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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G19095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.63984'
Avg. embryo expression (LCM): '8.60262'
AT4G19095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 3 1 4 2 75.00% 33.33% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '6.54746'
Avg. expression score in LCM sample: '10.4502'
Tissue used: 'pure endosperm, no chalazal'
AT4G19090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.81504 x 10-1 13 1 11 3 92.86% 21.43% 14 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '12.3821'
Avg. expression score in LCM sample: '10.4502'
Tissue used: 'full endosperm'
AT4G19090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40867 x 10-1 9 0 1 0 100.00% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '10.5397'
Avg. embryo expression (LCM): '6.69372'
AT4G19090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.14437 x 10-1 5 7 41.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-5 28 0 100.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '30.4998'
Avg. expression score in LCM sample: '16.447'
Tissue used: 'pure endosperm, no chalazal'
AT4G19080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.5662'
Avg. expression score in LCM sample: '16.447'
Tissue used: 'full endosperm'
AT4G19080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '56.6307'
Avg. embryo expression (LCM): '22.9948'
AT4G19080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '166.582'
Avg. expression score in LCM sample: '36.2892'
Tissue used: 'pure endosperm, no chalazal'
AT4G19070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '92.887'
Avg. expression score in LCM sample: '36.2892'
Tissue used: 'full endosperm'
AT4G19070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '215.205'
Avg. embryo expression (LCM): '79.9102'
AT4G19070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.72'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'pure endosperm, no chalazal'
AT4G19060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.0278'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'full endosperm'
AT4G19060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '55.6597'
Avg. embryo expression (LCM): '29.9396'
AT4G19060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.41176 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487607'
Avg. expression score for this sample: '2.33455'
Avg. expression score in LCM sample: '2.43985'
Tissue used: 'pure endosperm, no chalazal'
AT4G19050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.13982 x 10-1 7 2 2 8 77.78% 80.00% 9 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487607'
Avg. expression score for this sample: '10.4451'
Avg. expression score in LCM sample: '2.43985'
Tissue used: 'full endosperm'
AT4G19050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.80972'
Avg. embryo expression (LCM): '5.07367'
AT4G19050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.46467 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19040 EDR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0055 413 77 84.29% 490 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19040 EDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.69478 x 10-1 64 27 26 69 70.33% 72.63% 91 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.4e-06'
Avg. expression score for this sample: '57.8659'
Avg. expression score in LCM sample: '51.6632'
Tissue used: 'pure endosperm, no chalazal'
AT4G19040 EDR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1 x 10-6 175 38 59 213 82.16% 78.31% 213 272 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.4e-06'
Avg. expression score for this sample: '78.914'
Avg. expression score in LCM sample: '51.6632'
Tissue used: 'full endosperm'
AT4G19040 EDR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.39983 x 10-1 43 51 16 11 45.74% 40.74% 94 27 TAIR8 Avg. embryo expression (dissected): '52.9588'
Avg. embryo expression (LCM): '27.7042'
AT4G19040 EDR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.40414 x 10-1 31 6 83.78% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19040 EDR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.57412 x 10-1 435 146 74.87% 581 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19038 LCR15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.305 x 10-3 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19038 LCR15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 4 1 100.00% 20.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.52152'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'pure endosperm, no chalazal'
AT4G19038 LCR15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'full endosperm'
AT4G19038 LCR15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19038 LCR15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19038 LCR15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 12 53.85% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19035 LCR7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 139 67 67.48% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19035 LCR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 7 10 80.00% 58.82% 5 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '49.2945'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'pure endosperm, no chalazal'
AT4G19035 LCR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.96943'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'full endosperm'
AT4G19035 LCR7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19035 LCR7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19035 LCR7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 119 65 64.67% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19030 NLM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19030 NLM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19030 NLM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.143212'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19030 NLM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.12566'
Avg. embryo expression (LCM): '0'
AT4G19030 NLM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19030 NLM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19020 CMT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-21 862 220 79.67% 1082 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19020 CMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.84091 x 10-1 689 237 324 447 74.41% 57.98% 926 771 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12964'
Avg. expression score for this sample: '161.646'
Avg. expression score in LCM sample: '92.347'
Tissue used: 'pure endosperm, no chalazal'
AT4G19020 CMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.514 x 10-2 1590 435 999 1030 78.52% 50.76% 2025 2029 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12964'
Avg. expression score for this sample: '275.531'
Avg. expression score in LCM sample: '92.347'
Tissue used: 'full endosperm'
AT4G19020 CMT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.8 x 10-7 1221 627 479 260 66.07% 35.18% 1848 739 TAIR8 Avg. embryo expression (dissected): '391.838'
Avg. embryo expression (LCM): '220.943'
AT4G19020 CMT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9 x 10-5 162 138 54.00% 300 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19020 CMT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-9 889 674 56.88% 1563 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.33148 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.99544'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'pure endosperm, no chalazal'
AT4G19010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 4 2 6 50.00% 75.00% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.09111'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'full endosperm'
AT4G19010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '5.50675'
Avg. embryo expression (LCM): '6.44255'
AT4G19010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19006 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-19 728 111 86.77% 839 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.73724 x 10-1 414 177 189 413 70.05% 68.60% 591 602 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001926'
Avg. expression score for this sample: '413.545'
Avg. expression score in LCM sample: '133.81'
Tissue used: 'pure endosperm, no chalazal'
AT4G19006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1 x 10-4 223 77 83 267 74.33% 76.29% 300 350 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001926'
Avg. expression score for this sample: '244.543'
Avg. expression score in LCM sample: '133.81'
Tissue used: 'full endosperm'
AT4G19006 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.28819 x 10-1 375 348 69 63 51.87% 47.73% 723 132 TAIR8 Avg. embryo expression (dissected): '397.352'
Avg. embryo expression (LCM): '227.787'
AT4G19006 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 69 27 71.88% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19006 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.59135 x 10-1 538 239 69.24% 777 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19003 VPS25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-6 145 5 96.67% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19003 VPS25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.89585 x 10-1 16 5 3 10 76.19% 76.92% 21 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047517'
Avg. expression score for this sample: '29.6521'
Avg. expression score in LCM sample: '7.58412'
Tissue used: 'pure endosperm, no chalazal'
AT4G19003 VPS25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9181 x 10-2 32 7 12 41 82.05% 77.36% 39 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047517'
Avg. expression score for this sample: '63.1299'
Avg. expression score in LCM sample: '7.58412'
Tissue used: 'full endosperm'
AT4G19003 VPS25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.00481 x 10-1 22 13 3 2 62.86% 40.00% 35 5 TAIR8 Avg. embryo expression (dissected): '37.4418'
Avg. embryo expression (LCM): '45.3741'
AT4G19003 VPS25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.29006 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19003 VPS25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 76 21 78.35% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19000 IWS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 20 2 90.91% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19000 IWS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073755'
Avg. expression score for this sample: '1.91441'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'pure endosperm, no chalazal'
AT4G19000 IWS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.30014 x 10-1 2 1 1 17 66.67% 94.44% 3 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073755'
Avg. expression score for this sample: '7.47826'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'full endosperm'
AT4G19000 IWS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.33064'
Avg. embryo expression (LCM): '2.07217'
AT4G19000 IWS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19000 IWS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8832 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18990 XTH29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18990 XTH29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '.709822'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18990 XTH29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 5.82043 x 10-1 0 0 1 9 90.00% 0 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '7.15953'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18990 XTH29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18990 XTH29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18990 XTH29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.23077 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18980 AtS40-3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18980 AtS40-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.431674'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G18980 AtS40-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.25759'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G18980 AtS40-3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G18980 AtS40-3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G18980 AtS40-3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'