Displaying data sets 56201 - 56300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G15093 LigB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15093 LigB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.1823'
Avg. embryo expression (LCM): '4.59644'
AT4G15090 FAR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.59556 x 10-1 106 120 31 30 46.90% 49.18% 226 61 TAIR8 Avg. embryo expression (dissected): '168.062'
Avg. embryo expression (LCM): '116.92'
AT4G15090 FAR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-22 352 27 92.88% 379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15090 FAR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-7 265 50 84.13% 315 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15090 FAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68299 x 10-1 123 72 70 146 63.08% 67.59% 195 216 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.167909'
Avg. expression score for this sample: '139.913'
Avg. expression score in LCM sample: '69.8592'
Tissue used: 'pure endosperm, no chalazal'
AT4G15090 FAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8567 x 10-2 141 72 74 252 66.20% 77.30% 213 326 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.167909'
Avg. expression score for this sample: '164.853'
Avg. expression score in LCM sample: '69.8592'
Tissue used: 'full endosperm'
AT4G15090 FAR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.6065 x 10-1 29 11 72.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.16107 x 10-1 25 6 80.65% 31 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G15080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 3.08 x 10-4 53 4 13 56 92.98% 81.16% 57 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000061'
Avg. expression score for this sample: '43.2374'
Avg. expression score in LCM sample: '13.2575'
Tissue used: 'full endosperm'
AT4G15080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2001 x 10-2 95 32 74.80% 127 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G15080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-4 180 5 97.30% 185 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G15080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.71873 x 10-1 23 46 8 11 33.33% 57.89% 69 19 TAIR8 Avg. embryo expression (dissected): '90.3175'
Avg. embryo expression (LCM): '101.059'
AT4G15080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 1.47699 x 10-1 13 2 3 14 86.67% 82.35% 15 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000061'
Avg. expression score for this sample: '24.3085'
Avg. expression score in LCM sample: '13.2575'
Tissue used: 'pure endosperm, no chalazal'
AT4G15075 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.482415'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15075 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 3 100.00% 60.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.84174'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15075 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.375 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15075 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15075 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15075 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '6.67416'
Avg. embryo expression (LCM): '2.82568'
AT4G15070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.987'
Avg. expression score in LCM sample: '1.64617'
Tissue used: 'pure endosperm, no chalazal'
AT4G15070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.01247'
Avg. expression score in LCM sample: '1.64617'
Tissue used: 'full endosperm'
AT4G15061 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15061 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15061 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15061 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15061 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15061 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15056 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15056 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15056 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 48 0 100.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15056 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15056 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15056 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15053 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.738673'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15053 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 36 6 85.71% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15053 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 6 53.85% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15053 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.293967'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.628747'
Avg. embryo expression (LCM): '0'
AT4G15050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 719 153 82.45% 872 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1977 158 92.60% 2135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.53749 x 10-1 840 239 77.85% 1079 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.73225 x 10-1 747 248 75.08% 995 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 1 0 57.14% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '17.4604'
Avg. embryo expression (LCM): '3.05173'
AT4G15040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.01253'
Avg. expression score in LCM sample: '2.1459'
Tissue used: 'pure endosperm, no chalazal'
AT4G15040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 2 1 1 80.00% 50.00% 10 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.3762'
Avg. expression score in LCM sample: '2.1459'
Tissue used: 'full endosperm'
AT4G15030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3233 x 10-2 74 18 28 72 80.43% 72.00% 92 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300474'
Avg. expression score for this sample: '338.348'
Avg. expression score in LCM sample: '10.4208'
Tissue used: 'full endosperm'
AT4G15030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.2016 12 23 6 4 34.29% 40.00% 35 10 TAIR8 Avg. embryo expression (dissected): '127.908'
Avg. embryo expression (LCM): '153.805'
AT4G15030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.236 x 10-3 91 17 84.26% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3038 x 10-2 71 14 83.53% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.87517 x 10-1 14 13 17 27 51.85% 61.36% 27 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300474'
Avg. expression score for this sample: '125.856'
Avg. expression score in LCM sample: '10.4208'
Tissue used: 'pure endosperm, no chalazal'
AT4G15020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 8 50.00% 88.89% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352271'
Avg. expression score for this sample: '138.469'
Avg. expression score in LCM sample: '115.584'
Tissue used: 'pure endosperm, no chalazal'
AT4G15020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.07779 x 10-1 5 20 3 59 20.00% 95.16% 25 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352271'
Avg. expression score for this sample: '246.143'
Avg. expression score in LCM sample: '115.584'
Tissue used: 'full endosperm'
AT4G15020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.047 x 10-3 111 12 90.24% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-6 41 58 41.41% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 10 3 7 37.50% 70.00% 16 10 TAIR8 Avg. embryo expression (dissected): '291.324'
Avg. embryo expression (LCM): '245.106'
AT4G15010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.77333 x 10-1 36 29 6 17 55.38% 73.91% 65 23 TAIR8 Avg. embryo expression (dissected): '70.7725'
Avg. embryo expression (LCM): '85.6997'
AT4G15010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6758 x 10-2 122 31 79.74% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.30974 x 10-1 100 31 76.34% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3114 x 10-1 24 16 4 36 60.00% 90.00% 40 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.448341'
Avg. expression score for this sample: '51.2308'
Avg. expression score in LCM sample: '56.2489'
Tissue used: 'pure endosperm, no chalazal'
AT4G15010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.09876 x 10-1 66 29 28 54 69.47% 65.85% 95 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.448341'
Avg. expression score for this sample: '88.5054'
Avg. expression score in LCM sample: '56.2489'
Tissue used: 'full endosperm'
AT4G15010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5461 x 10-1 1082 545 66.50% 1627 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.39454 x 10-1 1717 872 1106 2473 66.32% 69.10% 2589 3579 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.901195'
Avg. expression score for this sample: '8590.57'
Avg. expression score in LCM sample: '9591.73'
Tissue used: 'full endosperm'
AT4G15000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-5 3057 1294 70.26% 4351 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-24 3007 983 75.36% 3990 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.43144 x 10-1 2228 2005 1125 1070 52.63% 48.75% 4233 2195 TAIR8 Avg. embryo expression (dissected): '30304.6'
Avg. embryo expression (LCM): '58707.5'
AT4G15000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3209 x 10-2 1212 648 495 812 65.16% 62.13% 1860 1307 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.901195'
Avg. expression score for this sample: '9137.18'
Avg. expression score in LCM sample: '9591.73'
Tissue used: 'pure endosperm, no chalazal'
AT4G14990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.78289 x 10-1 261 253 121 584 50.78% 82.84% 514 705 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-12'
Avg. expression score for this sample: '238.06'
Avg. expression score in LCM sample: '16.4911'
Tissue used: 'pure endosperm, no chalazal'
AT4G14990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2 x 10-15 519 243 147 891 68.11% 85.84% 762 1038 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-12'
Avg. expression score for this sample: '239.921'
Avg. expression score in LCM sample: '16.4911'
Tissue used: 'full endosperm'
AT4G14990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-13 413 49 89.39% 462 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.8 x 10-7 424 819 111 222 34.11% 66.67% 1243 333 TAIR8 Avg. embryo expression (dissected): '463.264'
Avg. embryo expression (LCM): '154.169'
AT4G14990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-20 476 44 91.54% 520 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7 x 10-23 566 53 91.44% 619 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7261 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.90793 x 10-1 14 2 3 1 87.50% 25.00% 16 4 TAIR8 Avg. embryo expression (dissected): '18.4585'
Avg. embryo expression (LCM): '12.119'
AT4G14980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '.873148'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'pure endosperm, no chalazal'
AT4G14980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.61538 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G14980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.36591 x 10-1 19 5 12 0 79.17% 0.00% 24 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '17.0655'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'full endosperm'
AT4G14970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 7 50.00% 87.50% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.53341'
Avg. expression score in LCM sample: '3.71857'
Tissue used: 'full endosperm'
AT4G14970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.05495 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'