Displaying data sets 5401 - 5500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G59580 UGT76E1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59580 UGT76E1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409859'
Avg. expression score for this sample: '3.0607'
Avg. expression score in LCM sample: '.970062'
Tissue used: 'pure endosperm, no chalazal'
AT5G59580 UGT76E1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 4 0 5 0.00% 100.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409859'
Avg. expression score for this sample: '7.43746'
Avg. expression score in LCM sample: '.970062'
Tissue used: 'full endosperm'
AT5G59580 UGT76E1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.88953'
Avg. embryo expression (LCM): '0'
AT5G59580 UGT76E1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59580 UGT76E1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59570 BOA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.14222 x 10-1 57 20 74.03% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59570 BOA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.47153 x 10-1 4 3 3 18 57.14% 85.71% 7 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.4243'
Avg. expression score in LCM sample: '2.02831'
Tissue used: 'pure endosperm, no chalazal'
AT5G59570 BOA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.66455 x 10-1 22 11 17 28 66.67% 62.22% 33 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '47.133'
Avg. expression score in LCM sample: '2.02831'
Tissue used: 'full endosperm'
AT5G59570 BOA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 21 3 15 30.00% 83.33% 30 18 TAIR8 Avg. embryo expression (dissected): '76.1278'
Avg. embryo expression (LCM): '11.265'
AT5G59570 BOA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.40687 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59570 BOA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.75565 x 10-1 77 44 63.64% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59560 SRR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.27941 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59560 SRR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '64.0688'
Avg. expression score in LCM sample: '37.3915'
Tissue used: 'pure endosperm, no chalazal'
AT5G59560 SRR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '109.102'
Avg. expression score in LCM sample: '37.3915'
Tissue used: 'full endosperm'
AT5G59560 SRR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 2 1 0 0.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '94.467'
Avg. embryo expression (LCM): '121.793'
AT5G59560 SRR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59560 SRR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0171 x 10-2 11 10 52.38% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59550 RDUF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1087 40 96.45% 1127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59550 RDUF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3 x 10-7 1139 226 313 380 83.44% 54.83% 1365 693 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-20'
Avg. expression score for this sample: '539.314'
Avg. expression score in LCM sample: '50.7813'
Tissue used: 'pure endosperm, no chalazal'
AT5G59550 RDUF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-15 759 129 298 762 85.47% 71.89% 888 1060 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-20'
Avg. expression score for this sample: '384.763'
Avg. expression score in LCM sample: '50.7813'
Tissue used: 'full endosperm'
AT5G59550 RDUF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.02 x 10-4 263 118 57 32 69.03% 35.96% 381 89 TAIR8 Avg. embryo expression (dissected): '194.108'
Avg. embryo expression (LCM): '35.2017'
AT5G59550 RDUF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.35377 x 10-1 123 35 77.85% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59550 RDUF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.58708 x 10-1 337 93 78.37% 430 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.7634'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 295 9 97.04% 304 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '.186483'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 9.0226 x 10-2 11 0 0 0 100.00% 11 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '2.35848'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3333 x 10-2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59520 ZIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59520 ZIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59520 ZIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.960386'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59520 ZIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59520 ZIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59520 ZIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.64286 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59510 RTFL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59510 RTFL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.824486'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59510 RTFL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59510 RTFL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59510 RTFL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59510 RTFL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59505 MIR172E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59505 MIR172E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59505 MIR172E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59505 MIR172E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G59505 MIR172E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59505 MIR172E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-10 108 7 93.91% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.15565 x 10-1 91 73 20 71 55.49% 78.02% 164 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.712792'
Avg. expression score for this sample: '71.5731'
Avg. expression score in LCM sample: '35.422'
Tissue used: 'pure endosperm, no chalazal'
AT5G59500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5193 x 10-1 53 33 68 194 61.63% 74.05% 86 262 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.712792'
Avg. expression score for this sample: '67.1574'
Avg. expression score in LCM sample: '35.422'
Tissue used: 'full endosperm'
AT5G59500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.02041 x 10-1 234 239 27 27 49.47% 50.00% 473 54 TAIR8 Avg. embryo expression (dissected): '209.514'
Avg. embryo expression (LCM): '209.314'
AT5G59500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.51 x 10-4 36 3 92.31% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-5 114 21 84.44% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.960156'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.463817'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.268567'
Avg. embryo expression (LCM): '0'
AT5G59490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.6982 x 10-1 65 27 55 86 70.65% 60.99% 92 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00131'
Avg. expression score for this sample: '36.8851'
Avg. expression score in LCM sample: '29.2782'
Tissue used: 'pure endosperm, no chalazal'
AT5G59480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-5 145 44 84 303 76.72% 78.29% 189 387 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00131'
Avg. expression score for this sample: '58.3994'
Avg. expression score in LCM sample: '29.2782'
Tissue used: 'full endosperm'
AT5G59480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.92851 x 10-1 39 47 13 16 45.35% 55.17% 86 29 TAIR8 Avg. embryo expression (dissected): '29.2728'
Avg. embryo expression (LCM): '25.0167'
AT5G59480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.12584 x 10-1 73 19 79.35% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6 x 10-12 462 56 89.19% 518 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4 x 10-12 499 63 88.79% 562 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 4 50.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525992'
Avg. expression score for this sample: '4.31966'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G59470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.55576 x 10-1 9 7 6 25 56.25% 80.65% 16 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525992'
Avg. expression score for this sample: '12.7404'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G59470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 3 0 0 50.00% 6 0 TAIR8 Avg. embryo expression (dissected): '3.86725'
Avg. embryo expression (LCM): '10.499'
AT5G59470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.66019 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.93702 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.496 x 10-3 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '27.9608'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'pure endosperm, no chalazal'
AT5G59460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.0617'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'full endosperm'
AT5G59460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '34.4733'
Avg. embryo expression (LCM): '47.7979'
AT5G59460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 0 4 66.67% 100.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095605'
Avg. expression score for this sample: '23.2558'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'pure endosperm, no chalazal'
AT5G59450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9387 x 10-2 19 0 3 5 100.00% 62.50% 19 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095605'
Avg. expression score for this sample: '74.1432'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'full endosperm'
AT5G59450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 3 2 50.00% 40.00% 16 5 TAIR8 Avg. embryo expression (dissected): '69.4105'
Avg. embryo expression (LCM): '28.9852'
AT5G59450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.06666 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.18303 x 10-1 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59440 ZEU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '64.4758'
Avg. expression score in LCM sample: '22.0763'
Tissue used: 'pure endosperm, no chalazal'
AT5G59440 ZEU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '196.766'
Avg. expression score in LCM sample: '22.0763'
Tissue used: 'full endosperm'
AT5G59440 ZEU1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '148.989'
Avg. embryo expression (LCM): '204.127'
AT5G59440 ZEU1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59440 ZEU1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59440 ZEU1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G59430 TRP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.4161 x 10-1 200 62 104 144 76.34% 58.06% 262 248 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049116'
Avg. expression score for this sample: '88.5897'
Avg. expression score in LCM sample: '63.5244'
Tissue used: 'pure endosperm, no chalazal'
AT5G59430 TRP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4815 x 10-2 337 97 184 365 77.65% 66.48% 434 549 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049116'
Avg. expression score for this sample: '124.449'
Avg. expression score in LCM sample: '63.5244'
Tissue used: 'full endosperm'
AT5G59430 TRP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.542 x 10-3 170 75 54 42 69.39% 43.75% 245 96 TAIR8 Avg. embryo expression (dissected): '93.4197'
Avg. embryo expression (LCM): '89.8692'
AT5G59430 TRP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 69 29 70.41% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'