| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G421415 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 91 | 80 | 122 | 118 | 53.22% | 49.17% | 171 | 240 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4002409' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
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| GRMZM2G421415 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.455863 x 10-1 | 12 | 7 | 7 | 22 | 63.16% | 75.86% | 19 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7455863' χ2 p-value for Mo17 x B73: '.2935107' Biased in favor of strain: '' |
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| GRMZM2G421279 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 8042 | 2627 | 8917 | 3756 | 75.38% | 29.64% | 10669 | 12673 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G421279 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1213 | 193 | 932 | 761 | 86.27% | 44.95% | 1406 | 1693 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G421256 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.87 x 10-6 | 76 | 27 | 100 | 43 | 73.79% | 30.07% | 103 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.38e-06' χ2 p-value for Mo17 x B73: '1.87e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G421256 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.242563 x 10-1 | 171 | 70 | 73 | 122 | 70.95% | 62.56% | 241 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1579669' χ2 p-value for Mo17 x B73: '.2242563' Biased in favor of strain: '' |
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| GRMZM2G421240 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.19 x 10-15 | 246 | 100 | 259 | 108 | 71.10% | 29.43% | 346 | 367 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.19e-15' χ2 p-value for Mo17 x B73: '3.22e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G421240 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.05 x 10-5 | 321 | 100 | 230 | 210 | 76.25% | 47.73% | 421 | 440 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000305' χ2 p-value for Mo17 x B73: '3.53e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G421231 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.559216 x 10-1 | 82 | 90 | 135 | 138 | 47.67% | 50.55% | 172 | 273 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5418656' χ2 p-value for Mo17 x B73: '.8559216' Biased in favor of strain: '' |
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| GRMZM2G421231 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.192824 x 10-1 | 37 | 24 | 36 | 53 | 60.66% | 59.55% | 61 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3192824' χ2 p-value for Mo17 x B73: '.1544144' Biased in favor of strain: '' |
||||
| GRMZM2G421212 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.315 x 10-4 | 107 | 54 | 93 | 53 | 66.46% | 36.30% | 161 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000295' χ2 p-value for Mo17 x B73: '.0009315' Biased in favor of strain: 'B73' |
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| GRMZM2G421212 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.07 x 10-5 | 175 | 45 | 65 | 50 | 79.55% | 43.48% | 220 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000507' χ2 p-value for Mo17 x B73: '1.33e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G421126 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 12 | 0 | 11 | 0.00% | 100.00% | 12 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM2G421126 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G421033 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.668543 x 10-1 | 83 | 61 | 81 | 72 | 57.64% | 47.06% | 144 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.066753' χ2 p-value for Mo17 x B73: '.4668543' Biased in favor of strain: '' |
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| GRMZM2G421033 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.78 x 10-5 | 184 | 49 | 109 | 96 | 78.97% | 46.83% | 233 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000678' χ2 p-value for Mo17 x B73: '1.69e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G420926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.63581 x 10-2 | 355 | 285 | 287 | 239 | 55.47% | 45.44% | 640 | 526 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0056576' χ2 p-value for Mo17 x B73: '.0363581' Biased in favor of strain: 'B73' |
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| GRMZM2G420926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.24 x 10-6 | 427 | 66 | 228 | 307 | 86.61% | 57.38% | 493 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.74e-21' χ2 p-value for Mo17 x B73: '5.24e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G420910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 26 | 13 | 8 | 9 | 66.67% | 52.94% | 39 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.037373' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
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| GRMZM2G420910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.271577 x 10-1 | 21 | 5 | 15 | 15 | 80.77% | 50.00% | 26 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1271577' χ2 p-value for Mo17 x B73: '.0528075' Biased in favor of strain: '' |
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| GRMZM2G420883 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4598 x 10-3 | 563 | 288 | 313 | 244 | 66.16% | 43.81% | 851 | 557 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.22e-21' χ2 p-value for Mo17 x B73: '.0034598' Biased in favor of strain: 'B73' |
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| GRMZM2G420883 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.270289 x 10-1 | 279 | 118 | 629 | 913 | 70.28% | 59.21% | 397 | 1542 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1270289' χ2 p-value for Mo17 x B73: '5.22e-10' Biased in favor of strain: '' |
