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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G20210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.39265'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.31549 x 10-1 1216 349 77.70% 1565 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.68812 x 10-1 654 211 75.61% 865 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.142967'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20170 GALS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 4 5 4 75.00% 44.44% 16 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.3579'
Avg. expression score for this sample: '46.4693'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'pure endosperm, no chalazal'
AT4G20170 GALS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7986 x 10-1 21 4 14 37 84.00% 72.55% 25 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.3579'
Avg. expression score for this sample: '74.2278'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'full endosperm'
AT4G20170 GALS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 2 2 42.86% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '46.1647'
Avg. embryo expression (LCM): '23.9743'
AT4G20170 GALS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20170 GALS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.87423 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20170 GALS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-5 80 4 95.24% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.90447 x 10-1 8 5 16 26 61.54% 61.90% 13 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719086'
Avg. expression score for this sample: '33.4138'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'pure endosperm, no chalazal'
AT4G20160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 13 21 46 59.38% 68.66% 32 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719086'
Avg. expression score for this sample: '50.9008'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'full endosperm'
AT4G20160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '3.0438'
Avg. embryo expression (LCM): '0'
AT4G20160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.05324 x 10-1 85 36 70.25% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 31 17 64.58% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1848.74'
Avg. expression score in LCM sample: '610.199'
Tissue used: 'pure endosperm, no chalazal'
AT4G20150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2526.64'
Avg. expression score in LCM sample: '610.199'
Tissue used: 'full endosperm'
AT4G20150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1936.67'
Avg. embryo expression (LCM): '1322.07'
AT4G20150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20140 GSO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.45442 x 10-1 36 24 12 14 60.00% 53.85% 60 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.237747'
Avg. expression score for this sample: '34.6679'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'pure endosperm, no chalazal'
AT4G20140 GSO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84207 x 10-1 63 44 37 76 58.88% 67.26% 107 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.237747'
Avg. expression score for this sample: '51.7596'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'full endosperm'
AT4G20140 GSO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.62262 x 10-1 109 134 20 29 44.86% 59.18% 243 49 TAIR8 Avg. embryo expression (dissected): '178.304'
Avg. embryo expression (LCM): '131.049'
AT4G20140 GSO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.40445 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20140 GSO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.34869 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20140 GSO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8683 x 10-2 29 8 78.38% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20130 PTAC14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.9228'
Avg. expression score in LCM sample: '5.14427'
Tissue used: 'pure endosperm, no chalazal'
AT4G20130 PTAC14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.3551'
Avg. expression score in LCM sample: '5.14427'
Tissue used: 'full endosperm'
AT4G20130 PTAC14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '92.53'
Avg. embryo expression (LCM): '117.159'
AT4G20130 PTAC14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20130 PTAC14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20130 PTAC14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20115 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20115 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20115 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20115 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20110 VSR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087683'
Avg. expression score for this sample: '.552001'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20110 VSR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7826 x 10-2 11 0 0 2 100.00% 100.00% 11 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087683'
Avg. expression score for this sample: '2.32428'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20110 VSR7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20110 VSR7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20110 VSR7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20110 VSR7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.55172 x 10-1 98 0 100.00% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.819757'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '2.78421'
Avg. expression score in LCM sample: '1.21993'
Tissue used: 'pure endosperm, no chalazal'
AT4G20095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 3 3 4 57.14% 57.14% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '8.78629'
Avg. expression score in LCM sample: '1.21993'
Tissue used: 'full endosperm'
AT4G20095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.615746'
Avg. embryo expression (LCM): '0'
AT4G20095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20090 EMB1025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.78988 x 10-1 21 3 17 9 87.50% 34.62% 24 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.247826'
Avg. expression score for this sample: '102.836'
Avg. expression score in LCM sample: '63.7743'
Tissue used: 'pure endosperm, no chalazal'
AT4G20090 EMB1025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.13585 x 10-1 23 5 18 6 82.14% 25.00% 28 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.247826'
Avg. expression score for this sample: '124.289'
Avg. expression score in LCM sample: '63.7743'
Tissue used: 'full endosperm'
AT4G20090 EMB1025 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.711 x 10-3 32 5 7 7 86.49% 50.00% 37 14 TAIR8 Avg. embryo expression (dissected): '169.186'
Avg. embryo expression (LCM): '176.147'
AT4G20090 EMB1025 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.00224 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20090 EMB1025 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.15 x 10-3 52 90 36.62% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20090 EMB1025 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-9 108 10 91.53% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.663761'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.544964'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.320326'
Avg. embryo expression (LCM): '0'
AT4G20080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20070 AAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9275 x 10-2 208 93 193 256 69.10% 57.02% 301 449 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.935492'
Avg. expression score for this sample: '567.95'
Avg. expression score in LCM sample: '259.183'
Tissue used: 'pure endosperm, no chalazal'
AT4G20070 AAH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8959 x 10-2 252 77 97 196 76.60% 66.89% 329 293 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.935492'
Avg. expression score for this sample: '379.511'
Avg. expression score in LCM sample: '259.183'
Tissue used: 'full endosperm'
AT4G20070 AAH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.06415 x 10-1 38 29 62 23 56.72% 27.06% 67 85 TAIR8 Avg. embryo expression (dissected): '238.462'
Avg. embryo expression (LCM): '82.535'
AT4G20070 AAH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5262 x 10-2 29 5 85.29% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20070 AAH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-6 24 42 36.36% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20070 AAH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-5 193 50 79.42% 243 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20060 EMB1895 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.07718'
Avg. expression score in LCM sample: '4.76212'
Tissue used: 'pure endosperm, no chalazal'
AT4G20060 EMB1895 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 4 100.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.82261'
Avg. expression score in LCM sample: '4.76212'
Tissue used: 'full endosperm'
AT4G20060 EMB1895 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '7.21428'
Avg. embryo expression (LCM): '11.0892'
AT4G20060 EMB1895 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20060 EMB1895 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20060 EMB1895 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20050 QRT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.4835'
Avg. expression score in LCM sample: '153.872'
Tissue used: 'pure endosperm, no chalazal'
AT4G20050 QRT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.8392'
Avg. expression score in LCM sample: '153.872'
Tissue used: 'full endosperm'
AT4G20050 QRT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.84008'
Avg. embryo expression (LCM): '7.84911'
AT4G20050 QRT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20050 QRT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20050 QRT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 239 43 105 58 84.75% 35.58% 282 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303865'
Avg. expression score for this sample: '107.547'
Avg. expression score in LCM sample: '65.9202'
Tissue used: 'pure endosperm, no chalazal'
AT4G20040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.53507 x 10-1 239 35 178 116 87.23% 39.46% 274 294 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303865'
Avg. expression score for this sample: '131.141'
Avg. expression score in LCM sample: '65.9202'
Tissue used: 'full endosperm'