Displaying data sets 52201 - 52300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G20910 HEN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.13677 x 10-1 6 10 5 18 37.50% 78.26% 16 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.68847'
Avg. expression score for this sample: '35.1809'
Avg. expression score in LCM sample: '28.7785'
Tissue used: 'pure endosperm, no chalazal'
AT4G20910 HEN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.1622 x 10-1 23 11 13 43 67.65% 76.79% 34 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.68847'
Avg. expression score for this sample: '57.3493'
Avg. expression score in LCM sample: '28.7785'
Tissue used: 'full endosperm'
AT4G20910 HEN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.78317 x 10-1 18 35 1 9 33.96% 90.00% 53 10 TAIR8 Avg. embryo expression (dissected): '83.6688'
Avg. embryo expression (LCM): '99.9537'
AT4G20910 HEN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.5034 x 10-2 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20910 HEN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.34039 x 10-1 51 14 78.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20910 HEN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 50 21 70.42% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20900 MS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.91736'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20900 MS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.75001'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20900 MS5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.81048'
Avg. embryo expression (LCM): '0'
AT4G20900 MS5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20900 MS5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20900 MS5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20890 TUB9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.62947 x 10-1 56 28 18 76 66.67% 80.85% 84 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '293.363'
Avg. expression score in LCM sample: '293.958'
Tissue used: 'pure endosperm, no chalazal'
AT4G20890 TUB9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.41 x 10-4 175 74 156 507 70.28% 76.47% 249 663 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '440.944'
Avg. expression score in LCM sample: '293.958'
Tissue used: 'full endosperm'
AT4G20890 TUB9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 40 38 13 12 51.28% 48.00% 78 25 TAIR8 Avg. embryo expression (dissected): '214.051'
Avg. embryo expression (LCM): '159.77'
AT4G20890 TUB9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.15524 x 10-1 78 28 73.58% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20890 TUB9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.58 x 10-4 933 219 80.99% 1152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20890 TUB9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8 x 10-7 792 154 83.72% 946 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14147 x 10-1 33 33 20 48 50.00% 70.59% 66 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367421'
Avg. expression score for this sample: '2926.26'
Avg. expression score in LCM sample: '329.042'
Tissue used: 'pure endosperm, no chalazal'
AT4G20880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9407 x 10-2 122 57 60 181 68.16% 75.10% 179 241 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367421'
Avg. expression score for this sample: '1646.42'
Avg. expression score in LCM sample: '329.042'
Tissue used: 'full endosperm'
AT4G20880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 15 10 11 50.00% 52.38% 30 21 TAIR8 Avg. embryo expression (dissected): '1796.23'
Avg. embryo expression (LCM): '358.711'
AT4G20880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.85698 x 10-1 43 13 76.79% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.776 x 10-3 163 39 80.69% 202 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5415 x 10-2 149 42 78.01% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20870 FAH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.67574 x 10-1 544 155 273 326 77.83% 54.42% 699 599 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.059976'
Avg. expression score for this sample: '256.913'
Avg. expression score in LCM sample: '261.74'
Tissue used: 'pure endosperm, no chalazal'
AT4G20870 FAH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7161 x 10-2 437 197 249 641 68.93% 72.02% 634 890 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.059976'
Avg. expression score for this sample: '191.431'
Avg. expression score in LCM sample: '261.74'
Tissue used: 'full endosperm'
AT4G20870 FAH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2476 x 10-2 374 273 141 150 57.81% 51.55% 647 291 TAIR8 Avg. embryo expression (dissected): '292.624'
Avg. embryo expression (LCM): '184.649'
AT4G20870 FAH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5938 x 10-2 141 41 77.47% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20870 FAH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.39674 x 10-1 2248 1054 68.08% 3302 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20870 FAH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-11 1411 398 78.00% 1809 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.994 x 10-3 53 1 12 27 98.15% 69.23% 54 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-24'
Avg. expression score for this sample: '48.7546'
Avg. expression score in LCM sample: '9.55365'
Tissue used: 'pure endosperm, no chalazal'
AT4G20860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1 x 10-23 101 1 29 299 99.02% 91.16% 102 328 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-24'
Avg. expression score for this sample: '80.2588'
Avg. expression score in LCM sample: '9.55365'
Tissue used: 'full endosperm'
AT4G20860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.865 x 10-2 8 1 0 2 88.89% 100.00% 9 2 TAIR8 Avg. embryo expression (dissected): '8.66678'
Avg. embryo expression (LCM): '0'
AT4G20860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.069 x 10-3 31 9 77.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.93 x 10-4 1681 274 85.98% 1955 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-14 1000 7 99.30% 1007 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20850 TPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.6938 x 10-1 146 70 73 160 67.59% 68.67% 216 233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017191'
Avg. expression score for this sample: '259.631'
Avg. expression score in LCM sample: '109.132'
Tissue used: 'pure endosperm, no chalazal'
AT4G20850 TPP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3114 x 10-2 444 183 184 467 70.81% 71.74% 627 651 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017191'
Avg. expression score for this sample: '450.343'
Avg. expression score in LCM sample: '109.132'
Tissue used: 'full endosperm'
AT4G20850 TPP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.83413 x 10-1 228 186 65 69 55.07% 51.49% 414 134 TAIR8 Avg. embryo expression (dissected): '450.946'
Avg. embryo expression (LCM): '246.349'
AT4G20850 TPP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.0011 x 10-2 108 31 77.70% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20850 TPP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7072 x 10-2 409 138 74.77% 547 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20850 TPP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-25 605 71 89.50% 676 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040741'
Avg. expression score for this sample: '3.33858'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'pure endosperm, no chalazal'
AT4G20840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7826 x 10-2 10 0 0 3 100.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040741'
Avg. expression score for this sample: '23.6216'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'full endosperm'
AT4G20840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '1.07593'
Avg. embryo expression (LCM): '0'
AT4G20840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.6667 x 10-2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2059 x 10-2 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.4879 x 10-1 45 11 16 18 80.36% 52.94% 56 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.932498'
Avg. expression score for this sample: '85.2077'
Avg. expression score in LCM sample: '128.871'
Tissue used: 'pure endosperm, no chalazal'
AT4G20830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.89631 x 10-1 83 35 44 60 70.34% 57.69% 118 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.932498'
Avg. expression score for this sample: '108.501'
Avg. expression score in LCM sample: '128.871'
Tissue used: 'full endosperm'
AT4G20830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 17 3 6 43.33% 66.67% 30 9 TAIR8 Avg. embryo expression (dissected): '54.2227'
Avg. embryo expression (LCM): '35.0133'
AT4G20830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.791 x 10-3 5 11 31.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6223 x 10-2 465 318 59.39% 783 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-21 1118 132 89.44% 1250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.4 x 10-6 17 0 0 37 100.00% 100.00% 17 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-32'
Avg. expression score for this sample: '15.247'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-27 13 1 2 252 92.86% 99.21% 14 254 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-32'
Avg. expression score for this sample: '66.1732'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Avg. embryo expression (dissected): '2.77181'
Avg. embryo expression (LCM): '0'
AT4G20820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 521 4 99.24% 525 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.48475 x 10-1 502 7 98.62% 509 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.419155'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.0666'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'pure endosperm, no chalazal'
AT4G20800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.212606'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'full endosperm'
AT4G20800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G20800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 87 71 55.06% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 9 59.09% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.49469'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.16352'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.665439'
Avg. embryo expression (LCM): '0'
AT4G20790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20780 CML42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.327059'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G20780 CML42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.461551'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G20780 CML42 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.48123'
Avg. embryo expression (LCM): '3.20244'
AT4G20780 CML42 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20780 CML42 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20780 CML42 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.7778'
Avg. expression score in LCM sample: '25.1334'
Tissue used: 'pure endosperm, no chalazal'
AT4G20770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.77713 x 10-1 3 5 2 4 37.50% 66.67% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.7991'
Avg. expression score in LCM sample: '25.1334'
Tissue used: 'full endosperm'
AT4G20770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 5 0 0 50.00% 10 0 TAIR8 Avg. embryo expression (dissected): '48.7829'
Avg. embryo expression (LCM): '77.4362'
AT4G20770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2105 x 10-2 1 7 12.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.63 x 10-4 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.96683'
Avg. expression score in LCM sample: '3.83616'
Tissue used: 'pure endosperm, no chalazal'
AT4G20760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.991'
Avg. expression score in LCM sample: '3.83616'
Tissue used: 'full endosperm'
AT4G20760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 4 0 0 42.86% 7 0 TAIR8 Avg. embryo expression (dissected): '25.1859'
Avg. embryo expression (LCM): '29.5378'
AT4G20760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G20740 EMB3131 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.5956'
Avg. expression score in LCM sample: '55.8815'
Tissue used: 'pure endosperm, no chalazal'
AT4G20740 EMB3131 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '92.9455'
Avg. expression score in LCM sample: '55.8815'
Tissue used: 'full endosperm'
AT4G20740 EMB3131 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '86.6028'
Avg. embryo expression (LCM): '111.03'
AT4G20740 EMB3131 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'