| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G16805 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16805 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '17.2584' Avg. expression score in LCM sample: '24.6337' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16805 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '17.0289' Avg. expression score in LCM sample: '24.6337' Tissue used: 'full endosperm' |
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| AT4G16805 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '28.6957' Avg. embryo expression (LCM): '7.02024' |
||||||
| AT4G16805 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16805 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.409 x 10-3 | 282 | 80 | 77.90% | 362 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.42804 x 10-1 | 180 | 62 | 82 | 115 | 74.38% | 58.38% | 242 | 197 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.020555' Avg. expression score for this sample: '146.66' Avg. expression score in LCM sample: '68.066' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1851 x 10-2 | 590 | 118 | 334 | 513 | 83.33% | 60.57% | 708 | 847 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.020555' Avg. expression score for this sample: '367.577' Avg. expression score in LCM sample: '68.066' Tissue used: 'full endosperm' |
|||||
| AT4G16800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.35 x 10-4 | 247 | 105 | 51 | 21 | 70.17% | 29.17% | 352 | 72 | TAIR8 |
Avg. embryo expression (dissected): '217.354' Avg. embryo expression (LCM): '204.328' |
||||
| AT4G16800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.718 x 10-3 | 60 | 44 | 57.69% | 104 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.0 x 10-27 | 431 | 36 | 92.29% | 467 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.1 x 10-29 | 556 | 3 | 99.46% | 559 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.93092 x 10-1 | 79 | 0 | 55 | 10 | 100.00% | 15.38% | 79 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.6e-07' Avg. expression score for this sample: '27.6891' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.2 x 10-13 | 287 | 1 | 38 | 27 | 99.65% | 41.54% | 288 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.6e-07' Avg. expression score for this sample: '54.0675' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G16790 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.66667 x 10-1 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.39159' Avg. embryo expression (LCM): '0' |
|||||
| AT4G16790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.44395 x 10-1 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.14676 x 10-1 | 32 | 11 | 74.42% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16780 | HB-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.09582 x 10-1 | 7 | 7 | 50.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16780 | HB-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.75176 x 10-1 | 56 | 76 | 41 | 137 | 42.42% | 76.97% | 132 | 178 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.131618' Avg. expression score for this sample: '69.808' Avg. expression score in LCM sample: '42.815' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G16780 | HB-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.44994 x 10-1 | 36 | 54 | 22 | 85 | 40.00% | 79.44% | 90 | 107 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.131618' Avg. expression score for this sample: '37.7002' Avg. expression score in LCM sample: '42.815' Tissue used: 'full endosperm' |
||||
| AT4G16780 | HB-2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.29106 x 10-1 | 45 | 101 | 10 | 49 | 30.82% | 83.05% | 146 | 59 | TAIR8 |
Avg. embryo expression (dissected): '71.7314' Avg. embryo expression (LCM): '45.1983' |
|||
| AT4G16780 | HB-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.4516 x 10-2 | 17 | 2 | 89.47% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16780 | HB-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.37486 x 10-1 | 13 | 6 | 68.42% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.39565 x 10-1 | 24 | 3 | 88.89% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.087683' Avg. expression score for this sample: '3.92541' Avg. expression score in LCM sample: '1.24932' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.71919 x 10-1 | 8 | 1 | 0 | 7 | 88.89% | 100.00% | 9 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.087683' Avg. expression score for this sample: '9.69049' Avg. expression score in LCM sample: '1.24932' Tissue used: 'full endosperm' |
|||||
| AT4G16770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.122' Avg. embryo expression (LCM): '2.1224' |
|||||
| AT4G16770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.71429 x 10-1 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.7259 x 10-2 | 26 | 10 | 72.22% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16765 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.96059 x 10-1 | 12 | 1 | 92.31% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16765 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 3 | 66.67% | 100.00% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.87519' Avg. expression score in LCM sample: '10.3032' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16765 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 1 | 3 | 1 | 85.71% | 25.00% | 7 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.9077' Avg. expression score in LCM sample: '10.3032' Tissue used: 'full endosperm' |
