| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G16680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.18748 x 10-1 | 13 | 0 | 100.00% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.04 x 10-4 | 87 | 2 | 97.75% | 89 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.4 x 10-7 | 144 | 1 | 99.31% | 145 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.47032 x 10-1 | 8 | 0 | 3 | 8 | 100.00% | 72.73% | 8 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.087269' Avg. expression score for this sample: '13.097' Avg. expression score in LCM sample: '3.73327' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.6889 x 10-1 | 27 | 4 | 7 | 14 | 87.10% | 66.67% | 31 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.087269' Avg. expression score for this sample: '29.1257' Avg. expression score in LCM sample: '3.73327' Tissue used: 'full endosperm' |
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| AT4G16670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.45455 x 10-1 | 1 | 5 | 0 | 0 | 16.67% | 6 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.34023' Avg. embryo expression (LCM): '7.17095' |
|||||
| AT4G16670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5744 x 10-2 | 29 | 1 | 96.67% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-12 | 929 | 162 | 85.15% | 1091 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.38143 x 10-1 | 121 | 57 | 96 | 214 | 67.98% | 69.03% | 178 | 310 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00046' Avg. expression score for this sample: '323.295' Avg. expression score in LCM sample: '271.191' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G16660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.7 x 10-5 | 174 | 67 | 104 | 379 | 72.20% | 78.47% | 241 | 483 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00046' Avg. expression score for this sample: '381.175' Avg. expression score in LCM sample: '271.191' Tissue used: 'full endosperm' |
|||||
| AT4G16660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 120 | 129 | 47 | 54 | 48.19% | 53.47% | 249 | 101 | TAIR8 |
Avg. embryo expression (dissected): '391.219' Avg. embryo expression (LCM): '247.58' |
||||
| AT4G16660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.7981 x 10-2 | 76 | 14 | 84.44% | 90 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.50646 x 10-1 | 812 | 265 | 75.39% | 1077 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.87045 x 10-1 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 0 | 3 | 75.00% | 100.00% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '80.3804' Avg. expression score in LCM sample: '34.011' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G16650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.33222 x 10-1 | 5 | 0 | 8 | 5 | 100.00% | 38.46% | 5 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '116' Avg. expression score in LCM sample: '34.011' Tissue used: 'full endosperm' |
|||||
| AT4G16650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.08392 x 10-1 | 6 | 1 | 1 | 0 | 85.71% | 0.00% | 7 | 1 | TAIR8 |
Avg. embryo expression (dissected): '142.27' Avg. embryo expression (LCM): '141.485' |
||||
| AT4G16650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.8003 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.428 x 10-3 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.1 | 3 | 0 | 0 | 5 | 100.00% | 100.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.9e-07' Avg. expression score for this sample: '2.88143' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G16640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.8 x 10-6 | 0 | 0 | 1 | 60 | 98.36% | 0 | 61 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.9e-07' Avg. expression score for this sample: '21.2421' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT4G16640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.487516' Avg. embryo expression (LCM): '1.64517' |
||||||
| AT4G16640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.07306 x 10-1 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.1 x 10-6 | 32 | 15 | 68.09% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1783 x 10-2 | 54 | 0 | 100.00% | 54 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 5 | 0 | 2 | 0 | 100.00% | 0.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007563' Avg. expression score for this sample: '100.628' Avg. expression score in LCM sample: '20.1655' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.472 x 10-3 | 35 | 0 | 3 | 4 | 100.00% | 57.14% | 35 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007563' Avg. expression score for this sample: '232.855' Avg. expression score in LCM sample: '20.1655' Tissue used: 'full endosperm' |
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| AT4G16630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.49917 x 10-1 | 7 | 1 | 2 | 0 | 87.50% | 0.00% | 8 | 2 | TAIR8 |
Avg. embryo expression (dissected): '261.315' Avg. embryo expression (LCM): '368.092' |
||||
| AT4G16630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.845 x 10-3 | 1 | 3 | 25.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-7 | 1 | 11 | 8.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16620 | UMAMIT8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 37 | 1 | 97.37% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16620 | UMAMIT8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.1 | 7 | 0 | 0 | 1 | 100.00% | 100.00% | 7 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.7e-07' Avg. expression score for this sample: '216.676' Avg. expression score in LCM sample: '19.8863' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16620 | UMAMIT8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.7 x 10-6 | 48 | 4 | 1 | 36 | 92.31% | 97.30% | 52 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.7e-07' Avg. expression score for this sample: '1085.56' Avg. expression score in LCM sample: '19.8863' Tissue used: 'full endosperm' |
||||
| AT4G16620 | UMAMIT8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 2 | 1 | 33.33% | 0 | 3 | TAIR8 |
Avg. embryo expression (dissected): '28.8927' Avg. embryo expression (LCM): '9.44405' |
||||
| AT4G16620 | UMAMIT8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 41 | 2 | 95.35% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16620 | UMAMIT8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 44 | 2 | 95.65% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.102941' Avg. expression score for this sample: '1.86231' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.02941 x 10-1 | 5 | 0 | 0 | 4 | 100.00% | 100.00% | 5 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.102941' Avg. expression score for this sample: '6.94583' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.40432' Avg. embryo expression (LCM): '6.50534' |
