Displaying data sets 55201 - 55300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G16430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.29 x 10-4 68 52 56.67% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.8872 x 10-2 133 65 51 37 67.17% 42.05% 198 88 TAIR8 Avg. embryo expression (dissected): '281.893'
Avg. embryo expression (LCM): '232.773'
AT4G16430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9753 x 10-2 296 60 131 195 83.15% 59.82% 356 326 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000475'
Avg. expression score for this sample: '384.429'
Avg. expression score in LCM sample: '440.379'
Tissue used: 'full endosperm'
AT4G16430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.205 x 10-3 464 101 193 302 82.12% 61.01% 565 495 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000475'
Avg. expression score for this sample: '566.851'
Avg. expression score in LCM sample: '440.379'
Tissue used: 'pure endosperm, no chalazal'
AT4G16430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.20558 x 10-1 177 71 71.37% 248 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8 x 10-14 411 56 88.01% 467 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16420 ADA2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16420 ADA2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16420 ADA2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '115.636'
Avg. embryo expression (LCM): '100.619'
AT4G16420 ADA2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16420 ADA2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '133.191'
Avg. expression score in LCM sample: '75.4885'
Tissue used: 'pure endosperm, no chalazal'
AT4G16420 ADA2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '242.789'
Avg. expression score in LCM sample: '75.4885'
Tissue used: 'full endosperm'
AT4G16410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '441.13'
Avg. expression score in LCM sample: '71.9904'
Tissue used: 'full endosperm'
AT4G16410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '311.2'
Avg. expression score in LCM sample: '71.9904'
Tissue used: 'pure endosperm, no chalazal'
AT4G16410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '920.961'
Avg. embryo expression (LCM): '527.975'
AT4G16400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '855.349'
Avg. embryo expression (LCM): '474.061'
AT4G16400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '298.088'
Avg. expression score in LCM sample: '51.1047'
Tissue used: 'pure endosperm, no chalazal'
AT4G16400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '341.784'
Avg. expression score in LCM sample: '51.1047'
Tissue used: 'full endosperm'
AT4G16400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16390 SVR7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-14 45 0 100.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16390 SVR7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-20 0 92 0.00% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16390 SVR7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2 x 10-6 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16390 SVR7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.0 x 10-13 0 282 0 89 0.00% 100.00% 282 89 TAIR8 Avg. embryo expression (dissected): '417.817'
Avg. embryo expression (LCM): '618.723'
AT4G16390 SVR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4077 x 10-2 0 62 0 76 0.00% 100.00% 62 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-06'
Avg. expression score for this sample: '111.323'
Avg. expression score in LCM sample: '120.376'
Tissue used: 'full endosperm'
AT4G16390 SVR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7 x 10-6 0 82 0 46 0.00% 100.00% 82 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-06'
Avg. expression score for this sample: '102.874'
Avg. expression score in LCM sample: '120.376'
Tissue used: 'pure endosperm, no chalazal'
AT4G16380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 745 304 72 1067 71.02% 93.68% 1049 1139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '455.959'
Avg. expression score in LCM sample: '31.7181'
Tissue used: 'pure endosperm, no chalazal'
AT4G16380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3572 1152 362 4500 75.61% 92.55% 4724 4862 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1312.74'
Avg. expression score in LCM sample: '31.7181'
Tissue used: 'full endosperm'
AT4G16380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 9922 457 95.60% 10379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 14298 24 99.83% 14322 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.91089 x 10-1 234 385 91 250 37.80% 73.31% 619 341 TAIR8 Avg. embryo expression (dissected): '322.574'
Avg. embryo expression (LCM): '105.027'
AT4G16380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2 x 10-23 1262 90 93.34% 1352 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16370 OPT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.63609 x 10-1 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16370 OPT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6612 x 10-2 112 71 57 77 61.20% 57.46% 183 134 TAIR8 Avg. embryo expression (dissected): '1362.34'
Avg. embryo expression (LCM): '604.545'
AT4G16370 OPT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.389 x 10-2 83 9 30 56 90.22% 65.12% 92 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004255'
Avg. expression score for this sample: '349.687'
Avg. expression score in LCM sample: '357.365'
Tissue used: 'full endosperm'
AT4G16370 OPT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.00327 x 10-1 77 25 12 39 75.49% 76.47% 102 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004255'
Avg. expression score for this sample: '463.703'
Avg. expression score in LCM sample: '357.365'
Tissue used: 'pure endosperm, no chalazal'
AT4G16370 OPT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-4 155 17 90.12% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16370 OPT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-17 331 8 97.64% 339 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.445 x 10-3 31 1 96.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '172.55'
Avg. embryo expression (LCM): '127.181'
AT4G16360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.10872 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820169'
Avg. expression score for this sample: '136.05'
Avg. expression score in LCM sample: '114.291'
Tissue used: 'pure endosperm, no chalazal'
AT4G16360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 21 0 13 8 100.00% 38.10% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820169'
Avg. expression score for this sample: '155.512'
Avg. expression score in LCM sample: '114.291'
Tissue used: 'full endosperm'
AT4G16355 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.82934'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G16355 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G16355 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16355 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16355 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16355 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '2.13496'
AT4G16350 CBL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.69671'
Avg. embryo expression (LCM): '1.35633'
AT4G16350 CBL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16350 CBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.0207'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G16350 CBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.6533'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G16350 CBL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16350 CBL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16340 SPK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-10 81 3 96.43% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16340 SPK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-11 213 28 88.38% 241 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16340 SPK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.75401 x 10-1 25 7 78.12% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16340 SPK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 27 33 5 13 45.00% 72.22% 60 18 TAIR8 Avg. embryo expression (dissected): '184.261'
Avg. embryo expression (LCM): '146.571'
AT4G16340 SPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.32443 x 10-1 76 66 40 129 53.52% 76.33% 142 169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.818508'
Avg. expression score for this sample: '126.05'
Avg. expression score in LCM sample: '75.9588'
Tissue used: 'full endosperm'
AT4G16340 SPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 15 10 29 53.12% 74.36% 32 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.818508'
Avg. expression score for this sample: '107.544'
Avg. expression score in LCM sample: '75.9588'
Tissue used: 'pure endosperm, no chalazal'
AT4G16330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4 x 10-5 114 375 48 474 23.31% 90.80% 489 522 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '309.063'
Avg. expression score in LCM sample: '137.631'
Tissue used: 'full endosperm'
AT4G16330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-30 203 438 31.67% 641 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 625 36 94.55% 661 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1 x 10-5 41 180 17 58 18.55% 77.33% 221 75 TAIR8 Avg. embryo expression (dissected): '320.359'
Avg. embryo expression (LCM): '79.8349'
AT4G16330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0 x 10-11 78 7 91.76% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.4966 x 10-2 42 165 28 234 20.29% 89.31% 207 262 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '269.423'
Avg. expression score in LCM sample: '137.631'
Tissue used: 'pure endosperm, no chalazal'
AT4G16310 LDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.67165 x 10-1 38 29 33 67 56.72% 67.00% 67 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405566'
Avg. expression score for this sample: '100.282'
Avg. expression score in LCM sample: '90.7302'
Tissue used: 'pure endosperm, no chalazal'
AT4G16310 LDL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.96922 x 10-1 27 16 62.79% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16310 LDL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.19161 x 10-1 52 68 11 22 43.33% 66.67% 120 33 TAIR8 Avg. embryo expression (dissected): '154.347'
Avg. embryo expression (LCM): '123.061'
AT4G16310 LDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.41993 x 10-1 113 67 44 169 62.78% 79.34% 180 213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.405566'
Avg. expression score for this sample: '191.52'
Avg. expression score in LCM sample: '90.7302'
Tissue used: 'full endosperm'
AT4G16310 LDL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-8 314 56 84.86% 370 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16310 LDL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.08573 x 10-1 328 130 71.62% 458 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16295 SPH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16295 SPH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16295 SPH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G16295 SPH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16295 SPH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G16295 SPH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G16280 FCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.87081 x 10-1 13 7 5 4 65.00% 44.44% 20 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.354849'
Avg. expression score for this sample: '53.9758'
Avg. expression score in LCM sample: '23.7077'
Tissue used: 'full endosperm'
AT4G16280 FCA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.695 x 10-3 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16280 FCA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0049 x 10-2 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16280 FCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6985 x 10-1 1 2 4 3 33.33% 42.86% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.354849'
Avg. expression score for this sample: '61.7895'
Avg. expression score in LCM sample: '23.7077'
Tissue used: 'pure endosperm, no chalazal'
AT4G16280 FCA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.95122 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16280 FCA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 3 1 1 2 75.00% 66.67% 4 3 TAIR8 Avg. embryo expression (dissected): '80.2095'
Avg. embryo expression (LCM): '35.1766'
AT4G16270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '61.0732'
Avg. embryo expression (LCM): '41.6442'
AT4G16270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.931'
Avg. expression score in LCM sample: '17.4905'
Tissue used: 'pure endosperm, no chalazal'
AT4G16270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.5233'
Avg. expression score in LCM sample: '17.4905'
Tissue used: 'full endosperm'
AT4G16270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16265 NRPB9B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16265 NRPB9B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G16265 NRPB9B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '6.21334'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G16265 NRPB9B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'