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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G15940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4 x 10-6 93 11 89.42% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.27719 x 10-1 134 60 62 152 69.07% 71.03% 194 214 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.291014'
Avg. expression score for this sample: '122.365'
Avg. expression score in LCM sample: '215.545'
Tissue used: 'full endosperm'
AT4G15930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.29809 x 10-1 79 38 49 120 67.52% 71.01% 117 169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.387877'
Avg. expression score for this sample: '334.003'
Avg. expression score in LCM sample: '72.5783'
Tissue used: 'full endosperm'
AT4G15930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.15531 x 10-1 29 18 61.70% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 25 23 6 5 52.08% 45.45% 48 11 TAIR8 Avg. embryo expression (dissected): '205.202'
Avg. embryo expression (LCM): '144.712'
AT4G15930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-10 81 1 98.78% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.45176 x 10-1 29 18 8 33 61.70% 80.49% 47 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.387877'
Avg. expression score for this sample: '236.616'
Avg. expression score in LCM sample: '72.5783'
Tissue used: 'pure endosperm, no chalazal'
AT4G15930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.226 x 10-3 35 3 92.11% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15920 SWEET17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15920 SWEET17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.771559'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'pure endosperm, no chalazal'
AT4G15920 SWEET17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.58239'
Avg. embryo expression (LCM): '1.25586'
AT4G15920 SWEET17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15920 SWEET17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.72589'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'full endosperm'
AT4G15920 SWEET17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15910 DI21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.21898 x 10-1 69 33 67.65% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15910 DI21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8938 x 10-2 157 93 93 125 62.80% 57.34% 250 218 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181394'
Avg. expression score for this sample: '856.922'
Avg. expression score in LCM sample: '56.1019'
Tissue used: 'pure endosperm, no chalazal'
AT4G15910 DI21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.14991 x 10-1 84 53 61.31% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15910 DI21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.46988 x 10-1 452 203 123 185 69.01% 60.06% 655 308 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.181394'
Avg. expression score for this sample: '1166.82'
Avg. expression score in LCM sample: '56.1019'
Tissue used: 'full endosperm'
AT4G15910 DI21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.72 x 10-4 298 242 55.19% 540 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15910 DI21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.837 x 10-3 502 342 67 31 59.48% 31.63% 844 98 TAIR8 Avg. embryo expression (dissected): '2299.23'
Avg. embryo expression (LCM): '3264.28'
AT4G15900 PRL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37264 x 10-1 34 28 9 10 54.84% 52.63% 62 19 TAIR8 Avg. embryo expression (dissected): '216.061'
Avg. embryo expression (LCM): '187.575'
AT4G15900 PRL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2009 x 10-2 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15900 PRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.78887 x 10-1 24 22 20 42 52.17% 67.74% 46 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191417'
Avg. expression score for this sample: '93.1585'
Avg. expression score in LCM sample: '25.7214'
Tissue used: 'full endosperm'
AT4G15900 PRL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-6 41 2 95.35% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15900 PRL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22414 x 10-1 35 13 72.92% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15900 PRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.71684 x 10-1 9 14 5 14 39.13% 73.68% 23 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191417'
Avg. expression score for this sample: '81.2787'
Avg. expression score in LCM sample: '25.7214'
Tissue used: 'pure endosperm, no chalazal'
AT4G15890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3664 x 10-1 67 26 42 28 72.04% 40.00% 93 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000777'
Avg. expression score for this sample: '17.6955'
Avg. expression score in LCM sample: '22.5466'
Tissue used: 'pure endosperm, no chalazal'
AT4G15890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3289 x 10-1 109 115 48.66% 224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.439 x 10-3 54 15 82 45 78.26% 35.43% 69 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000777'
Avg. expression score for this sample: '11.8948'
Avg. expression score in LCM sample: '22.5466'
Tissue used: 'full endosperm'
AT4G15890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5965 x 10-2 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4507 x 10-2 141 67 37 21 67.79% 36.21% 208 58 TAIR8 Avg. embryo expression (dissected): '47.9254'
Avg. embryo expression (LCM): '46.9565'
AT4G15890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-15 223 43 83.83% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15885 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15885 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15885 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G15885 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15880 ESD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-5 85 21 44 199 80.19% 81.89% 106 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-06'
Avg. expression score for this sample: '197.871'
Avg. expression score in LCM sample: '88.7754'
Tissue used: 'full endosperm'
AT4G15880 ESD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.25346 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15880 ESD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 23 31 5 8 42.59% 61.54% 54 13 TAIR8 Avg. embryo expression (dissected): '111.308'
Avg. embryo expression (LCM): '191.945'
AT4G15880 ESD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.78154 x 10-1 181 51 78.02% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15880 ESD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.13866 x 10-1 22 10 8 39 68.75% 82.98% 32 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-06'
Avg. expression score for this sample: '67.2768'
Avg. expression score in LCM sample: '88.7754'
Tissue used: 'pure endosperm, no chalazal'
AT4G15880 ESD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8247 x 10-1 144 39 78.69% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15870 TS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.28 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15870 TS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.658483'
Avg. expression score for this sample: '7.84051'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G15870 TS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.40985'
Avg. embryo expression (LCM): '0'
AT4G15870 TS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.15786 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15870 TS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.55576 x 10-1 20 0 13 14 100.00% 51.85% 20 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.658483'
Avg. expression score for this sample: '43.7407'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G15870 TS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15850 RH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8202 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15850 RH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.23743'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'pure endosperm, no chalazal'
AT4G15850 RH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0245 x 10-1 11 12 47.83% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15850 RH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 0 5 4 100.00% 44.44% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.1383'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'full endosperm'
AT4G15850 RH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15850 RH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 1 1 37.50% 50.00% 8 2 TAIR8 Avg. embryo expression (dissected): '21.8156'
Avg. embryo expression (LCM): '30.4294'
AT4G15840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.72371 x 10-1 43 26 8 9 62.32% 52.94% 69 17 TAIR8 Avg. embryo expression (dissected): '70.0351'
Avg. embryo expression (LCM): '42.1968'
AT4G15840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.0482 x 10-2 30 7 81.08% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.79635 x 10-1 141 55 59 118 71.94% 66.67% 196 177 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.896111'
Avg. expression score for this sample: '102.084'
Avg. expression score in LCM sample: '88.5696'
Tissue used: 'full endosperm'
AT4G15840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.56527 x 10-1 49 25 39 40 66.22% 50.63% 74 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.896111'
Avg. expression score for this sample: '98.0884'
Avg. expression score in LCM sample: '88.5696'
Tissue used: 'pure endosperm, no chalazal'
AT4G15840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-12 196 22 89.91% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.15586 x 10-1 143 58 71.14% 201 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.10421 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.89085 x 10-1 24 16 10 17 60.00% 62.96% 40 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.554618'
Avg. expression score for this sample: '49.6518'
Avg. expression score in LCM sample: '100.548'
Tissue used: 'pure endosperm, no chalazal'
AT4G15830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.94689 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9296 x 10-2 48 93 13 23 34.04% 63.89% 141 36 TAIR8 Avg. embryo expression (dissected): '193.63'
Avg. embryo expression (LCM): '193.302'
AT4G15830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 10 2 10 52.38% 83.33% 21 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.554618'
Avg. expression score for this sample: '22.1064'
Avg. expression score in LCM sample: '100.548'
Tissue used: 'full endosperm'
AT4G15830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.83 x 10-4 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.941 x 10-3 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.53677 x 10-1 10 2 15 16 83.33% 51.61% 12 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.843829'
Avg. expression score for this sample: '210.789'
Avg. expression score in LCM sample: '39.9783'
Tissue used: 'full endosperm'
AT4G15820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.85965 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 1 5 57.14% 83.33% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.843829'
Avg. expression score for this sample: '135.691'
Avg. expression score in LCM sample: '39.9783'
Tissue used: 'pure endosperm, no chalazal'
AT4G15820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 14 7 3 1 66.67% 25.00% 21 4 TAIR8 Avg. embryo expression (dissected): '297.48'
Avg. embryo expression (LCM): '278.172'
AT4G15810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '87.3224'
Avg. embryo expression (LCM): '74.2086'
AT4G15810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.9969'
Avg. expression score in LCM sample: '16.3882'
Tissue used: 'full endosperm'
AT4G15810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.4337'
Avg. expression score in LCM sample: '16.3882'
Tissue used: 'pure endosperm, no chalazal'
AT4G15810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15802 HSBP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15802 HSBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.89124'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'pure endosperm, no chalazal'
AT4G15802 HSBP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15802 HSBP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.71'
Avg. embryo expression (LCM): '64.953'
AT4G15802 HSBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.276'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'full endosperm'
AT4G15802 HSBP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15800 RALFL33 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2933 x 10-2 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15800 RALFL33 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.527 x 10-3 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15800 RALFL33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.61165 x 10-1 7 23 3 39 23.33% 92.86% 30 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.4156'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'full endosperm'
AT4G15800 RALFL33 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.11291 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15800 RALFL33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 13 3 25 43.48% 89.29% 23 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.9551'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'pure endosperm, no chalazal'
AT4G15800 RALFL33 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.836 x 10-3 7 46 4 11 13.21% 73.33% 53 15 TAIR8 Avg. embryo expression (dissected): '57.9344'
Avg. embryo expression (LCM): '18.3732'
AT4G15790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '130.104'
Avg. embryo expression (LCM): '173.698'
AT4G15790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '100.474'
Avg. expression score in LCM sample: '8.12795'
Tissue used: 'full endosperm'
AT4G15790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.0605'
Avg. expression score in LCM sample: '8.12795'
Tissue used: 'pure endosperm, no chalazal'
AT4G15790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15780 VAMP724 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2947 x 10-2 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G15780 VAMP724 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.53614 x 10-1 14 3 3 5 82.35% 62.50% 17 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.243351'
Avg. expression score for this sample: '301.253'
Avg. expression score in LCM sample: '118.157'
Tissue used: 'pure endosperm, no chalazal'