| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G14970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 1 | 1 | 3 | 0 | 50.00% | 0.00% | 2 | 3 | TAIR8 |
Avg. embryo expression (dissected): '16.672' Avg. embryo expression (LCM): '15.8992' |
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| AT4G14970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.05495 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.23221' Avg. expression score in LCM sample: '3.71857' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14965 | MAPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '99.6273' Avg. expression score in LCM sample: '29.9984' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14965 | MAPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14965 | MAPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14965 | MAPR4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '107.344' Avg. embryo expression (LCM): '82.9871' |
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| AT4G14965 | MAPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '103.119' Avg. expression score in LCM sample: '29.9984' Tissue used: 'full endosperm' |
||||||
| AT4G14965 | MAPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14960 | TUA6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.71307 x 10-1 | 303 | 122 | 71.29% | 425 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14960 | TUA6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.3313 x 10-2 | 107 | 58 | 25 | 14 | 64.85% | 35.90% | 165 | 39 | TAIR8 |
Avg. embryo expression (dissected): '3355.27' Avg. embryo expression (LCM): '3962.83' |
|||
| AT4G14960 | TUA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.7421 x 10-2 | 169 | 46 | 88 | 199 | 78.60% | 69.34% | 215 | 287 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.157427' Avg. expression score for this sample: '6754.21' Avg. expression score in LCM sample: '3504.2' Tissue used: 'full endosperm' |
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| AT4G14960 | TUA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-17 | 385 | 45 | 89.53% | 430 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14960 | TUA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.96981 x 10-1 | 225 | 99 | 82 | 129 | 69.44% | 61.14% | 324 | 211 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.157427' Avg. expression score for this sample: '5120.98' Avg. expression score in LCM sample: '3504.2' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14960 | TUA6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.04233 x 10-1 | 46 | 24 | 65.71% | 70 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14950 | KMS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.0609 x 10-1 | 16 | 3 | 84.21% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14950 | KMS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-6 | 118 | 6 | 95.16% | 124 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14950 | KMS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.88728 x 10-1 | 32 | 6 | 14 | 21 | 84.21% | 60.00% | 38 | 35 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288776' Avg. expression score for this sample: '86.6348' Avg. expression score in LCM sample: '67.3018' Tissue used: 'full endosperm' |
||||
| AT4G14950 | KMS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.35708 x 10-1 | 48 | 24 | 66.67% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14950 | KMS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.3728 x 10-1 | 28 | 4 | 12 | 19 | 87.50% | 61.29% | 32 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288776' Avg. expression score for this sample: '56.0896' Avg. expression score in LCM sample: '67.3018' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14950 | KMS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.32415 x 10-1 | 19 | 5 | 5 | 4 | 79.17% | 44.44% | 24 | 9 | TAIR8 |
Avg. embryo expression (dissected): '58.7095' Avg. embryo expression (LCM): '77.0971' |
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| AT4G14940 | AO1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.599312' Avg. embryo expression (LCM): '0' |
|||||
| AT4G14940 | AO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14940 | AO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.82043 x 10-1 | 6 | 1 | 0 | 3 | 85.71% | 100.00% | 7 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484078' Avg. expression score for this sample: '4.19279' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT4G14940 | AO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 3 | 0 | 0 | 72.73% | 11 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484078' Avg. expression score for this sample: '6.5' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G14940 | AO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.71969 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14940 | AO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1301 | 181 | 87.79% | 1482 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 4968 | 103 | 97.97% | 5071 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.4 x 10-9 | 3416 | 1613 | 1620 | 4246 | 67.93% | 72.38% | 5029 | 5866 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-22' Avg. expression score for this sample: '1413.15' Avg. expression score in LCM sample: '985.334' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2192 | 182 | 92.33% | 2374 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.972 x 10-3 | 517 | 471 | 139 | 229 | 52.33% | 62.23% | 988 | 368 | TAIR8 |
Avg. embryo expression (dissected): '291.234' Avg. embryo expression (LCM): '212.654' |
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| AT4G14930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.4 x 10-16 | 3052 | 1272 | 1114 | 3208 | 70.58% | 74.22% | 4324 | 4322 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-22' Avg. expression score for this sample: '765.588' Avg. expression score in LCM sample: '985.334' Tissue used: 'full endosperm' |
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| AT4G14920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 2 | 4 | 5 | 75.00% | 55.56% | 8 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.581504' Avg. expression score for this sample: '1505.45' Avg. expression score in LCM sample: '396.285' Tissue used: 'full endosperm' |
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| AT4G14920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 5 | 54.55% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.69921 x 10-1 | 4 | 2 | 4 | 1 | 66.67% | 20.00% | 6 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.581504' Avg. expression score for this sample: '1584.48' Avg. expression score in LCM sample: '396.285' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 1 | 1 | 60.00% | 50.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '1940.58' Avg. embryo expression (LCM): '616.011' |
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| AT4G14920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.17 x 10-4 | 26 | 0 | 100.00% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.76418 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14910 | HISN5B | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.4 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14910 | HISN5B | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14910 | HISN5B | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '24.6589' Avg. embryo expression (LCM): '29.5754' |
|||
| AT4G14910 | HISN5B | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14910 | HISN5B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.2455' Avg. expression score in LCM sample: '9.31848' Tissue used: 'full endosperm' |
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| AT4G14910 | HISN5B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.9908' Avg. expression score in LCM sample: '9.31848' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14905 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 2 | 2 | 2 | 60.00% | 50.00% | 5 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '172.76' Avg. expression score in LCM sample: '60.7612' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14905 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 5 | 68.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14905 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | TAIR8 |
