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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G18830 OFP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18830 OFP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18823 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18823 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18823 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18823 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18823 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18823 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8 x 10-8 413 138 375 235 74.95% 38.52% 551 610 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000012'
Avg. expression score for this sample: '590.796'
Avg. expression score in LCM sample: '145.803'
Tissue used: 'pure endosperm, no chalazal'
AT4G18820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6527 x 10-2 945 398 631 925 70.36% 59.45% 1343 1556 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000012'
Avg. expression score for this sample: '869.194'
Avg. expression score in LCM sample: '145.803'
Tissue used: 'full endosperm'
AT4G18820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0 x 10-5 671 327 280 148 67.23% 34.58% 998 428 TAIR8 Avg. embryo expression (dissected): '1123.1'
Avg. embryo expression (LCM): '731.035'
AT4G18820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.12867 x 10-1 132 63 67.69% 195 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.055 x 10-3 38 48 44.19% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.228 x 10-3 225 95 70.31% 320 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18815 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18815 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18815 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18815 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18815 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18815 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.77617 x 10-1 6 3 0 5 66.67% 100.00% 9 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.900038'
Avg. expression score for this sample: '63.5289'
Avg. expression score in LCM sample: '25.0599'
Tissue used: 'pure endosperm, no chalazal'
AT4G18810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 44 30 13 43 59.46% 76.79% 74 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.900038'
Avg. expression score for this sample: '132.423'
Avg. expression score in LCM sample: '25.0599'
Tissue used: 'full endosperm'
AT4G18810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 15 0 5 34.78% 100.00% 23 5 TAIR8 Avg. embryo expression (dissected): '130.528'
Avg. embryo expression (LCM): '68.0173'
AT4G18810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4171 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.35907 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18800 RABA1d endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.95031 x 10-1 42 88 15 152 32.31% 91.02% 130 167 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054332'
Avg. expression score for this sample: '104.966'
Avg. expression score in LCM sample: '52.4422'
Tissue used: 'pure endosperm, no chalazal'
AT4G18800 RABA1d endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.733 x 10-3 95 126 50 388 42.99% 88.58% 221 438 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054332'
Avg. expression score for this sample: '146.025'
Avg. expression score in LCM sample: '52.4422'
Tissue used: 'full endosperm'
AT4G18800 RABA1d embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.315 x 10-3 41 129 17 41 24.12% 70.69% 170 58 TAIR8 Avg. embryo expression (dissected): '134.178'
Avg. embryo expression (LCM): '237.181'
AT4G18800 RABA1d endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3 x 10-6 89 9 90.82% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18800 RABA1d endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7 x 10-17 510 64 88.85% 574 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18800 RABA1d endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5251 x 10-2 209 63 76.84% 272 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18790 NRAMP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.163943'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18790 NRAMP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.884849'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18790 NRAMP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18790 NRAMP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18790 NRAMP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.28571 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18790 NRAMP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18780 IRX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2 x 10-5 19 0 2 42 100.00% 95.45% 19 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.48365'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'pure endosperm, no chalazal'
AT4G18780 IRX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 190 0 3 220 100.00% 98.65% 190 223 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.5452'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'full endosperm'
AT4G18780 IRX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.45967'
Avg. embryo expression (LCM): '0'
AT4G18780 IRX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.32516 x 10-1 32 1 96.97% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18780 IRX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.98913 x 10-1 632 3 99.53% 635 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18780 IRX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 50 0 100.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18770 MYB98 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.274828'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18770 MYB98 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.484802'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18770 MYB98 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18770 MYB98 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18770 MYB98 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18770 MYB98 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18760 RLP51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.04917 x 10-1 13 6 17 25 68.42% 59.52% 19 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.914151'
Avg. expression score for this sample: '600.989'
Avg. expression score in LCM sample: '267.855'
Tissue used: 'pure endosperm, no chalazal'
AT4G18760 RLP51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 47 29 14 41 61.84% 74.55% 76 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.914151'
Avg. expression score for this sample: '206.245'
Avg. expression score in LCM sample: '267.855'
Tissue used: 'full endosperm'
AT4G18760 RLP51 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1593 x 10-1 9 12 6 4 42.86% 40.00% 21 10 TAIR8 Avg. embryo expression (dissected): '489'
Avg. embryo expression (LCM): '115.401'
AT4G18760 RLP51 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.87761 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18760 RLP51 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1576 x 10-2 33 5 86.84% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18760 RLP51 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.07 x 10-4 31 1 96.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18750 DOT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 4 4 2 1 50.00% 33.33% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.0098'
Avg. expression score in LCM sample: '10.2738'
Tissue used: 'pure endosperm, no chalazal'
AT4G18750 DOT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 1 1 2 83.33% 66.67% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.6912'
Avg. expression score in LCM sample: '10.2738'
Tissue used: 'full endosperm'
AT4G18750 DOT4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 10 2 1 47.37% 33.33% 19 3 TAIR8 Avg. embryo expression (dissected): '76.1909'
Avg. embryo expression (LCM): '90.4971'
AT4G18750 DOT4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18750 DOT4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.65503 x 10-1 24 11 68.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18750 DOT4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1637 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.82779'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.15329'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '7.52565'
Avg. embryo expression (LCM): '1.36888'
AT4G18740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18730 RPL16B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.4 x 10-5 352 414 142 438 45.95% 75.52% 766 580 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037232'
Avg. expression score for this sample: '486.638'
Avg. expression score in LCM sample: '157.15'
Tissue used: 'pure endosperm, no chalazal'
AT4G18730 RPL16B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.43931 x 10-1 347 259 215 695 57.26% 76.37% 606 910 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037232'
Avg. expression score for this sample: '398.688'
Avg. expression score in LCM sample: '157.15'
Tissue used: 'full endosperm'
AT4G18730 RPL16B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5 x 10-7 719 1149 117 199 38.49% 62.97% 1868 316 TAIR8 Avg. embryo expression (dissected): '1088.26'
Avg. embryo expression (LCM): '1311.15'
AT4G18730 RPL16B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9983 x 10-2 192 81 70.33% 273 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18730 RPL16B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1056 168 86.27% 1224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18730 RPL16B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-5 628 243 72.10% 871 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18725 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18725 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18725 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18725 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '1.29391'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.37186 x 10-1 2 1 4 2 66.67% 33.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '4.61714'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0941 x 10-2 27 4 87.10% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18710 BIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.0281 x 10-1 60 18 28 40 76.92% 58.82% 78 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.241299'
Avg. expression score for this sample: '81.1626'
Avg. expression score in LCM sample: '93.9785'
Tissue used: 'pure endosperm, no chalazal'
AT4G18710 BIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.52535 x 10-1 190 35 82 93 84.44% 53.14% 225 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.241299'
Avg. expression score for this sample: '141.166'
Avg. expression score in LCM sample: '93.9785'
Tissue used: 'full endosperm'
AT4G18710 BIN2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.92506 x 10-1 43 19 18 9 69.35% 33.33% 62 27 TAIR8 Avg. embryo expression (dissected): '87.2517'
Avg. embryo expression (LCM): '45.7886'
AT4G18710 BIN2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0844 x 10-2 30 23 56.60% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18710 BIN2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-5 58 4 93.55% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18710 BIN2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-30 321 5 98.47% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18700 CIPK12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.35251 x 10-1 2233 1008 1375 2472 68.90% 64.26% 3241 3847 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053894'
Avg. expression score for this sample: '1221.69'
Avg. expression score in LCM sample: '714.128'
Tissue used: 'pure endosperm, no chalazal'
AT4G18700 CIPK12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1061 x 10-2 3944 1864 2283 3873 67.91% 62.91% 5808 6156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053894'
Avg. expression score for this sample: '1365.41'
Avg. expression score in LCM sample: '714.128'
Tissue used: 'full endosperm'
AT4G18700 CIPK12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.737 x 10-3 1107 1389 398 460 44.35% 53.61% 2496 858 TAIR8 Avg. embryo expression (dissected): '903.725'
Avg. embryo expression (LCM): '584.476'
AT4G18700 CIPK12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.81737 x 10-1 455 216 67.81% 671 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18700 CIPK12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8 x 10-6 1957 838 70.02% 2795 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18700 CIPK12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2157 x 10-2 1618 750 68.33% 2368 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18692 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '87.1874'
Avg. expression score in LCM sample: '16.5792'
Tissue used: 'pure endosperm, no chalazal'
AT4G18692 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.8554'
Avg. expression score in LCM sample: '16.5792'
Tissue used: 'full endosperm'