Displaying data sets 54401 - 54500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G17585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.353466'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.226768'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G17580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G17580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17570 GATA26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.3561'
Avg. expression score in LCM sample: '15.5651'
Tissue used: 'pure endosperm, no chalazal'
AT4G17570 GATA26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.7529'
Avg. expression score in LCM sample: '15.5651'
Tissue used: 'full endosperm'
AT4G17570 GATA26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.4498'
Avg. embryo expression (LCM): '15.8489'
AT4G17570 GATA26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17570 GATA26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17570 GATA26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.25 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.455035'
Avg. expression score in LCM sample: '6.46708'
Tissue used: 'pure endosperm, no chalazal'
AT4G17565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.772044'
Avg. expression score in LCM sample: '6.46708'
Tissue used: 'full endosperm'
AT4G17565 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.58845'
Avg. embryo expression (LCM): '0'
AT4G17565 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17565 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17565 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 25 9 7 5 73.53% 41.67% 34 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '184.117'
Avg. expression score in LCM sample: '65.4351'
Tissue used: 'pure endosperm, no chalazal'
AT4G17560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 5 10 23 66.67% 69.70% 15 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '183.452'
Avg. expression score in LCM sample: '65.4351'
Tissue used: 'full endosperm'
AT4G17560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.62334 x 10-1 70 37 14 4 65.42% 22.22% 107 18 TAIR8 Avg. embryo expression (dissected): '730.827'
Avg. embryo expression (LCM): '707.5'
AT4G17560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.038 x 10-3 3 12 20.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.83 x 10-3 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17550 G3Pp4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 4 1 0 3 80.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584973'
Avg. expression score for this sample: '1676.81'
Avg. expression score in LCM sample: '1677.03'
Tissue used: 'pure endosperm, no chalazal'
AT4G17550 G3Pp4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 3 4 14 50.00% 77.78% 6 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584973'
Avg. expression score for this sample: '2278.55'
Avg. expression score in LCM sample: '1677.03'
Tissue used: 'full endosperm'
AT4G17550 G3Pp4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 2 6 0 1 25.00% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '2555.54'
Avg. embryo expression (LCM): '1763.56'
AT4G17550 G3Pp4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17550 G3Pp4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17314 x 10-1 26 16 61.90% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17550 G3Pp4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.05133 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.5948'
Avg. expression score in LCM sample: '18.9015'
Tissue used: 'pure endosperm, no chalazal'
AT4G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.1669'
Avg. expression score in LCM sample: '18.9015'
Tissue used: 'full endosperm'
AT4G17540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '45.7525'
Avg. embryo expression (LCM): '42.674'
AT4G17540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17530 RAB1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '103.58'
Avg. expression score in LCM sample: '26.1035'
Tissue used: 'pure endosperm, no chalazal'
AT4G17530 RAB1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '113.274'
Avg. expression score in LCM sample: '26.1035'
Tissue used: 'full endosperm'
AT4G17530 RAB1C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '40.2625'
Avg. embryo expression (LCM): '22.304'
AT4G17530 RAB1C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17530 RAB1C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17530 RAB1C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.86159 x 10-1 1171 644 537 1085 64.52% 66.89% 1815 1622 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009572'
Avg. expression score for this sample: '3747.8'
Avg. expression score in LCM sample: '767.995'
Tissue used: 'pure endosperm, no chalazal'
AT4G17520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3 x 10-6 1187 353 491 1023 77.08% 67.57% 1540 1514 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009572'
Avg. expression score for this sample: '2143.01'
Avg. expression score in LCM sample: '767.995'
Tissue used: 'full endosperm'
AT4G17520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.01874 x 10-1 1698 1859 488 525 47.74% 51.83% 3557 1013 TAIR8 Avg. embryo expression (dissected): '8623.88'
Avg. embryo expression (LCM): '5324.06'
AT4G17520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.74 x 10-4 437 138 76.00% 575 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.58516 x 10-1 1288 559 69.73% 1847 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1937 395 83.06% 2332 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17510 UCH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 1 1 66.67% 50.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.855759'
Avg. expression score for this sample: '30.6431'
Avg. expression score in LCM sample: '41.3011'
Tissue used: 'pure endosperm, no chalazal'
AT4G17510 UCH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 9 12 24 60.87% 66.67% 23 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.855759'