Avg. embryo expression (dissected): '334.698' Avg. embryo expression (LCM): '191.556' |
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| AT4G14905 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 2 | 2 | 5 | 71.43% | 71.43% | 7 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '242.333' Avg. expression score in LCM sample: '60.7612' Tissue used: 'full endosperm' |
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| AT4G14905 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.69835 x 10-1 | 11 | 2 | 84.62% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14905 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G14900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G14900 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G14900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '963.36' Avg. expression score in LCM sample: '326.529' Tissue used: 'full endosperm' |
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| AT4G14900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G14900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1037.94' Avg. expression score in LCM sample: '326.529' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14900 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2173.83' Avg. embryo expression (LCM): '567.12' |
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| AT4G14890 | FdC1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1053.64' Avg. embryo expression (LCM): '513.206' |
|||||
| AT4G14890 | FdC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14890 | FdC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '242.943' Avg. expression score in LCM sample: '120.126' Tissue used: 'full endosperm' |
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| AT4G14890 | FdC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '552.719' Avg. expression score in LCM sample: '120.126' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14890 | FdC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14890 | FdC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14880 | OASA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.4871 x 10-1 | 0 | 7 | 0.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14880 | OASA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.89 x 10-4 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14880 | OASA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.115239' Avg. expression score for this sample: '196.267' Avg. expression score in LCM sample: '79.016' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14880 | OASA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.55418 x 10-1 | 0 | 6 | 0.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14880 | OASA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '180.81' Avg. embryo expression (LCM): '107.275' |
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| AT4G14880 | OASA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.0495 x 10-2 | 2 | 0 | 9 | 0 | 100.00% | 0.00% | 2 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.115239' Avg. expression score for this sample: '272.995' Avg. expression score in LCM sample: '79.016' Tissue used: 'full endosperm' |
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| AT4G14870 | SECE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '65.2641' Avg. expression score in LCM sample: '49.679' Tissue used: 'full endosperm' |
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| AT4G14870 | SECE1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14870 | SECE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '236.657' Avg. expression score in LCM sample: '49.679' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14870 | SECE1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '577.021' Avg. embryo expression (LCM): '237.018' |
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| AT4G14870 | SECE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14870 | SECE1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14860 | OFP11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14860 | OFP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14860 | OFP11 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '28.9752' Avg. embryo expression (LCM): '16.0373' |
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| AT4G14860 | OFP11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14860 | OFP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '29.3647' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G14860 | OFP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.3686' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14850 | LOI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.778716' Avg. expression score for this sample: '47.3249' Avg. expression score in LCM sample: '55.4699' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14850 | LOI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.7233 x 10-1 | 24 | 7 | 77.42% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14850 | LOI1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 5 | 0 | 0 | 54.55% | 11 | 0 | TAIR8 |
Avg. embryo expression (dissected): '80.492' Avg. embryo expression (LCM): '58.6737' |
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| AT4G14850 | LOI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.64484 x 10-1 | 5 | 5 | 2 | 14 | 50.00% | 87.50% | 10 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.778716' Avg. expression score for this sample: '68.1742' Avg. expression score in LCM sample: '55.4699' Tissue used: 'full endosperm' |
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| AT4G14850 | LOI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.4533 x 10-1 | 21 | 5 | 80.77% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14850 | LOI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.60117 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14840 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.03916 x 10-1 | 34 | 4 | 89.47% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.3776 x 10-2 | 16 | 8 | 3 | 35 | 66.67% | 92.11% | 24 | 38 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.161112' Avg. expression score for this sample: '80.1272' Avg. expression score in LCM sample: '18.5488' Tissue used: 'full endosperm' |
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| AT4G14840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.5926 x 10-1 | 43 | 9 | 82.69% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G14840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 4 | 3 | 7 | 60.00% | 70.00% | 10 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.161112' Avg. expression score for this sample: '35.0178' Avg. expression score in LCM sample: '18.5488' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14840 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 7 | 10 | 0 | 3 | 41.18% | 100.00% | 17 | 3 | TAIR8 |
Avg. embryo expression (dissected): '41.8151' Avg. embryo expression (LCM): '37.1985' |
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| AT4G14830 | HSP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 0 | 0 | 62.50% | 8 | 0 | TAIR8 |
Avg. embryo expression (dissected): '19.7125' Avg. embryo expression (LCM): '12.3074' |
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| AT4G14830 | HSP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.11618 x 10-1 | 15 | 2 | 88.24% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14830 | HSP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.32822 x 10-1 | 8 | 4 | 4 | 21 | 66.67% | 84.00% | 12 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.233022' Avg. expression score for this sample: '17.6764' Avg. expression score in LCM sample: '4.32119' Tissue used: 'full endosperm' |
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| AT4G14830 | HSP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.23077 x 10-1 | 2 | 1 | 0 | 5 | 66.67% | 100.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.233022' Avg. expression score for this sample: '12.3941' Avg. expression score in LCM sample: '4.32119' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G14830 | HSP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 4 | 77.78% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G14830 | HSP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.375 x 10-3 | 0 | 4 | 0.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |