Displaying data sets 58001 - 58100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G12760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.75188 x 10-1 10 4 11 28 71.43% 71.79% 14 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.550444'
Avg. expression score for this sample: '163.044'
Avg. expression score in LCM sample: '16.8585'
Tissue used: 'full endosperm'
AT4G12760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.76467 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44444 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.2523'
Avg. expression score in LCM sample: '6.70225'
Tissue used: 'pure endosperm, no chalazal'
AT4G12750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.63636 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '44.2152'
Avg. embryo expression (LCM): '44.4197'
AT4G12750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.8844'
Avg. expression score in LCM sample: '6.70225'
Tissue used: 'full endosperm'
AT4G12740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 3 66.67% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.76236'
Avg. expression score in LCM sample: '.778989'
Tissue used: 'full endosperm'
AT4G12740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 3 1 0 25.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '6.21998'
Avg. embryo expression (LCM): '11.3278'
AT4G12740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.87179 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.27273 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.46805'
Avg. expression score in LCM sample: '.778989'
Tissue used: 'pure endosperm, no chalazal'
AT4G12735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G12735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.349281'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12731 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12731 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12731 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G12731 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.40887'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12731 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12731 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.994111'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12730 FLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.46306 x 10-1 184 92 29 92 66.67% 76.03% 276 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.75202'
Avg. expression score for this sample: '132.681'
Avg. expression score in LCM sample: '114.203'
Tissue used: 'full endosperm'
AT4G12730 FLA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.08196 x 10-1 60 20 75.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12730 FLA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.25183 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12730 FLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.26823 x 10-1 178 100 44 98 64.03% 69.01% 278 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.75202'
Avg. expression score for this sample: '125.92'
Avg. expression score in LCM sample: '114.203'
Tissue used: 'pure endosperm, no chalazal'
AT4G12730 FLA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12730 FLA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09909 x 10-1 15 29 1 4 34.09% 80.00% 44 5 TAIR8 Avg. embryo expression (dissected): '21.8689'
Avg. embryo expression (LCM): '3.3657'
AT4G12720 NUDT7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.26421 x 10-1 36 32 3 9 52.94% 75.00% 68 12 TAIR8 Avg. embryo expression (dissected): '475.618'
Avg. embryo expression (LCM): '27.5535'
AT4G12720 NUDT7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1384 x 10-2 144 10 93.51% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12720 NUDT7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.16 x 10-3 87 3 96.67% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12720 NUDT7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.099 x 10-2 16 4 3 30 80.00% 90.91% 20 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-09'
Avg. expression score for this sample: '268.452'
Avg. expression score in LCM sample: '21.8117'
Tissue used: 'pure endosperm, no chalazal'
AT4G12720 NUDT7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-8 103 20 23 151 83.74% 86.78% 123 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-09'
Avg. expression score for this sample: '728.001'
Avg. expression score in LCM sample: '21.8117'
Tissue used: 'full endosperm'
AT4G12720 NUDT7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.47917 x 10-1 33 3 91.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.09107 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 9 8 18 59.09% 69.23% 22 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.359913'
Avg. expression score for this sample: '44.9765'
Avg. expression score in LCM sample: '48.7236'
Tissue used: 'pure endosperm, no chalazal'
AT4G12710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 48 17 73.85% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05249 x 10-1 21 20 5 10 51.22% 66.67% 41 15 TAIR8 Avg. embryo expression (dissected): '102.326'
Avg. embryo expression (LCM): '54.3786'
AT4G12710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.31018 x 10-1 45 9 83.33% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.24634 x 10-1 27 6 4 18 81.82% 81.82% 33 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.359913'
Avg. expression score for this sample: '26.457'
Avg. expression score in LCM sample: '48.7236'
Tissue used: 'full endosperm'
AT4G12700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.02268 x 10-1 4322 1505 2622 4086 74.17% 60.91% 5827 6708 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.565608'
Avg. expression score for this sample: '2796.25'
Avg. expression score in LCM sample: '909.625'
Tissue used: 'full endosperm'
AT4G12700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.196 x 10-3 321 215 59.89% 536 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1606 216 88.14% 1822 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0 x 10-9 1748 956 607 320 64.64% 34.52% 2704 927 TAIR8 Avg. embryo expression (dissected): '1886.32'
Avg. embryo expression (LCM): '1160.65'
AT4G12700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1028 x 10-2 1927 681 1141 1406 73.89% 55.20% 2608 2547 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.565608'
Avg. expression score for this sample: '1653.49'
Avg. expression score in LCM sample: '909.625'
Tissue used: 'pure endosperm, no chalazal'
AT4G12700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-12 686 203 77.17% 889 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '13.3978'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G12690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '24.8747'
Avg. embryo expression (LCM): '7.08304'
AT4G12690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 4 0 0 7 100.00% 100.00% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '53.8945'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G12690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.42308 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 3 10 0 3 23.08% 100.00% 13 3 TAIR8 Avg. embryo expression (dissected): '45.9538'
Avg. embryo expression (LCM): '31.0448'
AT4G12680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 8 65.22% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.72067 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.43017 x 10-1 6 3 0 9 66.67% 100.00% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.6063'
Avg. expression score in LCM sample: '11.5967'
Tissue used: 'pure endosperm, no chalazal'
AT4G12680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.34478 x 10-1 6 14 0 11 30.00% 100.00% 20 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '44.7541'
Avg. expression score in LCM sample: '11.5967'
Tissue used: 'full endosperm'
AT4G12670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1079.91'
Avg. expression score in LCM sample: '140.13'
Tissue used: 'full endosperm'
AT4G12670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '712.997'
Avg. expression score in LCM sample: '140.13'
Tissue used: 'pure endosperm, no chalazal'
AT4G12670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '804.515'
Avg. embryo expression (LCM): '316.551'
AT4G12670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1186.54'
Avg. embryo expression (LCM): '805.356'
AT4G12650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1132.21'
Avg. expression score in LCM sample: '1511.97'
Tissue used: 'pure endosperm, no chalazal'
AT4G12650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1138.87'
Avg. expression score in LCM sample: '1511.97'
Tissue used: 'full endosperm'
AT4G12650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.57 x 10-4 46 3 93.88% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.70604 x 10-1 52 17 23 52 75.36% 69.33% 69 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087167'
Avg. expression score for this sample: '80.6833'
Avg. expression score in LCM sample: '59.8793'
Tissue used: 'pure endosperm, no chalazal'
AT4G12640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-6 87 5 94.57% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 41 39 13 13 51.25% 50.00% 80 26 TAIR8 Avg. embryo expression (dissected): '105.861'
Avg. embryo expression (LCM): '70.9183'
AT4G12640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.31422 x 10-1 69 17 21 44 80.23% 67.69% 86 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087167'
Avg. expression score for this sample: '105.168'
Avg. expression score in LCM sample: '59.8793'
Tissue used: 'full endosperm'
AT4G12620 ORC1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '68.2975'
Avg. expression score in LCM sample: '80.6181'
Tissue used: 'full endosperm'
AT4G12620 ORC1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12620 ORC1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '183.01'
Avg. embryo expression (LCM): '297.224'
AT4G12620 ORC1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12620 ORC1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 5 61.54% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12620 ORC1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '98.0786'
Avg. expression score in LCM sample: '80.6181'
Tissue used: 'pure endosperm, no chalazal'
AT4G12617 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '7.67231'
Tissue used: 'pure endosperm, no chalazal'
AT4G12617 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12617 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.75802'
Avg. embryo expression (LCM): '0'
AT4G12617 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12617 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '7.67231'
Tissue used: 'full endosperm'
AT4G12617 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12610 RAP74 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12610 RAP74 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12610 RAP74 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1112.9'
Avg. expression score in LCM sample: '379.221'
Tissue used: 'pure endosperm, no chalazal'
AT4G12610 RAP74 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G12610 RAP74 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1278.69'
Avg. expression score in LCM sample: '379.221'
Tissue used: 'full endosperm'
AT4G12610 RAP74 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '819.634'
Avg. embryo expression (LCM): '466.25'
AT4G12600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.23597 x 10-1 29 18 2 2 61.70% 50.00% 47 4 TAIR8 Avg. embryo expression (dissected): '41.4577'
Avg. embryo expression (LCM): '252.176'
AT4G12600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 4 8 13 76.47% 61.90% 17 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.839669'
Avg. expression score for this sample: '17.7368'
Avg. expression score in LCM sample: '3.90965'
Tissue used: 'full endosperm'