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| GRMZM2G420882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.5263 x 10-3 | 2 | 16 | 2 | 12 | 11.11% | 85.71% | 18 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009674' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: 'Mo17' |
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| GRMZM2G420882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G420865 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 3 | 3 | 66.67% | 50.00% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G420865 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 4 | 3 | 83.33% | 42.86% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: '' |
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| GRMZM2G420823 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.78126 x 10-2 | 399 | 332 | 276 | 327 | 54.58% | 54.23% | 731 | 603 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.013209' χ2 p-value for Mo17 x B73: '.0378126' Biased in favor of strain: '' |
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| GRMZM2G420823 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.496797 x 10-1 | 8 | 6 | 1 | 15 | 57.14% | 93.75% | 14 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4496797' χ2 p-value for Mo17 x B73: '.0215563' Biased in favor of strain: '' |
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| GRMZM2G420812 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G420812 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170752 x 10-1 | 15 | 2 | 5 | 13 | 88.24% | 72.22% | 17 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0592315' χ2 p-value for Mo17 x B73: '.6170752' Biased in favor of strain: '' |
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| GRMZM2G420789 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G420789 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G420743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.485063 x 10-1 | 10 | 5 | 14 | 11 | 66.67% | 44.00% | 15 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: '' |
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| GRMZM2G420743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.90169 x 10-2 | 11 | 0 | 0 | 11 | 100.00% | 100.00% | 11 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G420733 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.680826 x 10-1 | 20 | 27 | 22 | 24 | 42.55% | 52.17% | 47 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3072284' χ2 p-value for Mo17 x B73: '.7680826' Biased in favor of strain: '' |
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| GRMZM2G420733 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G420723 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.170439 x 10-1 | 25 | 17 | 23 | 11 | 59.52% | 32.35% | 42 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2170439' χ2 p-value for Mo17 x B73: '.0395918' Biased in favor of strain: '' |
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| GRMZM2G420723 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 4 | 2 | 4 | 71.43% | 66.67% | 14 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G420715 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.126908 x 10-1 | 47 | 20 | 12 | 9 | 70.15% | 42.86% | 67 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009718' χ2 p-value for Mo17 x B73: '.5126908' Biased in favor of strain: '' |
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| GRMZM2G420715 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G420684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9132 x 10-3 | 19 | 53 | 41 | 70 | 26.39% | 63.06% | 72 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000615' χ2 p-value for Mo17 x B73: '.0059132' Biased in favor of strain: 'Mo17' |
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| GRMZM2G420684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937685 x 10-1 | 14 | 1 | 5 | 6 | 93.33% | 54.55% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284605' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: '' |
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| GRMZM2G420469 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.179817 x 10-1 | 54 | 38 | 33 | 36 | 58.70% | 52.17% | 92 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0952928' χ2 p-value for Mo17 x B73: '.7179817' Biased in favor of strain: '' |
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| GRMZM2G420469 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.230394 x 10-1 | 26 | 14 | 18 | 33 | 65.00% | 64.71% | 40 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8230394' χ2 p-value for Mo17 x B73: '.7664325' Biased in favor of strain: '' |
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| GRMZM2G420436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.18 x 10-8 | 161 | 77 | 158 | 74 | 67.65% | 31.90% | 238 | 232 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.18e-08' χ2 p-value for Mo17 x B73: '3.49e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G420436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0278 x 10-2 | 47 | 11 | 22 | 4 | 81.03% | 15.38% | 58 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.020278' χ2 p-value for Mo17 x B73: '2.91e-08' Biased in favor of strain: '' |
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| GRMZM2G420432 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.413007 x 10-1 | 36 | 31 | 27 | 39 | 53.73% | 59.09% | 67 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5413007' χ2 p-value for Mo17 x B73: '.1396494' Biased in favor of strain: '' |
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| GRMZM2G420432 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 9 | 8 | 83.33% | 47.06% | 6 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0863478' Biased in favor of strain: '' |
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| GRMZM2G420407 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 1 | 50.00% | 50.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G420407 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G420357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.055406 x 10-1 | 32 | 34 | 21 | 27 | 48.48% | 56.25% | 66 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8055406' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G420357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.376598 x 10-1 | 78 | 29 | 31 | 52 | 72.90% | 62.65% | 107 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1715854' χ2 p-value for Mo17 x B73: '.4376598' Biased in favor of strain: '' |
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| GRMZM2G420334 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 8 | 11 | 7 | 11 | 42.11% | 61.11% | 19 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4912971' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: '' |
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| GRMZM2G420334 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 11 | 6 | 55.56% | 35.29% | 9 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794898' χ2 p-value for Mo17 x B73: '.00607' Biased in favor of strain: '' |
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| GRMZM2G420121 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.27 x 10-5 | 472 | 225 | 281 | 192 | 67.72% | 40.59% | 697 | 473 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.30e-21' χ2 p-value for Mo17 x B73: '.0000427' Biased in favor of strain: 'B73' |
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| GRMZM2G420121 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.77 x 10-13 | 722 | 165 | 312 | 355 | 81.40% | 53.22% | 887 | 667 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-20' χ2 p-value for Mo17 x B73: '1.77e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G420119 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.639186 x 10-1 | 71 | 80 | 35 | 76 | 47.02% | 68.47% | 151 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4639186' χ2 p-value for Mo17 x B73: '.0000996' Biased in favor of strain: '' |
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| GRMZM2G420119 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.108022 x 10-1 | 318 | 135 | 180 | 229 | 70.20% | 55.99% | 453 | 409 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1108022' χ2 p-value for Mo17 x B73: '4.64e-06' Biased in favor of strain: '' |
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| GRMZM2G420108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 25 | 10 | 5 | 3 | 71.43% | 37.50% | 35 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0112299' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G420108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.992689 x 10-1 | 58 | 23 | 22 | 35 | 71.60% | 61.40% | 81 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457988' χ2 p-value for Mo17 x B73: '.3992689' Biased in favor of strain: '' |
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| GRMZM2G420055 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 6 | 4 | 1 | 60.00% | 20.00% | 15 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G420055 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 1 | 25.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G419994 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.25359 x 10-2 | 328 | 374 | 94 | 128 | 46.72% | 57.66% | 702 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0825359' χ2 p-value for Mo17 x B73: '.0224934' Biased in favor of strain: '' |
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| GRMZM2G419994 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.27411 x 10-2 | 146 | 22 | 64 | 85 | 86.90% | 57.05% | 168 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.63e-08' χ2 p-value for Mo17 x B73: '.0127411' Biased in favor of strain: '' |
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| GRMZM2G419969 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.75 x 10-5 | 185 | 73 | 181 | 108 | 71.71% | 37.37% | 258 | 289 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.11e-12' χ2 p-value for Mo17 x B73: '.0000175' Biased in favor of strain: 'B73' |
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| GRMZM2G419969 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.04147 x 10-2 | 112 | 39 | 50 | 161 | 74.17% | 76.30% | 151 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0504147' χ2 p-value for Mo17 x B73: '.0029835' Biased in favor of strain: '' |
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| GRMZM2G419953 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 4 | 0 | 9 | 63.64% | 100.00% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G419953 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.267995 x 10-1 | 16 | 3 | 6 | 7 | 84.21% | 53.85% | 19 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1047608' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: '' |
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| GRMZM2G419938 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.414806 x 10-1 | 12 | 13 | 16 | 11 | 48.00% | 40.74% | 25 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8414806' χ2 p-value for Mo17 x B73: '.3359238' Biased in favor of strain: '' |
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| GRMZM2G419938 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.02016 x 10-1 | 13 | 10 | 13 | 44 | 56.52% | 77.19% | 23 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.302016' χ2 p-value for Mo17 x B73: '.0918239' Biased in favor of strain: '' |