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| AT4G16765 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28571 x 10-1 | 0 | 2 | 2 | 0 | 0.00% | 0.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '14.1251' Avg. embryo expression (LCM): '27.5158' |
||||
| AT4G16765 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16765 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16760 | ACX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.8489 x 10-2 | 4928 | 678 | 87.91% | 5606 | TAIR8 | Mutant effect: 'MEG affected by fie' | |||||||
| AT4G16760 | ACX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | MEG | 9.1 x 10-7 | 235 | 39 | 29 | 82 | 85.77% | 73.87% | 274 | 111 | TAIR8 |
Validated by Sanger sequencing: '+' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '44.7335' Avg. expression score in LCM sample: '37.7589' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16760 | ACX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | MEG | 0.0 | 663 | 53 | 57 | 563 | 92.60% | 90.81% | 716 | 620 | TAIR8 |
Validated by Sanger sequencing: '+' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '107.358' Avg. expression score in LCM sample: '37.7589' Tissue used: 'full endosperm' |
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| AT4G16760 | ACX1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.7666 x 10-2 | 248 | 145 | 94 | 46 | 63.10% | 32.86% | 393 | 140 | TAIR8 |
Avg. embryo expression (dissected): '103.567' Avg. embryo expression (LCM): '107.049' |
|||
| AT4G16760 | ACX1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.13 x 10-4 | 235 | 9 | 96.31% | 244 | TAIR8 | Mutant effect: 'MEG affected by fie' | |||||||
| AT4G16760 | ACX1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1641 | 654 | 71.50% | 2295 | TAIR8 | Mutant effect: 'MEG affected by fie' | |||||||
| AT4G16750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.609062' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.27288' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G16750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16745 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1659 x 10-2 | 386 | 2 | 99.48% | 388 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16745 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.0291 x 10-2 | 17 | 0 | 2 | 9 | 100.00% | 81.82% | 17 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-23' Avg. expression score for this sample: '6.76373' Avg. expression score in LCM sample: '.764292' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16745 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.7 x 10-22 | 141 | 0 | 7 | 115 | 100.00% | 94.26% | 141 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-23' Avg. expression score for this sample: '34.6691' Avg. expression score in LCM sample: '.764292' Tissue used: 'full endosperm' |
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| AT4G16745 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.390371' Avg. embryo expression (LCM): '0' |
|||||
| AT4G16745 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 25 | 0 | 100.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16745 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 174 | 6 | 96.67% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16740 | TPS03 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16740 | TPS03 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.15307' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16740 | TPS03 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.305106' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16740 | TPS03 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.489581' Avg. embryo expression (LCM): '0' |
|||||
| AT4G16740 | TPS03 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16740 | TPS03 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16730 | TPS02 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16730 | TPS02 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16730 | TPS02 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.091128' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16730 | TPS02 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.405908' Avg. embryo expression (LCM): '0' |
||||
| AT4G16730 | TPS02 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16730 | TPS02 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 3274 | 918 | 78.10% | 4192 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.71911 x 10-1 | 1394 | 1121 | 627 | 1903 | 55.43% | 75.22% | 2515 | 2530 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.631802' Avg. expression score for this sample: '5230.68' Avg. expression score in LCM sample: '1054.41' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.03271 x 10-1 | 872 | 598 | 617 | 1663 | 59.32% | 72.94% | 1470 | 2280 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.631802' Avg. expression score for this sample: '3232.43' Avg. expression score in LCM sample: '1054.41' Tissue used: 'full endosperm' |
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| AT4G16720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.6 x 10-11 | 3041 | 4616 | 1119 | 1747 | 39.72% | 60.96% | 7657 | 2866 | TAIR8 |
Avg. embryo expression (dissected): '15953' Avg. embryo expression (LCM): '9127.25' |
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| AT4G16720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-8 | 445 | 131 | 77.26% | 576 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 4421 | 1249 | 77.97% | 5670 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 922 | 58 | 94.08% | 980 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.32244 x 10-1 | 201 | 105 | 70 | 209 | 65.69% | 74.91% | 306 | 279 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.1e-10' Avg. expression score for this sample: '143.56' Avg. expression score in LCM sample: '62.6425' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6 x 10-12 | 394 | 133 | 125 | 589 | 74.76% | 82.49% | 527 | 714 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.1e-10' Avg. expression score for this sample: '231.837' Avg. expression score in LCM sample: '62.6425' Tissue used: 'full endosperm' |
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| AT4G16710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.34539 x 10-1 | 77 | 110 | 22 | 21 | 41.18% | 48.84% | 187 | 43 | TAIR8 |
Avg. embryo expression (dissected): '74.3039' Avg. embryo expression (LCM): '37.0604' |
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| AT4G16710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.98701 x 10-1 | 90 | 21 | 81.08% | 111 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-14 | 740 | 94 | 88.73% | 834 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16700 | PSD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 3 | 57.14% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16700 | PSD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 2 | 0 | 2 | 33.33% | 100.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.277213' Avg. expression score for this sample: '4.89916' Avg. expression score in LCM sample: '2.7926' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16700 | PSD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.72584 x 10-1 | 4 | 8 | 4 | 7 | 33.33% | 63.64% | 12 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.277213' Avg. expression score for this sample: '13.4639' Avg. expression score in LCM sample: '2.7926' Tissue used: 'full endosperm' |
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| AT4G16700 | PSD1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.77087 x 10-1 | 19 | 13 | 1 | 3 | 59.38% | 75.00% | 32 | 4 | TAIR8 |
Avg. embryo expression (dissected): '25.4738' Avg. embryo expression (LCM): '36.6585' |
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| AT4G16700 | PSD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.32258 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16700 | PSD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 5 | 44.44% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16695 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.85648 x 10-1 | 17 | 5 | 77.27% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.68813 x 10-1 | 11 | 7 | 3 | 4 | 61.11% | 57.14% | 18 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '107.895' Avg. expression score in LCM sample: '64.6855' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.02562 x 10-1 | 17 | 1 | 8 | 9 | 94.44% | 52.94% | 18 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '128.031' Avg. expression score in LCM sample: '64.6855' Tissue used: 'full endosperm' |
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| AT4G16695 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.51186 x 10-1 | 9 | 4 | 4 | 2 | 69.23% | 33.33% | 13 | 6 | TAIR8 |
Avg. embryo expression (dissected): '84.5802' Avg. embryo expression (LCM): '76.758' |
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| AT4G16695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.07557 x 10-1 | 23 | 5 | 82.14% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16690 | MES16 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.53934 x 10-1 | 135 | 93 | 59.21% | 228 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16690 | MES16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.08831 x 10-1 | 322 | 261 | 161 | 484 | 55.23% | 75.04% | 583 | 645 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031288' Avg. expression score for this sample: '5002.82' Avg. expression score in LCM sample: '863.458' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16690 | MES16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.2104 x 10-2 | 590 | 526 | 230 | 709 | 52.87% | 75.51% | 1116 | 939 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031288' Avg. expression score for this sample: '6043.84' Avg. expression score in LCM sample: '863.458' Tissue used: 'full endosperm' |
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| AT4G16690 | MES16 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.39623 x 10-1 | 165 | 230 | 68 | 99 | 41.77% | 59.28% | 395 | 167 | TAIR8 |
Avg. embryo expression (dissected): '2488.04' Avg. embryo expression (LCM): '346.479' |
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| AT4G16690 | MES16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.2839 x 10-2 | 155 | 61 | 71.76% | 216 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16690 | MES16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.27211 x 10-1 | 43 | 31 | 58.11% | 74 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.20527 x 10-1 | 143 | 37 | 79.44% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.14098 x 10-1 | 11 | 2 | 2 | 8 | 84.62% | 80.00% | 13 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000506' Avg. expression score for this sample: '38.3185' Avg. expression score in LCM sample: '17.7551' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.009 x 10-3 | 65 | 12 | 8 | 42 | 84.42% | 84.00% | 77 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000506' Avg. expression score for this sample: '106.612' Avg. expression score in LCM sample: '17.7551' Tissue used: 'full endosperm' |
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| AT4G16680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.31484' Avg. embryo expression (LCM): '2.37357' |