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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G21810 DER2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.80925 x 10-1 714 95 436 363 88.26% 45.43% 809 799 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-14'
Avg. expression score for this sample: '708.068'
Avg. expression score in LCM sample: '581.641'
Tissue used: 'pure endosperm, no chalazal'
AT4G21810 DER2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-24 1053 126 329 754 89.31% 69.62% 1179 1083 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-14'
Avg. expression score for this sample: '640.393'
Avg. expression score in LCM sample: '581.641'
Tissue used: 'full endosperm'
AT4G21810 DER2.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2616 x 10-2 290 116 139 53 71.43% 27.60% 406 192 TAIR8 Avg. embryo expression (dissected): '411.547'
Avg. embryo expression (LCM): '177.114'
AT4G21810 DER2.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.355 x 10-3 284 137 67.46% 421 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21810 DER2.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-15 613 382 61.61% 995 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21810 DER2.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1522 125 92.41% 1647 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21800 QQT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.0798 x 10-2 555 244 266 658 69.46% 71.21% 799 924 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-29'
Avg. expression score for this sample: '753.617'
Avg. expression score in LCM sample: '205.727'
Tissue used: 'pure endosperm, no chalazal'
AT4G21800 QQT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 873 321 340 1776 73.12% 83.93% 1194 2116 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-29'
Avg. expression score for this sample: '929.574'
Avg. expression score in LCM sample: '205.727'
Tissue used: 'full endosperm'
AT4G21800 QQT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.59539 x 10-1 431 469 62 84 47.89% 57.53% 900 146 TAIR8 Avg. embryo expression (dissected): '601.063'
Avg. embryo expression (LCM): '571.754'
AT4G21800 QQT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.40103 x 10-1 218 81 72.91% 299 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21800 QQT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-7 2272 505 81.81% 2777 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21800 QQT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.69782 x 10-1 1361 401 77.24% 1762 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21790 TOM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 4 6 100.00% 60.00% 6 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.207852'
Avg. expression score for this sample: '114.165'
Avg. expression score in LCM sample: '58.3801'
Tissue used: 'pure endosperm, no chalazal'
AT4G21790 TOM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.82509 x 10-1 41 10 17 40 80.39% 70.18% 51 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.207852'
Avg. expression score for this sample: '185.516'
Avg. expression score in LCM sample: '58.3801'
Tissue used: 'full endosperm'
AT4G21790 TOM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.95534 x 10-1 12 4 1 1 75.00% 50.00% 16 2 TAIR8 Avg. embryo expression (dissected): '133.252'
Avg. embryo expression (LCM): '113.115'
AT4G21790 TOM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.4647 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21790 TOM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21790 TOM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.20413 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.90847'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G21780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.317975'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G21780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G21780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 8 4 13 57.89% 76.47% 19 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.3299'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'pure endosperm, no chalazal'
AT4G21770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 8 15 85.71% 65.22% 7 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.8769'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'full endosperm'
AT4G21770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.78772 x 10-1 39 45 12 8 46.43% 40.00% 84 20 TAIR8 Avg. embryo expression (dissected): '98.8376'
Avg. embryo expression (LCM): '109.762'
AT4G21770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.56269 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.02426 x 10-1 19 7 73.08% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8659 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21760 BGLU47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.7817'
Avg. expression score in LCM sample: '4.74743'
Tissue used: 'pure endosperm, no chalazal'
AT4G21760 BGLU47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.5033'
Avg. expression score in LCM sample: '4.74743'
Tissue used: 'full endosperm'
AT4G21760 BGLU47 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '100.521'
Avg. embryo expression (LCM): '81.0279'
AT4G21760 BGLU47 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21760 BGLU47 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21760 BGLU47 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.7619 x 10-2 60 0 100.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21750 ATML1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.01846 x 10-1 43 13 10 27 76.79% 72.97% 56 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000707'
Avg. expression score for this sample: '100.072'
Avg. expression score in LCM sample: '16.4617'
Tissue used: 'pure endosperm, no chalazal'
AT4G21750 ATML1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.113 x 10-3 189 70 85 271 72.97% 76.12% 259 356 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000707'
Avg. expression score for this sample: '213.572'
Avg. expression score in LCM sample: '16.4617'
Tissue used: 'full endosperm'
AT4G21750 ATML1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.9579 x 10-1 98 85 36 36 53.55% 50.00% 183 72 TAIR8 Avg. embryo expression (dissected): '387.561'
Avg. embryo expression (LCM): '315.886'
AT4G21750 ATML1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0686 x 10-1 49 10 83.05% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21750 ATML1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2668 x 10-2 991 433 69.59% 1424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21750 ATML1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.21863 x 10-1 840 236 78.07% 1076 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G21745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G21745 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.572062'
Avg. embryo expression (LCM): '1.2433'
AT4G21745 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21745 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21745 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7011 x 10-1 17 14 12 11 54.84% 47.83% 31 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391211'
Avg. expression score for this sample: '110.825'
Avg. expression score in LCM sample: '43.4029'
Tissue used: 'pure endosperm, no chalazal'
AT4G21740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 58 23 23 32 71.60% 58.18% 81 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391211'
Avg. expression score for this sample: '122.579'
Avg. expression score in LCM sample: '43.4029'
Tissue used: 'full endosperm'
AT4G21740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.30801 x 10-1 18 26 4 3 40.91% 42.86% 44 7 TAIR8 Avg. embryo expression (dissected): '106.403'
Avg. embryo expression (LCM): '29.6634'
AT4G21740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.46059 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7717 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.31 x 10-4 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.675 x 10-3 101 18 29 87 84.87% 75.00% 119 116 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000028'
Avg. expression score for this sample: '210.158'
Avg. expression score in LCM sample: '51.9865'
Tissue used: 'pure endosperm, no chalazal'
AT4G21720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.093 x 10-2 79 12 24 58 86.81% 70.73% 91 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000028'
Avg. expression score for this sample: '119.984'
Avg. expression score in LCM sample: '51.9865'
Tissue used: 'full endosperm'
AT4G21720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.26972 x 10-1 74 82 56 45 47.44% 44.55% 156 101 TAIR8 Avg. embryo expression (dissected): '358.134'
Avg. embryo expression (LCM): '130.182'
AT4G21720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.58251 x 10-1 141 25 84.94% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.684 x 10-3 215 30 87.76% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21710 NRPB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '133.001'
Avg. expression score in LCM sample: '70.5794'
Tissue used: 'pure endosperm, no chalazal'
AT4G21710 NRPB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '147.442'
Avg. expression score in LCM sample: '70.5794'
Tissue used: 'full endosperm'
AT4G21710 NRPB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '157.237'
Avg. embryo expression (LCM): '111.294'
AT4G21710 NRPB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21710 NRPB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21710 NRPB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 27 12 15 27 69.23% 64.29% 39 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.41955'
Avg. expression score for this sample: '104.595'
Avg. expression score in LCM sample: '72.1374'
Tissue used: 'pure endosperm, no chalazal'
AT4G21705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.38011 x 10-1 53 25 34 94 67.95% 73.44% 78 128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.41955'
Avg. expression score for this sample: '198.957'
Avg. expression score in LCM sample: '72.1374'
Tissue used: 'full endosperm'
AT4G21705 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.41824 x 10-1 59 69 10 10 46.09% 50.00% 128 20 TAIR8 Avg. embryo expression (dissected): '222.629'
Avg. embryo expression (LCM): '266.857'
AT4G21705 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.13953 x 10-1 15 7 68.18% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21705 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.423 x 10-3 102 20 83.61% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21705 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9 x 10-6 121 15 88.97% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3372 x 10-2 57 18 14 53 76.00% 79.10% 75 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-07'
Avg. expression score for this sample: '76.0858'
Avg. expression score in LCM sample: '59.0415'
Tissue used: 'pure endosperm, no chalazal'
AT4G21700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9 x 10-6 200 40 62 207 83.33% 76.95% 240 269 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-07'
Avg. expression score for this sample: '183.377'
Avg. expression score in LCM sample: '59.0415'
Tissue used: 'full endosperm'
AT4G21700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.38802 x 10-1 25 28 10 8 47.17% 44.44% 53 18 TAIR8 Avg. embryo expression (dissected): '47.7148'
Avg. embryo expression (LCM): '40.0116'
AT4G21700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 26 6 81.25% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2861 x 10-2 196 77 71.79% 273 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-9 385 33 92.11% 418 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21690 GA3OX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '74.9482'
Avg. expression score in LCM sample: '252.687'
Tissue used: 'pure endosperm, no chalazal'
AT4G21690 GA3OX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.4591'
Avg. expression score in LCM sample: '252.687'
Tissue used: 'full endosperm'
AT4G21690 GA3OX3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.7305'
Avg. embryo expression (LCM): '14.3921'
AT4G21690 GA3OX3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21690 GA3OX3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21690 GA3OX3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21680 NRT1.8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 11 5 26 42.11% 83.87% 19 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005526'
Avg. expression score for this sample: '322.074'
Avg. expression score in LCM sample: '175.655'
Tissue used: 'pure endosperm, no chalazal'
AT4G21680 NRT1.8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.14 x 10-4 17 10 9 92 62.96% 91.09% 27 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005526'
Avg. expression score for this sample: '424.512'
Avg. expression score in LCM sample: '175.655'
Tissue used: 'full endosperm'
AT4G21680 NRT1.8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '22.5518'
Avg. embryo expression (LCM): '3.5164'
AT4G21680 NRT1.8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4733 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21680 NRT1.8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6163 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21680 NRT1.8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-5 54 0 100.00% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21670 CPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.55576 x 10-1 15 9 4 19 62.50% 82.61% 24 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034545'
Avg. expression score for this sample: '62.0069'
Avg. expression score in LCM sample: '46.1662'
Tissue used: 'pure endosperm, no chalazal'
AT4G21670 CPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0901 x 10-2 64 20 8 38 76.19% 82.61% 84 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034545'
Avg. expression score for this sample: '76.3633'
Avg. expression score in LCM sample: '46.1662'
Tissue used: 'full endosperm'
AT4G21670 CPL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 12 12 0 4 50.00% 100.00% 24 4 TAIR8 Avg. embryo expression (dissected): '58.6165'
Avg. embryo expression (LCM): '45.8011'
AT4G21670 CPL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.66188 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21670 CPL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 30 8 78.95% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21670 CPL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9555 x 10-2 46 6 88.46% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G21660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '445.625'
Avg. expression score in LCM sample: '113.012'
Tissue used: 'pure endosperm, no chalazal'
AT4G21660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '423.533'
Avg. expression score in LCM sample: '113.012'
Tissue used: 'full endosperm'
AT4G21660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '526.241'
Avg. embryo expression (LCM): '413.654'
AT4G21660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'