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| GRMZM2G419852 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G419852 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 6 | 0 | 100.00% | 0.00% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G419836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 13 | 4 | 3 | 6 | 76.47% | 66.67% | 17 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G419836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G419806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.34478 x 10-2 | 34 | 13 | 27 | 16 | 72.34% | 37.21% | 47 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021901' χ2 p-value for Mo17 x B73: '.0934478' Biased in favor of strain: '' |
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| GRMZM2G419806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 5 | 0 | 50.00% | 0.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G419739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.24 x 10-13 | 81 | 0 | 51 | 0 | 100.00% | 0.00% | 81 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.26e-19' χ2 p-value for Mo17 x B73: '9.24e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G419739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.75 x 10-19 | 163 | 0 | 114 | 1 | 100.00% | 0.87% | 163 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.75e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G419694 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.827203 x 10-1 | 196 | 129 | 165 | 178 | 60.31% | 51.90% | 325 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000202' χ2 p-value for Mo17 x B73: '.4827203' Biased in favor of strain: '' |
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| GRMZM2G419694 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.33 x 10-21 | 505 | 91 | 283 | 190 | 84.73% | 40.17% | 596 | 473 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.33e-21' χ2 p-value for Mo17 x B73: '2.29e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G419606 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G419606 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 7 | 1 | 100.00% | 12.50% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: '' |
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| GRMZM2G419473 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 8 | 50.00% | 80.00% | 4 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: '' |
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| GRMZM2G419473 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G419409 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-11 | 25 | 100 | 18 | 95 | 20.00% | 84.07% | 125 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.97e-11' χ2 p-value for Mo17 x B73: '4.37e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G419409 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999997 x 10-1 | 18 | 20 | 15 | 30 | 47.37% | 66.67% | 38 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116156' χ2 p-value for Mo17 x B73: '.9999997' Biased in favor of strain: '' |
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| GRMZM2G419328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 0 | 6 | 50.00% | 100.00% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G419328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G419290 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.394119 x 10-1 | 22 | 19 | 33 | 25 | 53.66% | 43.10% | 41 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6394119' χ2 p-value for Mo17 x B73: '.2935106' Biased in favor of strain: '' |
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| GRMZM2G419290 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 3 | 4 | 4 | 84.21% | 50.00% | 19 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1047608' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G419267 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.109752 x 10-1 | 95 | 84 | 107 | 93 | 53.07% | 46.50% | 179 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4109752' χ2 p-value for Mo17 x B73: '.3221988' Biased in favor of strain: '' |
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| GRMZM2G419267 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.319976 x 10-1 | 15 | 17 | 15 | 20 | 46.88% | 57.14% | 32 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0175473' χ2 p-value for Mo17 x B73: '.2319976' Biased in favor of strain: '' |
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| GRMZM2G419257 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 9 | 5 | 85.71% | 35.71% | 7 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G419257 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G419111 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2 x 10-27 | 910 | 467 | 916 | 509 | 66.09% | 35.72% | 1377 | 1425 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.49e-33' χ2 p-value for Mo17 x B73: '4.20e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G419111 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.81 x 10-11 | 329 | 71 | 185 | 86 | 82.25% | 31.73% | 400 | 271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.81e-11' χ2 p-value for Mo17 x B73: '3.15e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G419085 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.449128 x 10-1 | 299 | 243 | 255 | 289 | 55.17% | 53.12% | 542 | 544 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0161545' χ2 p-value for Mo17 x B73: '.1449128' Biased in favor of strain: '' |
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| GRMZM2G419085 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.04 x 10-6 | 406 | 288 | 228 | 648 | 58.50% | 73.97% | 694 | 876 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.04e-06' χ2 p-value for Mo17 x B73: '4.50e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G419024 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 12 | 0.00% | 100.00% | 7 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G419024 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 14 | 0.00% | 100.00% | 4 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |