| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G407825 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.82232 x 10-2 | 160 | 129 | 158 | 123 | 55.36% | 43.77% | 289 | 281 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0682232' χ2 p-value for Mo17 x B73: '.0368046' Biased in favor of strain: '' |
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| GRMZM2G407825 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1189 x 10-3 | 73 | 16 | 60 | 65 | 82.02% | 52.00% | 89 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021189' χ2 p-value for Mo17 x B73: '.0005042' Biased in favor of strain: 'B73' |
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| GRMZM2G407626 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 1 | 2 | 6 | 90.91% | 75.00% | 11 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0066556' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G407626 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G407406 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 7 | 0.00% | 100.00% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G407406 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G407396 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.04 x 10-10 | 42 | 1 | 65 | 1 | 97.67% | 1.52% | 43 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.04e-10' χ2 p-value for Mo17 x B73: '3.33e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G407396 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 1 | 0 | 87.50% | 0.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G407361 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.716076 x 10-1 | 147 | 122 | 96 | 104 | 54.65% | 52.00% | 269 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1274396' χ2 p-value for Mo17 x B73: '.5716076' Biased in favor of strain: '' |
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| GRMZM2G407361 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.29978 x 10-1 | 258 | 113 | 125 | 229 | 69.54% | 64.69% | 371 | 354 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2401269' χ2 p-value for Mo17 x B73: '.429978' Biased in favor of strain: '' |
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| GRMZM2G407347 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166645 x 10-1 | 18 | 6 | 17 | 9 | 75.00% | 34.62% | 24 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1166645' Biased in favor of strain: '' |
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| GRMZM2G407347 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43062 x 10-2 | 12 | 0 | 11 | 7 | 100.00% | 38.89% | 12 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G407287 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.355 x 10-4 | 1619 | 1409 | 1510 | 1206 | 53.47% | 44.40% | 3028 | 2716 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001355' χ2 p-value for Mo17 x B73: '5.44e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G407287 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35119 x 10-2 | 1490 | 870 | 1005 | 2208 | 63.14% | 68.72% | 2360 | 3213 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002736' χ2 p-value for Mo17 x B73: '.0135119' Biased in favor of strain: '' |
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| GRMZM2G407249 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2671 | 1358 | 2394 | 1435 | 66.29% | 37.48% | 4029 | 3829 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G407249 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4709 | 1572 | 2690 | 2976 | 74.97% | 52.52% | 6281 | 5666 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G407189 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 9 | 6 | 19 | 12 | 60.00% | 38.71% | 15 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.2086678' Biased in favor of strain: '' |
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| GRMZM2G407189 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.795002 x 10-1 | 16 | 5 | 4 | 12 | 76.19% | 75.00% | 21 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3545492' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: '' |
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| GRMZM2G407181 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G407181 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G407146 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.316 x 10-4 | 698 | 365 | 224 | 309 | 65.66% | 57.97% | 1063 | 533 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.72e-24' χ2 p-value for Mo17 x B73: '.0002316' Biased in favor of strain: '' |
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| GRMZM2G407146 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.020098 x 10-1 | 2538 | 1341 | 1435 | 3126 | 65.43% | 68.54% | 3879 | 4561 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1020098' χ2 p-value for Mo17 x B73: '.0073541' Biased in favor of strain: '' |
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| GRMZM2G407044 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.278 x 10-4 | 418 | 318 | 402 | 276 | 56.79% | 40.71% | 736 | 678 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002278' χ2 p-value for Mo17 x B73: '1.30e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G407044 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12246 x 10-2 | 285 | 107 | 135 | 161 | 72.70% | 54.39% | 392 | 296 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0112246' χ2 p-value for Mo17 x B73: '7.47e-06' Biased in favor of strain: '' |
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| GRMZM2G406977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G406977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G406830 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.202328 x 10-1 | 127 | 153 | 73 | 123 | 45.36% | 62.76% | 280 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1202328' χ2 p-value for Mo17 x B73: '.000355' Biased in favor of strain: '' |
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| GRMZM2G406830 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.925016 x 10-1 | 85 | 54 | 53 | 131 | 61.15% | 71.20% | 139 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1677379' χ2 p-value for Mo17 x B73: '.1925016' Biased in favor of strain: '' |
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| GRMZM2G406758 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.066 x 10-4 | 34 | 9 | 34 | 11 | 79.07% | 24.44% | 43 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001376' χ2 p-value for Mo17 x B73: '.0006066' Biased in favor of strain: 'B73' |
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| GRMZM2G406758 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G406746 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.04096 x 10-2 | 62 | 44 | 59 | 29 | 58.49% | 32.95% | 106 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0804096' χ2 p-value for Mo17 x B73: '.0013838' Biased in favor of strain: '' |
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| GRMZM2G406746 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.38312 x 10-2 | 59 | 18 | 36 | 36 | 76.62% | 50.00% | 77 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0638312' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G406715 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 40 | 0 | 100.00% | 0.00% | 6 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '2.54e-10' Biased in favor of strain: '' |
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| GRMZM2G406715 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 9 | 0 | 100.00% | 0.00% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM2G406674 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 7 | 0 | 100.00% | 0.00% | 7 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G406674 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 9 | 0 | 100.00% | 0.00% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM2G406643 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.752335 x 10-1 | 13 | 7 | 8 | 13 | 65.00% | 61.90% | 20 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.2752335' Biased in favor of strain: '' |
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| GRMZM2G406643 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.772785 x 10-1 | 16 | 9 | 11 | 44 | 64.00% | 80.00% | 25 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7772785' χ2 p-value for Mo17 x B73: '.035939' Biased in favor of strain: '' |
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| GRMZM2G406603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35 x 10-21 | 819 | 371 | 738 | 414 | 68.82% | 35.94% | 1190 | 1152 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.45e-38' χ2 p-value for Mo17 x B73: '1.35e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G406603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.73 x 10-6 | 685 | 246 | 517 | 539 | 73.58% | 51.04% | 931 | 1056 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.73e-06' χ2 p-value for Mo17 x B73: '4.72e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G406600 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 0 | 1 | 37.50% | 100.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G406600 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 0 | 5 | 2 | 100.00% | 28.57% | 17 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G406553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45561 x 10-2 | 256 | 198 | 242 | 195 | 56.39% | 44.62% | 454 | 437 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0064873' χ2 p-value for Mo17 x B73: '.0245561' Biased in favor of strain: 'B73' |
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| GRMZM2G406553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.27 x 10-10 | 104 | 117 | 196 | 94 | 47.06% | 32.41% | 221 | 290 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.27e-10' χ2 p-value for Mo17 x B73: '3.62e-35' Biased in favor of strain: '' |
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| GRMZM2G406552 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3786 | 1804 | 6652 | 13626 | 67.73% | 67.20% | 5590 | 20278 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G406552 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.61769 x 10-2 | 3071 | 1430 | 7714 | 12019 | 68.23% | 60.91% | 4501 | 19733 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0261769' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G406493 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.17 x 10-14 | 101 | 6 | 64 | 3 | 94.39% | 4.48% | 107 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.15e-20' χ2 p-value for Mo17 x B73: '9.17e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G406493 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.36 x 10-22 | 203 | 4 | 89 | 9 | 98.07% | 9.18% | 207 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.36e-22' χ2 p-value for Mo17 x B73: '1.50e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G406413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.542552 x 10-1 | 76 | 65 | 80 | 68 | 53.90% | 45.95% | 141 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3542552' χ2 p-value for Mo17 x B73: '.3239399' Biased in favor of strain: '' |
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| GRMZM2G406413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.671695 x 10-1 | 119 | 66 | 70 | 149 | 64.32% | 68.04% | 185 | 219 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4991013' χ2 p-value for Mo17 x B73: '.6671695' Biased in favor of strain: '' |
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| GRMZM2G406269 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.28 x 10-4 | 82 | 42 | 59 | 12 | 66.13% | 16.90% | 124 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000328' χ2 p-value for Mo17 x B73: '2.43e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G406269 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 2 | 0 | 77.78% | 0.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795075' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G406170 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G406170 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 5 | 100.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G406165 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.615938 x 10-1 | 147 | 172 | 79 | 106 | 46.08% | 57.30% | 319 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1615938' χ2 p-value for Mo17 x B73: '.0471356' Biased in favor of strain: '' |
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| GRMZM2G406165 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.155321 x 10-1 | 118 | 60 | 55 | 152 | 66.29% | 73.43% | 178 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9155321' χ2 p-value for Mo17 x B73: '.039' Biased in favor of strain: '' |
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| GRMZM2G406119 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.709 x 10-3 | 202 | 66 | 75 | 115 | 75.37% | 60.53% | 268 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.77e-17' χ2 p-value for Mo17 x B73: '.003709' Biased in favor of strain: '' |
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| GRMZM2G406119 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.713 x 10-4 | 1001 | 217 | 432 | 695 | 82.18% | 61.67% | 1218 | 1127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-30' χ2 p-value for Mo17 x B73: '.0003713' Biased in favor of strain: 'B73' |
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| GRMZM2G406108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22 x 10-6 | 132 | 37 | 148 | 78 | 78.11% | 34.51% | 169 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-13' χ2 p-value for Mo17 x B73: '3.22e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G406108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 22 | 0 | 2 | 1 | 100.00% | 33.33% | 22 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009112' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G406101 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.88671 x 10-2 | 38 | 22 | 50 | 28 | 63.33% | 35.90% | 60 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0388671' χ2 p-value for Mo17 x B73: '.0127381' Biased in favor of strain: 'B73' |
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| GRMZM2G406101 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.31 x 10-18 | 89 | 136 | 38 | 364 | 39.56% | 90.55% | 225 | 402 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.31e-18' χ2 p-value for Mo17 x B73: '3.08e-24' Biased in favor of strain: 'Mo17' |
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| GRMZM2G406099 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.22212 x 10-2 | 122 | 67 | 109 | 81 | 64.55% | 42.63% | 189 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000632' χ2 p-value for Mo17 x B73: '.0422212' Biased in favor of strain: 'B73' |
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| GRMZM2G406099 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.62702 x 10-2 | 111 | 41 | 75 | 99 | 73.03% | 56.90% | 152 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0962702' χ2 p-value for Mo17 x B73: '.0062591' Biased in favor of strain: '' |
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| GRMZM2G406089 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 15 | 1 | 100.00% | 6.25% | 8 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: '' |
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| GRMZM2G406089 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 0 | 25.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G406043 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.072284 x 10-1 | 44 | 17 | 20 | 27 | 72.13% | 57.45% | 61 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005462' χ2 p-value for Mo17 x B73: '.3072284' Biased in favor of strain: '' |
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| GRMZM2G406043 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.607565 x 10-1 | 20 | 18 | 21 | 44 | 52.63% | 67.69% | 38 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0664522' χ2 p-value for Mo17 x B73: '.8607565' Biased in favor of strain: '' |
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| GRMZM2G406024 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G406024 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434287 x 10-1 | 9 | 3 | 8 | 13 | 75.00% | 61.90% | 12 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5403009' χ2 p-value for Mo17 x B73: '.6434287' Biased in favor of strain: '' |
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| GRMZM2G406014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 20 | 3 | 62.50% | 13.04% | 8 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.000393' Biased in favor of strain: '' |
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| GRMZM2G406014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G405804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 8 | 0 | 100.00% | 0.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G405804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G405760 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.525593 x 10-1 | 87 | 64 | 49 | 61 | 57.62% | 55.45% | 151 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0612463' χ2 p-value for Mo17 x B73: '.2525593' Biased in favor of strain: '' |
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| GRMZM2G405760 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.99742 x 10-2 | 83 | 28 | 50 | 28 | 74.77% | 35.90% | 111 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0699742' χ2 p-value for Mo17 x B73: '8.18e-09' Biased in favor of strain: '' |
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| GRMZM2G405706 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 5 | 4 | 85.71% | 44.44% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G405706 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 1 | 4 | 100.00% | 80.00% | 6 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| GRMZM2G405699 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.87036 x 10-2 | 115 | 89 | 91 | 43 | 56.37% | 32.09% | 204 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0687036' χ2 p-value for Mo17 x B73: '.0000337' Biased in favor of strain: '' |
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| GRMZM2G405699 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.157631 x 10-1 | 94 | 54 | 60 | 89 | 63.51% | 59.73% | 148 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4157631' χ2 p-value for Mo17 x B73: '.0725291' Biased in favor of strain: '' |
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| GRMZM2G405690 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53473 x 10-2 | 85 | 36 | 50 | 30 | 70.25% | 37.50% | 121 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.41e-06' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: 'B73' |
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| GRMZM2G405690 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.95374 x 10-2 | 34 | 8 | 48 | 27 | 80.95% | 36.00% | 42 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0495374' χ2 p-value for Mo17 x B73: '1.76e-08' Biased in favor of strain: '' |
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| GRMZM2G405662 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.272594 x 10-1 | 4 | 21 | 10 | 11 | 16.00% | 52.38% | 25 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006739' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM2G405662 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.003509 x 10-1 | 13 | 2 | 12 | 7 | 86.67% | 36.84% | 15 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.0058198' Biased in favor of strain: '' |
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| GRMZM2G405581 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.4335 x 10-3 | 289 | 138 | 180 | 134 | 67.68% | 42.68% | 427 | 314 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-13' χ2 p-value for Mo17 x B73: '.0094335' Biased in favor of strain: 'B73' |
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| GRMZM2G405581 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15 x 10-19 | 403 | 63 | 227 | 147 | 86.48% | 39.30% | 466 | 374 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.15e-19' χ2 p-value for Mo17 x B73: '3.07e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G405575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.115 x 10-4 | 23 | 0 | 13 | 0 | 100.00% | 0.00% | 23 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-06' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'B73' |
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| GRMZM2G405575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6779 x 10-3 | 16 | 0 | 10 | 0 | 100.00% | 0.00% | 16 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G405559 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 6 | 1 | 75.00% | 14.29% | 8 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G405559 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G405503 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43059 x 10-2 | 37 | 8 | 18 | 6 | 82.22% | 25.00% | 45 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000154' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: 'B73' |
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| GRMZM2G405503 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.007 x 10-4 | 208 | 62 | 117 | 112 | 77.04% | 48.91% | 270 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003007' χ2 p-value for Mo17 x B73: '1.19e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G405499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.224607 x 10-1 | 128 | 136 | 84 | 117 | 48.48% | 58.21% | 264 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6224607' χ2 p-value for Mo17 x B73: '.0199312' Biased in favor of strain: '' |
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| GRMZM2G405499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.917506 x 10-1 | 88 | 64 | 60 | 137 | 57.89% | 69.54% | 152 | 197 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0217777' χ2 p-value for Mo17 x B73: '.3917506' Biased in favor of strain: '' |
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| GRMZM2G405474 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 63 | 44 | 62 | 62 | 58.88% | 50.00% | 107 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0662395' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G405474 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.829131 x 10-1 | 52 | 33 | 21 | 60 | 61.18% | 74.07% | 85 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2829131' χ2 p-value for Mo17 x B73: '.1572993' Biased in favor of strain: '' |
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| GRMZM2G405459 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 6 | 5 | 83.33% | 45.45% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G405459 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 3 | 100.00% | 75.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G405385 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.17 x 10-5 | 108 | 49 | 87 | 38 | 68.79% | 30.40% | 157 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.49e-06' χ2 p-value for Mo17 x B73: '.0000117' Biased in favor of strain: 'B73' |
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| GRMZM2G405385 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12 x 10-10 | 220 | 34 | 99 | 77 | 86.61% | 43.75% | 254 | 176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-11' χ2 p-value for Mo17 x B73: '1.12e-10' Biased in favor of strain: 'B73' |