| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G17098 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.73684 x 10-1 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17098 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17090 | CT-BMY | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.22021 x 10-1 | 22 | 8 | 7 | 23 | 73.33% | 76.67% | 30 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.5e-11' Avg. expression score for this sample: '92.5265' Avg. expression score in LCM sample: '7.96627' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17090 | CT-BMY | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.3 x 10-12 | 86 | 14 | 18 | 184 | 86.00% | 91.09% | 100 | 202 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.5e-11' Avg. expression score for this sample: '257.139' Avg. expression score in LCM sample: '7.96627' Tissue used: 'full endosperm' |
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| AT4G17090 | CT-BMY | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.80172 x 10-1 | 1 | 6 | 2 | 3 | 14.29% | 60.00% | 7 | 5 | TAIR8 |
Avg. embryo expression (dissected): '29.1245' Avg. embryo expression (LCM): '6.80675' |
|||
| AT4G17090 | CT-BMY | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.8314 x 10-2 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17090 | CT-BMY | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.39182 x 10-1 | 57 | 6 | 90.48% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17090 | CT-BMY | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-15 | 562 | 5 | 99.12% | 567 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17085 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.51642 x 10-1 | 11 | 2 | 4 | 7 | 84.62% | 63.64% | 13 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '25.3642' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17085 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.51317 x 10-1 | 4 | 4 | 5 | 8 | 50.00% | 61.54% | 8 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '20.1459' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G17085 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 2 | 2 | 50.00% | 50.00% | 20 | 4 | TAIR8 |
Avg. embryo expression (dissected): '39.5132' Avg. embryo expression (LCM): '41.0665' |
||||
| AT4G17085 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17085 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.9834 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17085 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6084 x 10-2 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 3 | 0 | 2 | 25.00% | 100.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.731094' Avg. expression score for this sample: '593.276' Avg. expression score in LCM sample: '234.211' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G17080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.84541 x 10-1 | 6 | 0 | 2 | 6 | 100.00% | 75.00% | 6 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.731094' Avg. expression score for this sample: '518.061' Avg. expression score in LCM sample: '234.211' Tissue used: 'full endosperm' |
|||||
| AT4G17080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '443.059' Avg. embryo expression (LCM): '215.241' |
|||||
| AT4G17080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G17080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.80519 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.3099 x 10-2 | 20 | 1 | 95.24% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.56449 x 10-1 | 45 | 5 | 13 | 6 | 90.00% | 31.58% | 50 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001273' Avg. expression score for this sample: '66.6832' Avg. expression score in LCM sample: '53.1918' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.25 x 10-4 | 66 | 2 | 17 | 40 | 97.06% | 70.18% | 68 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001273' Avg. expression score for this sample: '87.7932' Avg. expression score in LCM sample: '53.1918' Tissue used: 'full endosperm' |
|||||
| AT4G17070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.46955 x 10-1 | 37 | 13 | 16 | 8 | 74.00% | 33.33% | 50 | 24 | TAIR8 |
Avg. embryo expression (dissected): '136.585' Avg. embryo expression (LCM): '67.1884' |
||||
| AT4G17070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.15195 x 10-1 | 7 | 3 | 70.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.8881 x 10-2 | 67 | 6 | 91.78% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.4 x 10-12 | 240 | 2 | 99.17% | 242 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17060 | FIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 220 | 66 | 95 | 105 | 76.92% | 52.50% | 286 | 200 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018525' Avg. expression score for this sample: '659.127' Avg. expression score in LCM sample: '200.818' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17060 | FIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.146 x 10-3 | 471 | 105 | 257 | 448 | 81.77% | 63.55% | 576 | 705 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018525' Avg. expression score for this sample: '382.833' Avg. expression score in LCM sample: '200.818' Tissue used: 'full endosperm' |
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| AT4G17060 | FIP2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.646 x 10-3 | 234 | 140 | 46 | 34 | 62.57% | 42.50% | 374 | 80 | TAIR8 |
Avg. embryo expression (dissected): '741.013' Avg. embryo expression (LCM): '462.181' |
|||
| AT4G17060 | FIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.24911 x 10-1 | 102 | 44 | 69.86% | 146 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17060 | FIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.0973 x 10-1 | 827 | 378 | 68.63% | 1205 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17060 | FIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1063 | 128 | 89.25% | 1191 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17050 | UGLYAH | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '30.7085' Avg. expression score in LCM sample: '17.8433' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17050 | UGLYAH | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '104.951' Avg. expression score in LCM sample: '17.8433' Tissue used: 'full endosperm' |
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| AT4G17050 | UGLYAH | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '63.4339' Avg. embryo expression (LCM): '50.1087' |
|||||
| AT4G17050 | UGLYAH | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17050 | UGLYAH | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17050 | UGLYAH | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17040 | CLPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.92122 x 10-1 | 18 | 2 | 5 | 13 | 90.00% | 72.22% | 20 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.29019' Avg. expression score for this sample: '44.8349' Avg. expression score in LCM sample: '30.8362' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17040 | CLPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.12726 x 10-1 | 12 | 4 | 8 | 17 | 75.00% | 68.00% | 16 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.29019' Avg. expression score for this sample: '49.7558' Avg. expression score in LCM sample: '30.8362' Tissue used: 'full endosperm' |
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| AT4G17040 | CLPR4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.43944 x 10-1 | 18 | 24 | 4 | 3 | 42.86% | 42.86% | 42 | 7 | TAIR8 |
Avg. embryo expression (dissected): '96.8473' Avg. embryo expression (LCM): '105.417' |
|||
| AT4G17040 | CLPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17040 | CLPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17040 | CLPR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.17658 x 10-1 | 27 | 3 | 90.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17030 | EXLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17030 | EXLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.664566' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G17030 | EXLB1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.08392 x 10-1 | 5 | 0 | 2 | 0 | 100.00% | 0.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '3.23336' Avg. embryo expression (LCM): '23.0701' |
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| AT4G17030 | EXLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17030 | EXLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17030 | EXLB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G17020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 10 | 5 | 19 | 44.44% | 79.17% | 18 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000296' Avg. expression score for this sample: '37.4401' Avg. expression score in LCM sample: '51.4133' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.8 x 10-5 | 70 | 18 | 23 | 133 | 79.55% | 85.26% | 88 | 156 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000296' Avg. expression score for this sample: '75.6697' Avg. expression score in LCM sample: '51.4133' Tissue used: 'full endosperm' |
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| AT4G17020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 14 | 16 | 1 | 4 | 46.67% | 80.00% | 30 | 5 | TAIR8 |
Avg. embryo expression (dissected): '43.4882' Avg. embryo expression (LCM): '65.5809' |
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| AT4G17020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.27151 x 10-1 | 11 | 6 | 64.71% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.17664 x 10-1 | 82 | 28 | 74.55% | 110 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3163 x 10-2 | 81 | 8 | 91.01% | 89 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.89532 x 10-1 | 27 | 16 | 14 | 15 | 62.79% | 51.72% | 43 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '65.2228' Avg. expression score in LCM sample: '34.496' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.55307 x 10-1 | 45 | 18 | 19 | 51 | 71.43% | 72.86% | 63 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '61.7419' Avg. expression score in LCM sample: '34.496' Tissue used: 'full endosperm' |
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| AT4G17010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.96072 x 10-1 | 47 | 30 | 9 | 12 | 61.04% | 57.14% | 77 | 21 | TAIR8 |
Avg. embryo expression (dissected): '97.0407' Avg. embryo expression (LCM): '91.979' |
||||
| AT4G17010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.55388 x 10-1 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.981 x 10-3 | 50 | 9 | 84.75% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.1482 x 10-2 | 57 | 15 | 79.17% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.99414 x 10-1 | 55 | 23 | 15 | 45 | 70.51% | 75.00% | 78 | 60 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.272409' Avg. expression score for this sample: '98.4163' Avg. expression score in LCM sample: '85.7329' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G17000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.09001 x 10-1 | 52 | 7 | 35 | 48 | 88.14% | 57.83% | 59 | 83 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.272409' Avg. expression score for this sample: '101.347' Avg. expression score in LCM sample: '85.7329' Tissue used: 'full endosperm' |
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| AT4G17000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.1256 x 10-2 | 133 | 106 | 18 | 35 | 55.65% | 66.04% | 239 | 53 | TAIR8 |
Avg. embryo expression (dissected): '300.94' Avg. embryo expression (LCM): '240.12' |
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| AT4G17000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.5682 x 10-2 | 2 | 5 | 28.57% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.56313 x 10-1 | 50 | 12 | 80.65% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G17000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.29 x 10-4 | 53 | 4 | 92.98% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16990 | RLM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 2 | 2 | 50.00% | 0 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.668176' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16990 | RLM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.40405 x 10-1 | 5 | 1 | 1 | 5 | 83.33% | 83.33% | 6 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.78443' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16990 | RLM3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.66667 x 10-1 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.9465' Avg. embryo expression (LCM): '0' |
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| AT4G16990 | RLM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.5848 x 10-2 | 9 | 11 | 45.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16990 | RLM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16990 | RLM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '17.0668' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.35117 x 10-1 | 8 | 0 | 2 | 1 | 100.00% | 33.33% | 8 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.3362' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G16980 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.02478 x 10-1 | 15 | 11 | 3 | 2 | 57.69% | 40.00% | 26 | 5 | TAIR8 |
Avg. embryo expression (dissected): '527.204' Avg. embryo expression (LCM): '54.2154' |
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| AT4G16980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.35353 x 10-1 | 11 | 7 | 4 | 21 | 61.11% | 84.00% | 18 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.438537' Avg. expression score for this sample: '39.9537' Avg. expression score in LCM sample: '32.4677' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.36749 x 10-1 | 8 | 2 | 14 | 31 | 80.00% | 68.89% | 10 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.438537' Avg. expression score for this sample: '22.6307' Avg. expression score in LCM sample: '32.4677' Tissue used: 'full endosperm' |
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| AT4G16970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.85917 x 10-1 | 19 | 22 | 17 | 6 | 46.34% | 26.09% | 41 | 23 | TAIR8 |
Avg. embryo expression (dissected): '140.635' Avg. embryo expression (LCM): '98.6727' |
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| AT4G16970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.46362 x 10-1 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 70 | 28 | 71.43% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.18315 x 10-1 | 66 | 21 | 75.86% | 87 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 1 | 2 | 100.00% | 66.67% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.19935' Avg. expression score for this sample: '1.98223' Avg. expression score in LCM sample: '.470333' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.77157 x 10-1 | 15 | 2 | 1 | 3 | 88.24% | 75.00% | 17 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.19935' Avg. expression score for this sample: '10.176' Avg. expression score in LCM sample: '.470333' Tissue used: 'full endosperm' |
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| AT4G16960 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 4 | 0 | 0 | 50.00% | 8 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.13866' Avg. embryo expression (LCM): '2.00937' |
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| AT4G16960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G16960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16960 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G16950 | RPP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.89294 x 10-1 | 5 | 8 | 1 | 19 | 38.46% | 95.00% | 13 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.209961' Avg. expression score for this sample: '6.46229' Avg. expression score in LCM sample: '1.57268' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16950 | RPP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.46142 x 10-1 | 11 | 9 | 6 | 41 | 55.00% | 87.23% | 20 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.209961' Avg. expression score for this sample: '15.1449' Avg. expression score in LCM sample: '1.57268' Tissue used: 'full endosperm' |
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| AT4G16950 | RPP5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.70916 x 10-1 | 7 | 14 | 1 | 3 | 33.33% | 75.00% | 21 | 4 | TAIR8 |
Avg. embryo expression (dissected): '8.91366' Avg. embryo expression (LCM): '2.41125' |
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| AT4G16950 | RPP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.45289 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16950 | RPP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0993 x 10-2 | 38 | 29 | 56.72% | 67 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16950 | RPP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.4823 x 10-2 | 75 | 12 | 86.21% | 87 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G16940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.629525' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G16940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.76161' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |