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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G19740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.895772'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.19181'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19710 AK-HSDH II endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.57818 x 10-1 28 13 9 21 68.29% 70.00% 41 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.817905'
Avg. expression score for this sample: '73.3132'
Avg. expression score in LCM sample: '32.4383'
Tissue used: 'pure endosperm, no chalazal'
AT4G19710 AK-HSDH II endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.47575 x 10-1 23 20 17 36 53.49% 67.92% 43 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.817905'
Avg. expression score for this sample: '101.74'
Avg. expression score in LCM sample: '32.4383'
Tissue used: 'full endosperm'
AT4G19710 AK-HSDH II embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.88723 x 10-1 50 69 13 9 42.02% 40.91% 119 22 TAIR8 Avg. embryo expression (dissected): '218.994'
Avg. embryo expression (LCM): '245.784'
AT4G19710 AK-HSDH II endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.00801 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19710 AK-HSDH II endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.15 x 10-4 48 6 88.89% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19710 AK-HSDH II endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.171 x 10-3 36 5 87.80% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19700 RING endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.58 x 10-4 721 193 196 318 78.88% 61.87% 914 514 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-07'
Avg. expression score for this sample: '346.461'
Avg. expression score in LCM sample: '88.9959'
Tissue used: 'pure endosperm, no chalazal'
AT4G19700 RING endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.05 x 10-4 138 21 56 161 86.79% 74.19% 159 217 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-07'
Avg. expression score for this sample: '67.0716'
Avg. expression score in LCM sample: '88.9959'
Tissue used: 'full endosperm'
AT4G19700 RING embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.80166 x 10-1 668 612 129 135 52.19% 51.14% 1280 264 TAIR8 Avg. embryo expression (dissected): '526.856'
Avg. embryo expression (LCM): '161.591'
AT4G19700 RING endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.65161 x 10-1 65 17 79.27% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19700 RING endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.3 x 10-8 566 105 84.35% 671 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19700 RING endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.02 x 10-4 213 41 83.86% 254 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19690 IRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19690 IRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19690 IRT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19690 IRT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19690 IRT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19690 IRT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19680 IRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19680 IRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19680 IRT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19680 IRT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19680 IRT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19680 IRT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 30 15 16 32 66.67% 66.67% 45 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '162.741'
Avg. expression score in LCM sample: '54.0001'
Tissue used: 'pure endosperm, no chalazal'
AT4G19670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2 x 10-7 159 25 58 201 86.41% 77.61% 184 259 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '259.363'
Avg. expression score in LCM sample: '54.0001'
Tissue used: 'full endosperm'
AT4G19670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2533 x 10-1 14 14 8 5 50.00% 38.46% 28 13 TAIR8 Avg. embryo expression (dissected): '91.8124'
Avg. embryo expression (LCM): '56.3127'
AT4G19670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.32662 x 10-1 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.36 x 10-4 80 4 95.24% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-7 195 14 93.30% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19660 NPR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.49447 x 10-1 9 1 5 8 90.00% 61.54% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604047'
Avg. expression score for this sample: '25.5235'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'pure endosperm, no chalazal'
AT4G19660 NPR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.83814 x 10-1 17 5 11 23 77.27% 67.65% 22 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604047'
Avg. expression score for this sample: '39.2642'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'full endosperm'
AT4G19660 NPR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 7 2 5 41.67% 71.43% 12 7 TAIR8 Avg. embryo expression (dissected): '35.9841'
Avg. embryo expression (LCM): '27.7293'
AT4G19660 NPR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.89815 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19660 NPR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7889 x 10-2 31 4 88.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19660 NPR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.79 x 10-4 54 2 96.43% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259636'
Avg. expression score for this sample: '27.3873'
Avg. expression score in LCM sample: '24.0752'
Tissue used: 'pure endosperm, no chalazal'
AT4G19650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.65322 x 10-1 12 1 2 8 92.31% 80.00% 13 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259636'
Avg. expression score for this sample: '60.211'
Avg. expression score in LCM sample: '24.0752'
Tissue used: 'full endosperm'
AT4G19650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '27.1801'
Avg. embryo expression (LCM): '36.6962'
AT4G19650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.32704 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2576 x 10-2 12 11 52.17% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '215.8'
Avg. expression score in LCM sample: '139.322'
Tissue used: 'pure endosperm, no chalazal'
AT4G19645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '354.78'
Avg. expression score in LCM sample: '139.322'
Tissue used: 'full endosperm'
AT4G19645 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.3088'
Avg. embryo expression (LCM): '2.38613'
AT4G19645 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19645 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19645 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19640 ARA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.55877 x 10-1 104 31 52 113 77.04% 68.48% 135 165 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-13'
Avg. expression score for this sample: '861.443'
Avg. expression score in LCM sample: '164.925'
Tissue used: 'pure endosperm, no chalazal'
AT4G19640 ARA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-14 315 50 73 313 86.30% 81.09% 365 386 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-13'
Avg. expression score for this sample: '868.775'
Avg. expression score in LCM sample: '164.925'
Tissue used: 'full endosperm'
AT4G19640 ARA7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.85961 x 10-1 59 43 5 6 57.84% 54.55% 102 11 TAIR8 Avg. embryo expression (dissected): '378.592'
Avg. embryo expression (LCM): '209.515'
AT4G19640 ARA7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.59372 x 10-1 93 15 86.11% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19640 ARA7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.92269 x 10-1 307 67 82.09% 374 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19640 ARA7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-16 489 26 94.95% 515 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 17 0 2 0 100.00% 0.00% 17 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346815'
Avg. expression score for this sample: '13.3821'
Avg. expression score in LCM sample: '15.7562'
Tissue used: 'pure endosperm, no chalazal'
AT4G19630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 29 7 8 5 80.56% 38.46% 36 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346815'
Avg. expression score for this sample: '25.5376'
Avg. expression score in LCM sample: '15.7562'
Tissue used: 'full endosperm'
AT4G19630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '1.77838'
Avg. embryo expression (LCM): '7.69841'
AT4G19630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6087 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-17 1 51 1.92% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-9 129 0 100.00% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.491555'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G19620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G19620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.62137 x 10-1 3 3 5 4 50.00% 44.44% 6 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.091988'
Avg. expression score for this sample: '114.429'
Avg. expression score in LCM sample: '36.2598'
Tissue used: 'pure endosperm, no chalazal'
AT4G19610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1258 x 10-2 37 7 14 52 84.09% 78.79% 44 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.091988'
Avg. expression score for this sample: '118.629'
Avg. expression score in LCM sample: '36.2598'
Tissue used: 'full endosperm'
AT4G19610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 2 3 50.00% 60.00% 16 5 TAIR8 Avg. embryo expression (dissected): '211.241'
Avg. embryo expression (LCM): '171.312'
AT4G19610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.66633 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 53 15 77.94% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.72857 x 10-1 62 13 82.67% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19600 CYCT1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4087 x 10-1 112 73 46 146 60.54% 76.04% 185 192 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000257'
Avg. expression score for this sample: '304.634'
Avg. expression score in LCM sample: '105.663'
Tissue used: 'pure endosperm, no chalazal'
AT4G19600 CYCT1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4 x 10-5 232 76 123 394 75.32% 76.21% 308 517 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000257'
Avg. expression score for this sample: '345.355'
Avg. expression score in LCM sample: '105.663'
Tissue used: 'full endosperm'
AT4G19600 CYCT1;4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.78566 x 10-1 77 104 32 33 42.54% 50.77% 181 65 TAIR8 Avg. embryo expression (dissected): '332.736'
Avg. embryo expression (LCM): '278.26'
AT4G19600 CYCT1;4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.15674 x 10-1 31 9 77.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19600 CYCT1;4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.22095 x 10-1 242 82 74.69% 324 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19600 CYCT1;4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9295 x 10-2 233 59 79.79% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 4 3 10 60.00% 76.92% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '99.1463'
Avg. expression score in LCM sample: '15.6092'
Tissue used: 'pure endosperm, no chalazal'
AT4G19590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 10 11 25 64.29% 69.44% 28 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '143.613'
Avg. expression score in LCM sample: '15.6092'
Tissue used: 'full endosperm'
AT4G19590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.14837 x 10-1 23 28 4 4 45.10% 50.00% 51 8 TAIR8 Avg. embryo expression (dissected): '410.073'
Avg. embryo expression (LCM): '269.118'
AT4G19590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0135 x 10-2 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.76482 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.94835 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G19580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '1.43791'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G19580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 1 0 0 4 100.00% 100.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.955971'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'