12030 BAT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.631'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'pure endosperm, no chalazal'
AT4G12030 BAT5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.263211'
Avg. embryo expression (LCM): '0'
AT4G12030 BAT5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12030 BAT5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12030 BAT5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12020 WRKY19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.56337 x 10-1 25 15 62.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12020 WRKY19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.41893 x 10-1 28 10 73.68% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12020 WRKY19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.93097 x 10-1 39 23 20 41 62.90% 67.21% 62 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.725661'
Avg. expression score for this sample: '67.0124'
Avg. expression score in LCM sample: '28.5874'
Tissue used: 'full endosperm'
AT4G12020 WRKY19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.35902 x 10-1 6 7 1 7 46.15% 87.50% 13 8 TAIR8 Avg. embryo expression (dissected): '56.9882'
Avg. embryo expression (LCM): '27.8172'
AT4G12020 WRKY19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.12312 x 10-1 8 7 8 15 53.33% 65.22% 15 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.725661'
Avg. expression score for this sample: '56.2199'
Avg. expression score in LCM sample: '28.5874'
Tissue used: 'pure endosperm, no chalazal'
AT4G12020 WRKY19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8337 x 10-2 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.58296 x 10-1 16 9 64.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.78345 x 10-1 193 68 73.95% 261 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.73375 x 10-1 51 15 19 33 77.27% 63.46% 66 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.451468'
Avg. expression score for this sample: '58.0428'
Avg. expression score in LCM sample: '20.6653'
Tissue used: 'pure endosperm, no chalazal'
AT4G12010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.63 x 10-4 105 20 84.00% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.51264 x 10-1 42 25 5 8 62.69% 61.54% 67 13 TAIR8 Avg. embryo expression (dissected): '54.466'
Avg. embryo expression (LCM): '35.6538'
AT4G12010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.38365 x 10-1 127 37 80 128 77.44% 61.54% 164 208 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.451468'
Avg. expression score for this sample: '76.5054'
Avg. expression score in LCM sample: '20.6653'
Tissue used: 'full endosperm'
AT4G12005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.87368 x 10-1 19 3 5 6 86.36% 54.55% 22 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.844598'
Avg. expression score for this sample: '20.1695'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'full endosperm'
AT4G12005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 8 10 77.78% 55.56% 9 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.844598'
Avg. expression score for this sample: '20.3128'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'pure endosperm, no chalazal'
AT4G12005 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26195 x 10-1 7 3 0 3 70.00% 100.00% 10 3 TAIR8 Avg. embryo expression (dissected): '15.3482'
Avg. embryo expression (LCM): '2.98894'
AT4G12005 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.267 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12005 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12005 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3631 x 10-1 8 7 53.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.03626 x 10-1 15 11 57.69% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.27 x 10-4 28 0 100.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.68813 x 10-1 9 6 4 6 60.00% 60.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.832142'
Avg. expression score for this sample: '38.1561'
Avg. expression score in LCM sample: '20.1802'
Tissue used: 'full endosperm'
AT4G12000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 0 1 42.86% 100.00% 7 1 TAIR8 Avg. embryo expression (dissected): '18.8849'
Avg. embryo expression (LCM): '12.7093'
AT4G12000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 5 8 72.73% 61.54% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.832142'
Avg. expression score for this sample: '31.5767'
Avg. expression score in LCM sample: '20.1802'
Tissue used: 'pure endosperm, no chalazal'
AT4G12000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9765 x 10-1 36 24 60.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.43017 x 10-1 8 3 0 7 72.73% 100.00% 11 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '47.2428'
Avg. expression score in LCM sample: '21.7235'
Tissue used: 'pure endosperm, no chalazal'
AT4G11990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0661 x 10-2 52 13 80.00% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 2 1 50.00% 33.33% 6 3 TAIR8 Avg. embryo expression (dissected): '43.5145'
Avg. embryo expression (LCM): '41.7573'
AT4G11990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.45503 x 10-1 5 1 14 12 83.33% 46.15% 6 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.998'
Avg. expression score in LCM sample: '21.7235'
Tissue used: 'full endosperm'
AT4G11985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G11985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G11985 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G11985 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11985 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11985 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11980 NUDX14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.404 x 10-3 39 7 84.78% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11980 NUDX14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.07 x 10-4 59 9 86.76% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G11980 NUDX14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.31899 x 10-1 116 49 52 93 70.30% 64.14% 165 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.338242'
Avg. expression score for this sample: '86.8013'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'full endosperm'
AT4G11980 NUDX14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.13441 x 10-1 81 50 14 13 61.83% 48.15% 131 27 TAIR8 Avg. embryo expression (dissected): '118.306'
Avg. embryo expression (LCM): '68.1805'
AT4G11980 NUDX14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0169 x 10-1 67 32 63 69 67.68% 52.27% 99 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.338242'
Avg. expression score for this sample: '101.051'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'pure endosperm, no chalazal'
AT4G11980 NUDX14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.77532 x 10-1 15 10 60.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'