| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G416156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.93 x 10-7 | 214 | 119 | 346 | 165 | 64.26% | 32.29% | 333 | 511 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.93e-07' χ2 p-value for Mo17 x B73: '1.18e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G416156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.25786 x 10-1 | 71 | 32 | 22 | 54 | 68.93% | 71.05% | 103 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.625786' χ2 p-value for Mo17 x B73: '.4173044' Biased in favor of strain: '' |
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| GRMZM2G416110 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48 x 10-8 | 2 | 36 | 9 | 55 | 5.26% | 85.94% | 38 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.48e-08' χ2 p-value for Mo17 x B73: '8.92e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G416110 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.2208 x 10-3 | 1 | 18 | 9 | 50 | 5.26% | 84.75% | 19 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.36e-08' χ2 p-value for Mo17 x B73: '.0032208' Biased in favor of strain: 'Mo17' |
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| GRMZM2G416069 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.61825 x 10-2 | 380 | 291 | 191 | 237 | 56.63% | 55.37% | 671 | 428 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005908' χ2 p-value for Mo17 x B73: '.0261825' Biased in favor of strain: '' |
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| GRMZM2G416069 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6238 x 10-3 | 283 | 98 | 127 | 139 | 74.28% | 52.26% | 381 | 266 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016238' χ2 p-value for Mo17 x B73: '6.17e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G416045 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G416045 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G416019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.39743 x 10-1 | 62 | 50 | 87 | 88 | 55.36% | 50.29% | 112 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.939743' Biased in favor of strain: '' |
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| GRMZM2G416019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.340949 x 10-1 | 35 | 10 | 14 | 25 | 77.78% | 64.10% | 45 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138524' χ2 p-value for Mo17 x B73: '.7340949' Biased in favor of strain: '' |
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| GRMZM2G415955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G415955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 1 | 100.00% | 20.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G415846 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 11 | 0 | 17 | 0 | 100.00% | 0.00% | 11 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'B73' |
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| GRMZM2G415846 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 8 | 0 | 87.50% | 0.00% | 8 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G415793 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.41 x 10-8 | 118 | 11 | 61 | 13 | 91.47% | 17.57% | 129 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.48e-21' χ2 p-value for Mo17 x B73: '2.41e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G415793 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.46 x 10-11 | 190 | 25 | 121 | 64 | 88.37% | 34.59% | 215 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.46e-11' χ2 p-value for Mo17 x B73: '2.17e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G415785 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 0 | 0 | 42.86% | 7 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G415785 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.7604 x 10-2 | 13 | 21 | 9 | 37 | 38.24% | 80.43% | 34 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004368' χ2 p-value for Mo17 x B73: '.047604' Biased in favor of strain: '' |
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| GRMZM2G415498 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 96 | 64 | 93 | 50 | 60.00% | 34.97% | 160 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.0003233' Biased in favor of strain: 'B73' |
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| GRMZM2G415498 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630249 x 10-1 | 68 | 13 | 28 | 60 | 83.95% | 68.18% | 81 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009675' χ2 p-value for Mo17 x B73: '.7630249' Biased in favor of strain: '' |
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| GRMZM2G415491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 36 | 36 | 32 | 39 | 50.00% | 54.93% | 72 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.4061165' Biased in favor of strain: '' |
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| GRMZM2G415491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.772978 x 10-1 | 62 | 26 | 32 | 68 | 70.45% | 68.00% | 88 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4510075' χ2 p-value for Mo17 x B73: '.7772978' Biased in favor of strain: '' |
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| GRMZM2G415470 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.75 x 10-6 | 52 | 10 | 15 | 55 | 83.87% | 78.57% | 62 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.61e-08' χ2 p-value for Mo17 x B73: '1.75e-06' Biased in favor of strain: '' |
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| GRMZM2G415470 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.737457 x 10-1 | 142 | 60 | 81 | 138 | 70.30% | 63.01% | 202 | 219 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2737457' χ2 p-value for Mo17 x B73: '.2514787' Biased in favor of strain: '' |
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| GRMZM2G415390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 0 | 2 | 33.33% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G415390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G415359 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.62 x 10-7 | 834 | 594 | 475 | 329 | 58.40% | 40.92% | 1428 | 804 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.14e-10' χ2 p-value for Mo17 x B73: '2.62e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G415359 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.94 x 10-7 | 655 | 224 | 773 | 825 | 74.52% | 51.63% | 879 | 1598 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.94e-07' χ2 p-value for Mo17 x B73: '2.98e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G415343 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.75075 x 10-2 | 485 | 538 | 385 | 445 | 47.41% | 53.61% | 1023 | 830 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0975075' χ2 p-value for Mo17 x B73: '.0372849' Biased in favor of strain: '' |
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| GRMZM2G415343 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.96042 x 10-2 | 125 | 132 | 104 | 272 | 48.64% | 72.34% | 257 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.73e-10' χ2 p-value for Mo17 x B73: '.0196042' Biased in favor of strain: '' |
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| GRMZM2G415229 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 6 | 8 | 12 | 4 | 42.86% | 25.00% | 14 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G415229 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.99984 x 10-1 | 8 | 4 | 6 | 15 | 66.67% | 71.43% | 12 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.643429' Biased in favor of strain: '' |
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| GRMZM2G415215 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.366169 x 10-1 | 205 | 186 | 156 | 115 | 52.43% | 42.44% | 391 | 271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3366169' χ2 p-value for Mo17 x B73: '.0127537' Biased in favor of strain: '' |
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| GRMZM2G415215 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.48622 x 10-2 | 77 | 23 | 76 | 113 | 77.00% | 59.79% | 100 | 189 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0283802' χ2 p-value for Mo17 x B73: '.0448622' Biased in favor of strain: '' |
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| GRMZM2G415117 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G415117 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G415022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 4 | 66.67% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G415022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G415012 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1568 | 736 | 1559 | 710 | 68.06% | 31.29% | 2304 | 2269 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G415012 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0 x 10-30 | 1905 | 552 | 1175 | 1496 | 77.53% | 56.01% | 2457 | 2671 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.09e-30' χ2 p-value for Mo17 x B73: '1.53e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G415007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.585 x 10-4 | 77 | 32 | 46 | 17 | 70.64% | 26.98% | 109 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000163' χ2 p-value for Mo17 x B73: '.0002585' Biased in favor of strain: 'B73' |
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| GRMZM2G415007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.027835 x 10-1 | 58 | 6 | 14 | 21 | 90.62% | 60.00% | 64 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000479' χ2 p-value for Mo17 x B73: '.4027835' Biased in favor of strain: '' |
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| GRMZM2G414995 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 796 | 121 | 876 | 100 | 86.80% | 10.25% | 917 | 976 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G414995 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.74 x 10-6 | 40 | 0 | 36 | 4 | 100.00% | 10.00% | 40 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '2.90e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G414955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.2278 | 77 | 34 | 26 | 18 | 69.37% | 40.91% | 111 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000448' χ2 p-value for Mo17 x B73: '.2278' Biased in favor of strain: '' |
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| GRMZM2G414955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1201 x 10-3 | 416 | 95 | 116 | 156 | 81.41% | 57.35% | 511 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.56e-12' χ2 p-value for Mo17 x B73: '.0011201' Biased in favor of strain: 'B73' |
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| GRMZM2G414935 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 1 | 1 | 50.00% | 50.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G414935 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 2 | 50.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G414915 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.110798 x 10-1 | 146 | 166 | 159 | 174 | 46.79% | 52.25% | 312 | 333 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.257518' χ2 p-value for Mo17 x B73: '.4110798' Biased in favor of strain: '' |
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| GRMZM2G414915 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 4 | 1 | 3 | 81.82% | 75.00% | 22 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1316724' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G414848 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9859 x 10-3 | 546 | 361 | 595 | 493 | 60.20% | 45.31% | 907 | 1088 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.11e-10' χ2 p-value for Mo17 x B73: '.0019859' Biased in favor of strain: 'B73' |
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| GRMZM2G414848 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.12 x 10-16 | 1117 | 337 | 706 | 760 | 76.82% | 51.84% | 1454 | 1466 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.12e-16' χ2 p-value for Mo17 x B73: '2.16e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G414813 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.36 x 10-14 | 1336 | 977 | 1547 | 1035 | 57.76% | 40.09% | 2313 | 2582 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.36e-14' χ2 p-value for Mo17 x B73: '7.05e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G414813 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.51 x 10-10 | 167 | 22 | 88 | 47 | 88.36% | 34.81% | 189 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.51e-10' χ2 p-value for Mo17 x B73: '4.14e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G414791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G414791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G414727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.46 x 10-20 | 206 | 10 | 166 | 35 | 95.37% | 17.41% | 216 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.46e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G414727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.48 x 10-15 | 173 | 12 | 133 | 42 | 93.51% | 24.00% | 185 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.48e-15' χ2 p-value for Mo17 x B73: '4.90e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G414668 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G414668 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G414540 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 3 | 4 | 2 | 82.35% | 33.33% | 17 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G414540 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 3 | 1 | 50.00% | 25.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: '' |
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| GRMZM2G414537 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 7 | 1 | 100.00% | 12.50% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G414537 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G414528 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.17 x 10-7 | 659 | 490 | 603 | 367 | 57.35% | 37.84% | 1149 | 970 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.17e-07' χ2 p-value for Mo17 x B73: '3.52e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G414528 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.19467 x 10-2 | 146 | 35 | 70 | 98 | 80.66% | 58.33% | 181 | 168 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000649' χ2 p-value for Mo17 x B73: '.0219467' Biased in favor of strain: '' |
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| GRMZM2G414496 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.92 x 10-10 | 500 | 255 | 470 | 294 | 66.23% | 38.48% | 755 | 764 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.81e-19' χ2 p-value for Mo17 x B73: '1.92e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G414496 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.74 x 10-5 | 334 | 109 | 176 | 227 | 75.40% | 56.33% | 443 | 403 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000974' χ2 p-value for Mo17 x B73: '.0000107' Biased in favor of strain: 'B73' |
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| GRMZM2G414387 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.98735 x 10-1 | 88 | 58 | 84 | 93 | 60.27% | 52.54% | 146 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0130348' χ2 p-value for Mo17 x B73: '.498735' Biased in favor of strain: '' |
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| GRMZM2G414387 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.962697 x 10-1 | 50 | 17 | 26 | 40 | 74.63% | 60.61% | 67 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.166924' χ2 p-value for Mo17 x B73: '.2962697' Biased in favor of strain: '' |
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| GRMZM2G414373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65 x 10-5 | 189 | 280 | 133 | 294 | 40.30% | 68.85% | 469 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000265' χ2 p-value for Mo17 x B73: '6.63e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM2G414373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.353 x 10-4 | 58 | 54 | 23 | 104 | 51.79% | 81.89% | 112 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008353' χ2 p-value for Mo17 x B73: '.0002734' Biased in favor of strain: 'Mo17' |
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| GRMZM2G414159 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22 x 10-7 | 367 | 241 | 346 | 219 | 60.36% | 38.76% | 608 | 565 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.22e-07' χ2 p-value for Mo17 x B73: '9.15e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G414159 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.8658 x 10-3 | 515 | 207 | 386 | 345 | 71.33% | 47.20% | 722 | 731 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0078658' χ2 p-value for Mo17 x B73: '5.88e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G414140 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 0 | 3 | 0.00% | 100.00% | 11 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G414140 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G414047 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.184 x 10-4 | 24 | 5 | 23 | 1 | 82.76% | 4.17% | 29 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004184' χ2 p-value for Mo17 x B73: '7.10e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G414047 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G414043 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48 x 10-18 | 1199 | 641 | 842 | 521 | 65.16% | 38.22% | 1840 | 1363 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.10e-38' χ2 p-value for Mo17 x B73: '3.48e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G414043 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.857 x 10-4 | 1679 | 714 | 1017 | 1291 | 70.16% | 55.94% | 2393 | 2308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002857' χ2 p-value for Mo17 x B73: '7.76e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G414007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 293 | 0 | 215 | 0 | 100.00% | 0.00% | 293 | 215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G414007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6 x 10-24 | 207 | 0 | 164 | 0 | 100.00% | 0.00% | 207 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.60e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G414002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.550974 x 10-1 | 193 | 242 | 182 | 188 | 44.37% | 50.81% | 435 | 370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0188052' χ2 p-value for Mo17 x B73: '.7550974' Biased in favor of strain: '' |
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| GRMZM2G414002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.47629 x 10-2 | 189 | 69 | 126 | 163 | 73.26% | 56.40% | 258 | 289 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0247629' χ2 p-value for Mo17 x B73: '.000214' Biased in favor of strain: '' |
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| GRMZM2G413897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 409 | 0 | 252 | 2 | 100.00% | 0.79% | 409 | 254 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G413897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G413853 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.319 x 10-4 | 109 | 61 | 135 | 60 | 64.12% | 30.77% | 170 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002319' χ2 p-value for Mo17 x B73: '7.84e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G413853 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 8 | 3 | 0 | 11.11% | 0.00% | 9 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G413835 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G413835 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 1 | 0 | 100.00% | 0.00% | 7 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G413822 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63 x 10-11 | 80 | 3 | 89 | 19 | 96.39% | 17.59% | 83 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.87e-17' χ2 p-value for Mo17 x B73: '1.63e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G413822 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 12 | 9 | 83.33% | 42.86% | 6 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0206375' Biased in favor of strain: '' |
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| GRMZM2G413717 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.18 x 10-12 | 7 | 65 | 13 | 86 | 9.72% | 86.87% | 72 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.18e-12' χ2 p-value for Mo17 x B73: '2.19e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G413717 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.13 x 10-9 | 4 | 56 | 0 | 67 | 6.67% | 100.00% | 60 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.26e-23' χ2 p-value for Mo17 x B73: '7.13e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G413711 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 13 | 5 | 4 | 51.85% | 44.44% | 27 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8473896' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G413711 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G413652 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 8 | 14 | 8 | 8 | 36.36% | 50.00% | 22 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2008251' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G413652 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 6 | 6 | 3 | 75.00% | 33.33% | 24 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864874' χ2 p-value for Mo17 x B73: '.0338948' Biased in favor of strain: '' |
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| GRMZM2G413647 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 14 | 14 | 18 | 9 | 50.00% | 33.33% | 28 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G413647 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 8 | 10 | 80.00% | 55.56% | 5 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |