Displaying data sets 5601 - 5700 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G59280 PUM16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.290902'
Avg. embryo expression (LCM): '0'
AT5G59280 PUM16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59280 PUM16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59280 PUM16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '.51155'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.34614 x 10-1 16 1 1 0 94.12% 0.00% 17 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '1.79789'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.289597'
Avg. embryo expression (LCM): '0'
AT5G59270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-5 0 8 0.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '.506747'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 10 1 0 2 90.91% 100.00% 11 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '2.2969'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6923 x 10-2 7 0 0 0 100.00% 7 0 TAIR8 Avg. embryo expression (dissected): '1.43439'
Avg. embryo expression (LCM): '0'
AT5G59260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-8 0 19 0.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.411'
Avg. expression score in LCM sample: '12.6843'
Tissue used: 'pure endosperm, no chalazal'
AT5G59250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.4032'
Avg. expression score in LCM sample: '12.6843'
Tissue used: 'full endosperm'
AT5G59250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.4772'
Avg. embryo expression (LCM): '43.3773'
AT5G59250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.3839'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'pure endosperm, no chalazal'
AT5G59240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.5396'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'full endosperm'
AT5G59240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.5516'
Avg. embryo expression (LCM): '51.5278'
AT5G59240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.59028'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'pure endosperm, no chalazal'
AT5G59230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.94849'
Avg. expression score in LCM sample: '5.27655'
Tissue used: 'full endosperm'
AT5G59230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.34604'
Avg. embryo expression (LCM): '2.26054'
AT5G59230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59220 HAI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.52258 x 10-1 2135 655 1347 2096 76.52% 60.88% 2790 3443 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-25'
Avg. expression score for this sample: '2378.78'
Avg. expression score in LCM sample: '333.143'
Tissue used: 'pure endosperm, no chalazal'
AT5G59220 HAI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3281 920 844 2369 78.10% 73.73% 4201 3213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-25'
Avg. expression score for this sample: '1742.94'
Avg. expression score in LCM sample: '333.143'
Tissue used: 'full endosperm'
AT5G59220 HAI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.791 x 10-3 767 538 376 316 58.77% 45.66% 1305 692 TAIR8 Avg. embryo expression (dissected): '1287.14'
Avg. embryo expression (LCM): '112.625'
AT5G59220 HAI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-10 634 134 82.55% 768 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59220 HAI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1116 42 96.37% 1158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59220 HAI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1890 41 97.88% 1931 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 3 10 66.67% 76.92% 3 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037498'
Avg. expression score for this sample: '147.622'
Avg. expression score in LCM sample: '51.7808'
Tissue used: 'pure endosperm, no chalazal'
AT5G59210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2896 x 10-2 35 11 13 56 76.09% 81.16% 46 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037498'
Avg. expression score for this sample: '144.965'
Avg. expression score in LCM sample: '51.7808'
Tissue used: 'full endosperm'
AT5G59210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 3 10 1 1 23.08% 50.00% 13 2 TAIR8 Avg. embryo expression (dissected): '119.419'
Avg. embryo expression (LCM): '93.3856'
AT5G59210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.85111 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.71374 x 10-1 101 35 74.26% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.04531 x 10-1 87 17 83.65% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59200 OTP80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.80129 x 10-1 8 3 9 4 72.73% 30.77% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.1304'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'pure endosperm, no chalazal'
AT5G59200 OTP80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25596 x 10-1 22 6 3 10 78.57% 76.92% 28 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.0116'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'full endosperm'
AT5G59200 OTP80 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.85917 x 10-1 31 20 5 7 60.78% 58.33% 51 12 TAIR8 Avg. embryo expression (dissected): '56.4112'
Avg. embryo expression (LCM): '41.8201'
AT5G59200 OTP80 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59200 OTP80 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.64507 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59200 OTP80 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5544 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.36792'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 2 1 0 5 66.67% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.3506'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 7 3 0 1 70.00% 100.00% 10 1 TAIR8 Avg. embryo expression (dissected): '8.45687'
Avg. embryo expression (LCM): '1.82099'
AT5G59190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.82128 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.83883 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59180 NRPB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 0 40.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.183012'
Avg. expression score for this sample: '15.7134'
Avg. expression score in LCM sample: '26.2799'
Tissue used: 'pure endosperm, no chalazal'
AT5G59180 NRPB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1592 x 10-2 9 9 3 44 50.00% 93.62% 18 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.183012'
Avg. expression score for this sample: '35.3461'
Avg. expression score in LCM sample: '26.2799'
Tissue used: 'full endosperm'
AT5G59180 NRPB7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 3 8 1 0 27.27% 0.00% 11 1 TAIR8 Avg. embryo expression (dissected): '27.2746'
Avg. embryo expression (LCM): '68.8587'
AT5G59180 NRPB7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.10699 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59180 NRPB7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7989 x 10-2 63 5 92.65% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59180 NRPB7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.05917 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.38678 x 10-1 541 318 360 770 62.98% 68.14% 859 1130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-08'
Avg. expression score for this sample: '14382.8'
Avg. expression score in LCM sample: '807.474'
Tissue used: 'pure endosperm, no chalazal'
AT5G59170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3 x 10-9 6639 4054 2693 5249 62.09% 66.09% 10693 7942 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-08'
Avg. expression score for this sample: '38961.4'
Avg. expression score in LCM sample: '807.474'
Tissue used: 'full endosperm'
AT5G59170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 5 5 6 54.55% 54.55% 11 11 TAIR8 Avg. embryo expression (dissected): '677.728'
Avg. embryo expression (LCM): '0'
AT5G59170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.66856 x 10-1 748 391 65.67% 1139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.73819 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0262 x 10-2 22 24 47.83% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59160 TOPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.32829 x 10-1 30 12 8 35 71.43% 81.40% 42 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-06'
Avg. expression score for this sample: '104.689'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'pure endosperm, no chalazal'
AT5G59160 TOPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2 x 10-6 166 41 52 209 80.19% 80.08% 207 261 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-06'
Avg. expression score for this sample: '225.478'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'full endosperm'
AT5G59160 TOPP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.69982 x 10-1 19 22 2 12 46.34% 85.71% 41 14 TAIR8 Avg. embryo expression (dissected): '99.353'
Avg. embryo expression (LCM): '94.3652'
AT5G59160 TOPP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.13969 x 10-1 48 7 87.27% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59160 TOPP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.37863 x 10-1 249 51 83.00% 300 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59160 TOPP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-8 333 27 92.50% 360 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59150 RABA2D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.34771 x 10-1 81 11 28 36 88.04% 56.25% 92 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000853'
Avg. expression score for this sample: '131.639'
Avg. expression score in LCM sample: '209.563'
Tissue used: 'pure endosperm, no chalazal'
AT5G59150 RABA2D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.951 x 10-3 82 14 31 96 85.42% 75.59% 96 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000853'
Avg. expression score for this sample: '138.37'
Avg. expression score in LCM sample: '209.563'
Tissue used: 'full endosperm'
AT5G59150 RABA2D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9764 x 10-1 17 17 7 12 50.00% 63.16% 34 19 TAIR8 Avg. embryo expression (dissected): '70.6215'
Avg. embryo expression (LCM): '88.9147'
AT5G59150 RABA2D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3571 x 10-2 82 10 89.13% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59150 RABA2D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7396 x 10-2 63 8 88.73% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59150 RABA2D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-8 150 6 96.15% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 1 66.67% 33.33% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525992'
Avg. expression score for this sample: '141.39'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'pure endosperm, no chalazal'
AT5G59140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.44578 x 10-1 17 1 9 17 94.44% 65.38% 18 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525992'
Avg. expression score for this sample: '310.634'
Avg. expression score in LCM sample: '140.747'
Tissue used: 'full endosperm'
AT5G59140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '111.149'
Avg. embryo expression (LCM): '147.865'
AT5G59140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.83667 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.50104 x 10-1 46 22 67.65% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.359 x 10-3 44 3 93.62% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.48593'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59120 SBT4.13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.1102 x 10-1 78 42 49 90 65.00% 64.75% 120 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.511952'
Avg. expression score for this sample: '95.255'
Avg. expression score in LCM sample: '773.669'
Tissue used: 'pure endosperm, no chalazal'
AT5G59120 SBT4.13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.54313 x 10-1 36 12 46 63 75.00% 57.80% 48 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.511952'
Avg. expression score for this sample: '50.0335'
Avg. expression score in LCM sample: '773.669'
Tissue used: 'full endosperm'
AT5G59120 SBT4.13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 6 1 2 2 85.71% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '7.73726'
Avg. embryo expression (LCM): '1.05492'
AT5G59120 SBT4.13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.27967 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59120 SBT4.13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0746 x 10-2 336 251 57.24% 587 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59120 SBT4.13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 141 79 64.09% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'