| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G418956 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.496918 x 10-1 | 16 | 12 | 15 | 21 | 57.14% | 58.33% | 28 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4496918' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G418956 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 4 | 0 | 100.00% | 0.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G418916 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22 x 10-25 | 232 | 37 | 204 | 42 | 86.25% | 17.07% | 269 | 246 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.34e-32' χ2 p-value for Mo17 x B73: '5.22e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G418916 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.40829 x 10-2 | 64 | 20 | 41 | 24 | 76.19% | 36.92% | 84 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0640829' χ2 p-value for Mo17 x B73: '3.64e-07' Biased in favor of strain: '' |
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| GRMZM2G418752 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.691714 x 10-1 | 18 | 13 | 4 | 7 | 58.06% | 63.64% | 31 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3691714' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G418752 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173106 x 10-1 | 20 | 4 | 4 | 14 | 83.33% | 77.78% | 24 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832676' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: '' |
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| GRMZM2G418689 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 3 | 6 | 1 | 83.33% | 14.29% | 18 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G418689 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 4 | 0 | 7 | 71.43% | 100.00% | 14 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
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| GRMZM2G418635 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 8 | 1 | 100.00% | 11.11% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM2G418635 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G418604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.924481 x 10-1 | 62 | 32 | 37 | 30 | 65.96% | 44.78% | 94 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001973' χ2 p-value for Mo17 x B73: '.3924481' Biased in favor of strain: '' |
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| GRMZM2G418604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518294 x 10-1 | 22 | 9 | 16 | 29 | 70.97% | 64.44% | 31 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6114703' χ2 p-value for Mo17 x B73: '.7518294' Biased in favor of strain: '' |
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| GRMZM2G418515 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.91214 x 10-2 | 638 | 557 | 595 | 485 | 53.39% | 44.91% | 1195 | 1080 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0191214' χ2 p-value for Mo17 x B73: '.0008163' Biased in favor of strain: 'B73' |
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| GRMZM2G418515 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.0423 x 10-3 | 276 | 101 | 145 | 198 | 73.21% | 57.73% | 377 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0070423' χ2 p-value for Mo17 x B73: '.0004438' Biased in favor of strain: 'B73' |
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| GRMZM2G418450 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 0 | 4 | 16.67% | 100.00% | 6 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G418450 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 1 | 5 | 0.00% | 83.33% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: '' |
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| GRMZM2G418294 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.388827 x 10-1 | 74 | 70 | 61 | 33 | 51.39% | 35.11% | 144 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0038773' Biased in favor of strain: '' |
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| GRMZM2G418294 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11181 x 10-2 | 25 | 3 | 34 | 33 | 89.29% | 49.25% | 28 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0111181' χ2 p-value for Mo17 x B73: '.0024984' Biased in favor of strain: '' |
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| GRMZM2G418263 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.43315 x 10-2 | 91 | 52 | 57 | 40 | 63.64% | 41.24% | 143 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011089' χ2 p-value for Mo17 x B73: '.0843315' Biased in favor of strain: '' |
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| GRMZM2G418263 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985536 x 10-1 | 21 | 9 | 44 | 52 | 70.00% | 54.17% | 30 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985536' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G418258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G418258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G418232 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.89 x 10-8 | 207 | 86 | 129 | 55 | 70.65% | 29.89% | 293 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.56e-12' χ2 p-value for Mo17 x B73: '4.89e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G418232 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.33 x 10-9 | 253 | 55 | 167 | 132 | 82.14% | 44.15% | 308 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.33e-09' χ2 p-value for Mo17 x B73: '1.45e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G418206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.473148 x 10-1 | 44 | 16 | 20 | 23 | 73.33% | 53.49% | 60 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003006' χ2 p-value for Mo17 x B73: '.6473148' Biased in favor of strain: '' |
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| GRMZM2G418206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.789226 x 10-1 | 52 | 33 | 35 | 58 | 61.18% | 62.37% | 85 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2829131' χ2 p-value for Mo17 x B73: '.3789226' Biased in favor of strain: '' |
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| GRMZM2G418160 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164123 x 10-1 | 106 | 52 | 80 | 72 | 67.09% | 47.37% | 158 | 152 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000174' χ2 p-value for Mo17 x B73: '.5164123' Biased in favor of strain: '' |
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| GRMZM2G418160 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.36115 x 10-2 | 9 | 31 | 12 | 49 | 22.50% | 80.33% | 40 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.11e-09' χ2 p-value for Mo17 x B73: '.0236115' Biased in favor of strain: '' |
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| GRMZM2G418037 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 1 | 3 | 0.00% | 75.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G418037 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G418004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 0 | 28 | 0 | 28 | 0.00% | 100.00% | 28 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G418004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 22 | 0.00% | 100.00% | 5 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| GRMZM2G417954 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 2 | 2 | 66.67% | 50.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G417954 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G417843 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.515151 x 10-1 | 161 | 138 | 136 | 146 | 53.85% | 51.77% | 299 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1834773' χ2 p-value for Mo17 x B73: '.5515151' Biased in favor of strain: '' |
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| GRMZM2G417843 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.09 x 10-5 | 1 | 111 | 95 | 300 | 0.89% | 75.95% | 112 | 395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0000909' Biased in favor of strain: 'Mo17' |
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| GRMZM2G417715 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.77796 x 10-2 | 12 | 2 | 8 | 2 | 85.71% | 20.00% | 14 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: '' |
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| GRMZM2G417715 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 5 | 5 | 0.00% | 50.00% | 2 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: '' |
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| GRMZM2G417682 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8599 x 10-3 | 21 | 1 | 16 | 3 | 95.45% | 15.79% | 22 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000201' χ2 p-value for Mo17 x B73: '.0028599' Biased in favor of strain: 'B73' |
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| GRMZM2G417682 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.710998 x 10-1 | 8 | 2 | 10 | 1 | 80.00% | 9.09% | 10 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.000051' Biased in favor of strain: '' |
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| GRMZM2G417658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.254998 x 10-1 | 232 | 186 | 181 | 153 | 55.50% | 45.81% | 418 | 334 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0244532' χ2 p-value for Mo17 x B73: '.1254998' Biased in favor of strain: '' |
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| GRMZM2G417658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.663536 x 10-1 | 105 | 54 | 109 | 118 | 66.04% | 51.98% | 159 | 227 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8663536' χ2 p-value for Mo17 x B73: '2.69e-06' Biased in favor of strain: '' |
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| GRMZM2G417594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G417594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G417563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9449 x 10-3 | 48 | 79 | 24 | 57 | 37.80% | 70.37% | 127 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0059449' χ2 p-value for Mo17 x B73: '.0002457' Biased in favor of strain: 'Mo17' |
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| GRMZM2G417563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 8 | 46 | 12 | 60 | 14.81% | 83.33% | 54 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.32e-16' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: 'Mo17' |
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| GRMZM2G417525 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G417525 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G417485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 0 | 14 | 0 | 10 | 0.00% | 100.00% | 14 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17' |
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| GRMZM2G417485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 4 | 0.00% | 100.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G417455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1196 | 379 | 1322 | 457 | 75.94% | 25.69% | 1575 | 1779 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G417455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.07 x 10-25 | 454 | 60 | 209 | 122 | 88.33% | 36.86% | 514 | 331 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.07e-25' χ2 p-value for Mo17 x B73: '1.25e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G417454 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733217 x 10-1 | 23 | 12 | 12 | 18 | 65.71% | 60.00% | 35 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.062979' χ2 p-value for Mo17 x B73: '.2733217' Biased in favor of strain: '' |
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| GRMZM2G417454 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 5 | 0 | 1 | 66.67% | 100.00% | 15 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999822' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G417402 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.789924 x 10-1 | 55 | 118 | 123 | 145 | 31.79% | 54.10% | 173 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.67e-06' χ2 p-value for Mo17 x B73: '.1789924' Biased in favor of strain: '' |
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| GRMZM2G417402 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.9145 x 10-3 | 70 | 154 | 160 | 233 | 31.25% | 59.29% | 224 | 393 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-29' χ2 p-value for Mo17 x B73: '.0019145' Biased in favor of strain: '' |
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| GRMZM2G417255 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 6 | 4 | 3 | 62.50% | 42.86% | 16 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G417255 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G417229 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.06 x 10-19 | 87 | 2 | 119 | 3 | 97.75% | 2.46% | 89 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.06e-19' χ2 p-value for Mo17 x B73: '8.44e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G417229 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G417125 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.63995 x 10-2 | 55 | 36 | 43 | 64 | 60.44% | 59.81% | 91 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0463995' χ2 p-value for Mo17 x B73: '.0423416' Biased in favor of strain: '' |
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| GRMZM2G417125 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.495735 x 10-1 | 101 | 36 | 42 | 67 | 73.72% | 61.47% | 137 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0797902' χ2 p-value for Mo17 x B73: '.2495735' Biased in favor of strain: '' |
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| GRMZM2G417089 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G417089 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G417072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53473 x 10-2 | 11 | 2 | 15 | 5 | 84.62% | 25.00% | 13 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: 'B73' |
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| GRMZM2G417072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.121 x 10-4 | 55 | 8 | 42 | 12 | 87.30% | 22.22% | 63 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005121' χ2 p-value for Mo17 x B73: '4.26e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G416965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G416965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G416887 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G416887 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 7 | 2 | 66.67% | 22.22% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G416836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 5 | 12 | 11 | 9 | 29.41% | 45.00% | 17 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0895551' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G416836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.353457 x 10-1 | 48 | 22 | 15 | 26 | 68.57% | 63.41% | 70 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7353457' χ2 p-value for Mo17 x B73: '.6586872' Biased in favor of strain: '' |
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| GRMZM2G416817 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 328 | 13 | 206 | 20 | 96.19% | 8.85% | 341 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.68e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G416817 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.81 x 10-9 | 162 | 20 | 73 | 54 | 89.01% | 42.52% | 182 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-10' χ2 p-value for Mo17 x B73: '7.81e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G416751 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.30537 x 10-2 | 331 | 200 | 225 | 182 | 62.34% | 44.72% | 531 | 407 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.31e-08' χ2 p-value for Mo17 x B73: '.0330537' Biased in favor of strain: 'B73' |
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| GRMZM2G416751 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.27 x 10-5 | 244 | 69 | 169 | 152 | 77.96% | 47.35% | 313 | 321 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000227' χ2 p-value for Mo17 x B73: '2.12e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G416750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.029176 x 10-1 | 57 | 53 | 47 | 30 | 51.82% | 38.96% | 110 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7029176' χ2 p-value for Mo17 x B73: '.052705' Biased in favor of strain: '' |
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| GRMZM2G416750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78971 x 10-1 | 59 | 21 | 112 | 49 | 73.75% | 30.43% | 80 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.178971' χ2 p-value for Mo17 x B73: '1.80e-22' Biased in favor of strain: '' |
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| GRMZM2G416701 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.211662 x 10-1 | 79 | 97 | 99 | 88 | 44.89% | 47.06% | 176 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1748444' χ2 p-value for Mo17 x B73: '.4211662' Biased in favor of strain: '' |
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| GRMZM2G416701 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.495749 x 10-1 | 9 | 13 | 7 | 21 | 40.91% | 75.00% | 22 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0103809' χ2 p-value for Mo17 x B73: '.3495749' Biased in favor of strain: '' |
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| GRMZM2G416684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.386245 x 10-1 | 110 | 107 | 98 | 109 | 50.69% | 52.66% | 217 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8386245' χ2 p-value for Mo17 x B73: '.4445378' Biased in favor of strain: '' |
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| GRMZM2G416684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.623 x 10-4 | 252 | 82 | 124 | 166 | 75.45% | 57.24% | 334 | 290 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006623' χ2 p-value for Mo17 x B73: '.000662' Biased in favor of strain: 'B73' |
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| GRMZM2G416677 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31 x 10-6 | 108 | 38 | 81 | 31 | 73.97% | 27.68% | 146 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.90e-09' χ2 p-value for Mo17 x B73: '2.31e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G416677 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.060476 x 10-1 | 38 | 11 | 28 | 20 | 77.55% | 41.67% | 49 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1060476' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: '' |
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| GRMZM2G416625 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-9 | 50 | 5 | 82 | 13 | 90.91% | 13.68% | 55 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-09' χ2 p-value for Mo17 x B73: '1.45e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G416625 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G416491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 0 | 100.00% | 0.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G416491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G416484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.333269 x 10-1 | 84 | 35 | 31 | 44 | 70.59% | 58.67% | 119 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.06e-06' χ2 p-value for Mo17 x B73: '.1333269' Biased in favor of strain: '' |
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| GRMZM2G416484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.903029 x 10-1 | 670 | 323 | 182 | 462 | 67.47% | 71.74% | 993 | 644 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5903029' χ2 p-value for Mo17 x B73: '.0063207' Biased in favor of strain: '' |
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| GRMZM2G416388 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.375877 x 10-1 | 363 | 239 | 300 | 295 | 60.30% | 49.58% | 602 | 595 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.33e-07' χ2 p-value for Mo17 x B73: '.8375877' Biased in favor of strain: '' |
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| GRMZM2G416388 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0795 x 10-3 | 602 | 242 | 201 | 290 | 71.33% | 59.06% | 844 | 491 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040795' χ2 p-value for Mo17 x B73: '.0003515' Biased in favor of strain: 'B73' |
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| GRMZM2G416386 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.56011 x 10-2 | 133 | 99 | 167 | 110 | 57.33% | 39.71% | 232 | 277 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0256011' χ2 p-value for Mo17 x B73: '.0006153' Biased in favor of strain: 'B73' |
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| GRMZM2G416386 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.857689 x 10-1 | 62 | 24 | 30 | 46 | 72.09% | 60.53% | 86 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2857689' χ2 p-value for Mo17 x B73: '.2561448' Biased in favor of strain: '' |
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| GRMZM2G416308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.785147 x 10-1 | 43 | 38 | 50 | 42 | 53.09% | 45.65% | 81 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5785147' χ2 p-value for Mo17 x B73: '.4042485' Biased in favor of strain: '' |
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| GRMZM2G416308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999995 x 10-1 | 58 | 29 | 38 | 76 | 66.67% | 66.67% | 87 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999957' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: '' |
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| GRMZM2G416216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01368 x 10-2 | 54 | 28 | 39 | 21 | 65.85% | 35.00% | 82 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040889' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: 'B73' |
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| GRMZM2G416216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 9 | 0 | 100.00% | 0.00% | 4 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM2G416184 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.96 x 10-16 | 333 | 151 | 303 | 135 | 68.80% | 30.82% | 484 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.31e-16' χ2 p-value for Mo17 x B73: '9.96e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G416184 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.77 x 10-5 | 212 | 29 | 64 | 65 | 87.97% | 50.39% | 241 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.31e-12' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: 'B73' |