| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G12910 | scpl20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.4 x 10-6 | 43 | 0 | 0 | 12 | 100.00% | 100.00% | 43 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '481.876' Avg. expression score in LCM sample: '124.286' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12910 | scpl20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 690 | 0 | 7 | 576 | 100.00% | 98.80% | 690 | 583 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2274.47' Avg. expression score in LCM sample: '124.286' Tissue used: 'full endosperm' |
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| AT4G12910 | scpl20 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '59.7297' Avg. embryo expression (LCM): '30.3415' |
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| AT4G12910 | scpl20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.05743 x 10-1 | 192 | 0 | 100.00% | 192 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12910 | scpl20 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5275 x 10-2 | 736 | 0 | 100.00% | 736 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12910 | scpl20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.57946 x 10-1 | 318 | 0 | 100.00% | 318 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12900 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.6561 x 10-2 | 71 | 0 | 100.00% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 2 | 0 | 2 | 71.43% | 100.00% | 7 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '5.65333' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '3.95133' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12900 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.89725' Avg. embryo expression (LCM): '5.23693' |
||||||
| AT4G12890 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.80134' Avg. embryo expression (LCM): '0' |
|||||
| AT4G12890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 73 | 0 | 100.00% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12890 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.17898 x 10-1 | 1142 | 15 | 98.70% | 1157 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.10526 x 10-1 | 7 | 0 | 0 | 3 | 100.00% | 100.00% | 7 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-10' Avg. expression score for this sample: '27.4385' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G12890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.4 x 10-9 | 45 | 0 | 0 | 33 | 100.00% | 100.00% | 45 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-10' Avg. expression score for this sample: '73.1085' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12880 | ENODL19 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.98387 x 10-1 | 17 | 12 | 1 | 3 | 58.62% | 75.00% | 29 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '119.459' Avg. expression score in LCM sample: '2.05771' Tissue used: 'full endosperm' |
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| AT4G12880 | ENODL19 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 2 | 0 | 1 | 75.00% | 100.00% | 8 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '54.7885' Avg. expression score in LCM sample: '2.05771' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G12880 | ENODL19 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.61714 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12880 | ENODL19 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '48.1695' Avg. embryo expression (LCM): '52.6204' |
|||
| AT4G12880 | ENODL19 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.43763 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12880 | ENODL19 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.6 x 10-9 | 84 | 0 | 100.00% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12870 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.1 x 10-13 | 1044 | 0 | 100.00% | 1044 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.10777 x 10-1 | 9 | 0 | 1 | 1 | 100.00% | 50.00% | 9 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.589585' Avg. expression score for this sample: '8.15581' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 4 | 3 | 11 | 55.56% | 78.57% | 9 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.589585' Avg. expression score for this sample: '19.7756' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.1167 x 10-2 | 53 | 14 | 14 | 6 | 79.10% | 30.00% | 67 | 20 | TAIR8 |
Avg. embryo expression (dissected): '68.8072' Avg. embryo expression (LCM): '85.8379' |
||||
| AT4G12870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.95 x 10-4 | 58 | 0 | 100.00% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12860 | UNE14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.7257 x 10-1 | 8 | 9 | 47.06% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12860 | UNE14 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.49917 x 10-1 | 6 | 2 | 1 | 1 | 75.00% | 50.00% | 8 | 2 | TAIR8 |
Avg. embryo expression (dissected): '22.7065' Avg. embryo expression (LCM): '5.4881' |
|||
| AT4G12860 | UNE14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12860 | UNE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.3 x 10-6 | 32 | 0 | 100.00% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G12860 | UNE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 15 | 5 | 3 | 5 | 75.00% | 62.50% | 20 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.524736' Avg. expression score for this sample: '30.6658' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12860 | UNE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0314 x 10-1 | 4 | 3 | 9 | 3 | 57.14% | 25.00% | 7 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.524736' Avg. expression score for this sample: '16.3698' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.48718 x 10-1 | 19 | 6 | 4 | 17 | 76.00% | 80.95% | 25 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.047885' Avg. expression score for this sample: '37.5941' Avg. expression score in LCM sample: '13.3604' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.09669 x 10-1 | 31 | 10 | 17 | 59 | 75.61% | 77.63% | 41 | 76 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.047885' Avg. expression score for this sample: '95.0639' Avg. expression score in LCM sample: '13.3604' Tissue used: 'full endosperm' |
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| AT4G12850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.03634 x 10-1 | 17 | 22 | 7 | 1 | 43.59% | 12.50% | 39 | 8 | TAIR8 |
Avg. embryo expression (dissected): '47.5213' Avg. embryo expression (LCM): '34.2472' |
||||
| AT4G12850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.054 x 10-3 | 51 | 34 | 60.00% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.7011 x 10-1 | 36 | 13 | 73.47% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.48905 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.07649 x 10-1 | 47 | 26 | 64.38% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12840 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.64417 x 10-1 | 10 | 3 | 76.92% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.73315 x 10-1 | 239 | 127 | 150 | 352 | 65.30% | 70.12% | 366 | 502 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.747937' Avg. expression score for this sample: '109.093' Avg. expression score in LCM sample: '15.5504' Tissue used: 'full endosperm' |
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| AT4G12840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.77574 x 10-1 | 61 | 31 | 42 | 71 | 66.30% | 62.83% | 92 | 113 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.747937' Avg. expression score for this sample: '37.4369' Avg. expression score in LCM sample: '15.5504' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.1806 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12840 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.89073 x 10-1 | 12 | 6 | 6 | 3 | 66.67% | 33.33% | 18 | 9 | TAIR8 |
Avg. embryo expression (dissected): '8.62542' Avg. embryo expression (LCM): '9.19288' |
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| AT4G12830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.57057 x 10-1 | 13 | 1 | 3 | 0 | 92.86% | 0.00% | 14 | 3 | TAIR8 |
Avg. embryo expression (dissected): '16.2947' Avg. embryo expression (LCM): '23.8111' |
||||
| AT4G12830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.31388 x 10-1 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 6 | 62.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.67912 x 10-1 | 6 | 8 | 42.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 11 | 8 | 6 | 16 | 57.89% | 72.73% | 19 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.272474' Avg. expression score for this sample: '12.7756' Avg. expression score in LCM sample: '3.98313' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.38954 x 10-1 | 68 | 40 | 62 | 95 | 62.96% | 60.51% | 108 | 157 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.272474' Avg. expression score for this sample: '34.0947' Avg. expression score in LCM sample: '3.98313' Tissue used: 'full endosperm' |
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| AT4G12825 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '27.2241' Avg. expression score in LCM sample: '41.8891' Tissue used: 'full endosperm' |
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| AT4G12825 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '19.0461' Avg. expression score in LCM sample: '41.8891' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12825 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 4 | 66.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12825 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.45786' Avg. embryo expression (LCM): '0' |
||||||
| AT4G12825 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12825 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.4 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.196311' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.136344' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G12820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 6 | 50.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 4 | 33.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT4G12810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G12810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G12810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12800 | PSAL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '776.142' Avg. expression score in LCM sample: '233.491' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12800 | PSAL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '749.552' Avg. expression score in LCM sample: '233.491' Tissue used: 'full endosperm' |
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| AT4G12800 | PSAL | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1468.89' Avg. embryo expression (LCM): '824.872' |
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| AT4G12800 | PSAL | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12800 | PSAL | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12800 | PSAL | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 39 | 20 | 66.10% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.13 x 10-4 | 144 | 34 | 80.90% | 178 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.46664 x 10-1 | 199 | 93 | 82 | 170 | 68.15% | 67.46% | 292 | 252 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1123.3' Avg. expression score in LCM sample: '170.746' Tissue used: 'full endosperm' |
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| AT4G12790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.40883 x 10-1 | 28 | 13 | 23 | 27 | 68.29% | 54.00% | 41 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '519.827' Avg. expression score in LCM sample: '170.746' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.0323 x 10-1 | 72 | 26 | 73.47% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12790 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.47407 x 10-1 | 24 | 18 | 7 | 5 | 57.14% | 41.67% | 42 | 12 | TAIR8 |
Avg. embryo expression (dissected): '554.576' Avg. embryo expression (LCM): '320.407' |
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| AT4G12780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.97047 x 10-1 | 183 | 306 | 74 | 170 | 37.42% | 69.67% | 489 | 244 | TAIR8 |
Avg. embryo expression (dissected): '239.334' Avg. embryo expression (LCM): '153.704' |
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| AT4G12780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-29 | 1070 | 154 | 87.42% | 1224 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 990 | 92 | 91.50% | 1082 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1211 x 10-2 | 193 | 47 | 80.42% | 240 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.59781 x 10-1 | 566 | 465 | 316 | 1057 | 54.90% | 76.98% | 1031 | 1373 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.4e-14' Avg. expression score for this sample: '410.672' Avg. expression score in LCM sample: '139.836' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.8 x 10-21 | 991 | 538 | 274 | 1697 | 64.81% | 86.10% | 1529 | 1971 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.4e-14' Avg. expression score for this sample: '361.817' Avg. expression score in LCM sample: '139.836' Tissue used: 'full endosperm' |
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| AT4G12770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.53951 x 10-1 | 55 | 18 | 25 | 52 | 75.34% | 67.53% | 73 | 77 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.544269' Avg. expression score for this sample: '303.72' Avg. expression score in LCM sample: '171.01' Tissue used: 'full endosperm' |
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| AT4G12770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 56 | 17 | 34 | 49 | 76.71% | 59.04% | 73 | 83 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.544269' Avg. expression score for this sample: '383.556' Avg. expression score in LCM sample: '171.01' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G12770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.34591 x 10-1 | 50 | 15 | 76.92% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.66066 x 10-1 | 34 | 15 | 10 | 8 | 69.39% | 44.44% | 49 | 18 | TAIR8 |
Avg. embryo expression (dissected): '179.657' Avg. embryo expression (LCM): '143.356' |
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| AT4G12770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.7043 x 10-2 | 12 | 14 | 46.15% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-7 | 80 | 5 | 94.12% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.30769 x 10-1 | 15 | 2 | 88.24% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.76467 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G12760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.75188 x 10-1 | 10 | 4 | 11 | 28 | 71.43% | 71.79% | 14 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.550444' Avg. expression score for this sample: '163.044' Avg. expression score in LCM sample: '16.8585' Tissue used: 'full endosperm' |
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| AT4G12760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.31857 x 10-1 | 5 | 10 | 0 | 2 | 33.33% | 100.00% | 15 | 2 | TAIR8 |
Avg. embryo expression (dissected): '123.889' Avg. embryo expression (LCM): '82.4973' |