Avg. expression score for this sample: '66.7771'
Avg. expression score in LCM sample: '41.3011'
Tissue used: 'full endosperm'
AT4G17510 UCH3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 4 2 0 63.64% 0.00% 11 2 TAIR8 Avg. embryo expression (dissected): '32.8057'
Avg. embryo expression (LCM): '74.4849'
AT4G17510 UCH3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.52326 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17510 UCH3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.15764 x 10-1 19 9 67.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17510 UCH3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-5 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G17505 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G17505 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17505 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 42 20 67.74% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17505 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17500 ERF-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000163'
Avg. expression score for this sample: '4.33468'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17500 ERF-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.47 x 10-4 11 0 0 21 100.00% 100.00% 11 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000163'
Avg. expression score for this sample: '34.2923'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G17500 ERF-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '8.19888'
Avg. embryo expression (LCM): '1.23074'
AT4G17500 ERF-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.17391 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17500 ERF-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17500 ERF-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.57143 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17490 ERF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78551 x 10-1 13 10 1 3 56.52% 75.00% 23 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454886'
Avg. expression score for this sample: '17.9936'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17490 ERF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.96931 x 10-1 25 22 5 18 53.19% 78.26% 47 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454886'
Avg. expression score for this sample: '35.1436'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G17490 ERF6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.32 x 10-4 221 115 19 9 65.77% 32.14% 336 28 TAIR8 Avg. embryo expression (dissected): '304.905'
Avg. embryo expression (LCM): '8.42681'
AT4G17490 ERF6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17490 ERF6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.94 x 10-3 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17490 ERF6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.79 x 10-4 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17486 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 5 4 5 64.29% 55.56% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.27986'
Avg. expression score for this sample: '208.754'
Avg. expression score in LCM sample: '178.447'
Tissue used: 'pure endosperm, no chalazal'
AT4G17486 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3405 x 10-2 18 5 4 26 78.26% 86.67% 23 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.27986'
Avg. expression score for this sample: '342.272'
Avg. expression score in LCM sample: '178.447'
Tissue used: 'full endosperm'
AT4G17486 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77086 x 10-1 12 4 6 4 75.00% 40.00% 16 10 TAIR8 Avg. embryo expression (dissected): '377.517'
Avg. embryo expression (LCM): '249.074'
AT4G17486 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.37525 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17486 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.75992 x 10-1 142 47 75.13% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17486 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1374 x 10-2 39 27 59.09% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17483 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044825'
Avg. expression score for this sample: '10.87'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'pure endosperm, no chalazal'
AT4G17483 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9062 x 10-2 6 0 0 12 100.00% 100.00% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044825'
Avg. expression score for this sample: '30.4174'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'full endosperm'
AT4G17483 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.56761'
Avg. embryo expression (LCM): '1.35633'
AT4G17483 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17483 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.76814 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17483 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000169'
Avg. expression score for this sample: '18.5555'
Avg. expression score in LCM sample: '4.40937'
Tissue used: 'pure endosperm, no chalazal'
AT4G17480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.47 x 10-4 16 0 0 16 100.00% 100.00% 16 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000169'
Avg. expression score for this sample: '58.6802'
Avg. expression score in LCM sample: '4.40937'
Tissue used: 'full endosperm'
AT4G17480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.18809'
Avg. embryo expression (LCM): '4.70947'
AT4G17480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 42 1 97.67% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.154375'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G17470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G17470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G17460 HAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G17460 HAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.876527'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'