|||||
| AT4G16610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16600 | PGSIP8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16600 | PGSIP8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.54163' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16600 | PGSIP8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.89984' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16600 | PGSIP8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.780361' Avg. embryo expression (LCM): '.941893' |
|||||
| AT4G16600 | PGSIP8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16600 | PGSIP8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16590 | CSLA01 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16590 | CSLA01 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16590 | CSLA01 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16590 | CSLA01 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT4G16590 | CSLA01 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16590 | CSLA01 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-10 | 124 | 9 | 93.23% | 133 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.55205 x 10-1 | 28 | 5 | 16 | 20 | 84.85% | 55.56% | 33 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.584296' Avg. expression score for this sample: '50.7824' Avg. expression score in LCM sample: '34.1139' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.37777 x 10-1 | 34 | 7 | 39 | 35 | 82.93% | 47.30% | 41 | 74 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.584296' Avg. expression score for this sample: '71.1494' Avg. expression score in LCM sample: '34.1139' Tissue used: 'full endosperm' |
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| AT4G16580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.34827 x 10-1 | 16 | 18 | 7 | 5 | 47.06% | 41.67% | 34 | 12 | TAIR8 |
Avg. embryo expression (dissected): '62.8118' Avg. embryo expression (LCM): '34.5612' |
||||
| AT4G16580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.20796 x 10-1 | 20 | 5 | 80.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.7187 | 75 | 47 | 61.48% | 122 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16570 | PRMT7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16570 | PRMT7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.7589' Avg. expression score in LCM sample: '10.2004' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16570 | PRMT7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 1 | 2 | 100.00% | 66.67% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '13.2076' Avg. expression score in LCM sample: '10.2004' Tissue used: 'full endosperm' |
||||
| AT4G16570 | PRMT7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '23.8246' Avg. embryo expression (LCM): '34.3477' |
|||
| AT4G16570 | PRMT7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16570 | PRMT7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.3 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16566 | HINT4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16566 | HINT4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '7.37394' Avg. expression score in LCM sample: '5.73219' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16566 | HINT4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8.02886' Avg. expression score in LCM sample: '5.73219' Tissue used: 'full endosperm' |
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| AT4G16566 | HINT4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.73721' Avg. embryo expression (LCM): '0' |
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| AT4G16566 | HINT4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16566 | HINT4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16563 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.804 x 10-3 | 1060 | 299 | 78.00% | 1359 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16563 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.09067 x 10-1 | 51 | 11 | 16 | 38 | 82.26% | 70.37% | 62 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.0e-09' Avg. expression score for this sample: '193.521' Avg. expression score in LCM sample: '11.0234' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16563 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.6 x 10-10 | 95 | 23 | 9 | 155 | 80.51% | 94.51% | 118 | 164 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.0e-09' Avg. expression score for this sample: '352.961' Avg. expression score in LCM sample: '11.0234' Tissue used: 'full endosperm' |
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| AT4G16563 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.47407 x 10-1 | 20 | 21 | 8 | 5 | 48.78% | 38.46% | 41 | 13 | TAIR8 |
Avg. embryo expression (dissected): '186.477' Avg. embryo expression (LCM): '37.6883' |
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| AT4G16563 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.56108 x 10-1 | 23 | 2 | 92.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16563 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-5 | 205 | 9 | 95.79% | 214 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.366799' Avg. embryo expression (LCM): '0' |
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| AT4G16560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.85875' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.76577' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '23.7905' Avg. embryo expression (LCM): '28.3321' |
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| AT4G16550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.07143 x 10-1 | 1 | 5 | 16.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '4.233' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.04131' Avg. expression score in LCM sample: '4.233' Tissue used: 'full endosperm' |
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| AT4G16540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.37317' Avg. embryo expression (LCM): '14.4549' |
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| AT4G16540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.79066 x 10-1 | 33 | 20 | 62.26% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.78261 x 10-1 | 10 | 11 | 1 | 28 | 47.62% | 96.55% | 21 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.884482' Avg. expression score for this sample: '759.493' Avg. expression score in LCM sample: '91.715' Tissue used: 'pure endosperm, no chalazal' |