| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G426469 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93464 x 10-2 | 38 | 2 | 13 | 5 | 95.00% | 27.78% | 40 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.25e-08' χ2 p-value for Mo17 x B73: '.0593464' Biased in favor of strain: '' |
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| GRMZM2G426469 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.5 x 10-7 | 55 | 1 | 89 | 21 | 98.21% | 19.09% | 56 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.50e-07' χ2 p-value for Mo17 x B73: '3.50e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G426467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G426467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 1 | 1 | 0.00% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G426415 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.00435 x 10-2 | 87 | 63 | 90 | 123 | 58.00% | 57.75% | 150 | 213 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0500435' χ2 p-value for Mo17 x B73: '.0237517' Biased in favor of strain: '' |
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| GRMZM2G426415 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518293 x 10-1 | 107 | 16 | 28 | 52 | 86.99% | 65.00% | 123 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.74e-06' χ2 p-value for Mo17 x B73: '.7518293' Biased in favor of strain: '' |
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| GRMZM2G426336 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.746 x 10-4 | 84 | 43 | 61 | 24 | 66.14% | 28.24% | 127 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002746' χ2 p-value for Mo17 x B73: '.0000599' Biased in favor of strain: 'B73' |
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| GRMZM2G426336 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 7 | 13 | 0.00% | 65.00% | 5 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.8743669' Biased in favor of strain: '' |
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| GRMZM2G426275 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.482369 x 10-1 | 162 | 137 | 157 | 105 | 54.18% | 40.08% | 299 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1482369' χ2 p-value for Mo17 x B73: '.0013155' Biased in favor of strain: '' |
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| GRMZM2G426275 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.047527 x 10-1 | 87 | 49 | 38 | 87 | 63.97% | 69.60% | 136 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5047527' χ2 p-value for Mo17 x B73: '.4866164' Biased in favor of strain: '' |
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| GRMZM2G426224 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 1 | 28 | 0 | 12 | 3.45% | 100.00% | 29 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.34e-07' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'Mo17' |
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| GRMZM2G426224 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G426213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.747 x 10-4 | 31 | 1 | 16 | 1 | 96.88% | 5.88% | 32 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-07' χ2 p-value for Mo17 x B73: '.0002747' Biased in favor of strain: 'B73' |
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| GRMZM2G426213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53478 x 10-2 | 10 | 0 | 12 | 0 | 100.00% | 0.00% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: '' |
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| GRMZM2G426200 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.61426 x 10-2 | 113 | 149 | 101 | 140 | 43.13% | 58.09% | 262 | 241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0261426' χ2 p-value for Mo17 x B73: '.0119977' Biased in favor of strain: 'Mo17' |
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| GRMZM2G426200 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.865317 x 10-1 | 144 | 82 | 99 | 208 | 63.72% | 67.75% | 226 | 307 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3468098' χ2 p-value for Mo17 x B73: '.6865317' Biased in favor of strain: '' |
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| GRMZM2G426181 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 6 | 0 | 100.00% | 0.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G426181 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 2 | 4 | 50.00% | 66.67% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G426175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 5 | 1 | 6 | 54.55% | 85.71% | 11 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G426175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G426158 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.920615 x 10-1 | 151 | 28 | 453 | 465 | 84.36% | 50.65% | 179 | 918 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.80e-20' χ2 p-value for Mo17 x B73: '.6920615' Biased in favor of strain: '' |
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| GRMZM2G426158 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.091 x 10-3 | 88 | 20 | 449 | 378 | 81.48% | 45.71% | 108 | 827 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001091' χ2 p-value for Mo17 x B73: '1.96e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G426156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6777 x 10-3 | 88 | 48 | 143 | 99 | 64.71% | 40.91% | 136 | 242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006036' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: 'B73' |
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| GRMZM2G426156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.728297 x 10-1 | 21 | 15 | 19 | 35 | 58.33% | 64.81% | 36 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2888298' χ2 p-value for Mo17 x B73: '.7728297' Biased in favor of strain: '' |
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| GRMZM2G426154 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.50792 x 10-1 | 96 | 60 | 62 | 47 | 61.54% | 43.12% | 156 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0039478' χ2 p-value for Mo17 x B73: '.150792' Biased in favor of strain: '' |
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| GRMZM2G426154 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28611 x 10-2 | 161 | 49 | 84 | 118 | 76.67% | 58.42% | 210 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021119' χ2 p-value for Mo17 x B73: '.0128611' Biased in favor of strain: '' |
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| GRMZM2G426108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12701 x 10-2 | 38 | 8 | 31 | 14 | 82.61% | 31.11% | 46 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.72e-06' χ2 p-value for Mo17 x B73: '.0112701' Biased in favor of strain: 'B73' |
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| GRMZM2G426108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.25 x 10-6 | 92 | 13 | 42 | 19 | 87.62% | 31.15% | 105 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.25e-06' χ2 p-value for Mo17 x B73: '3.98e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G426046 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.55105 x 10-2 | 217 | 136 | 147 | 178 | 61.47% | 54.77% | 353 | 325 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000162' χ2 p-value for Mo17 x B73: '.0855105' Biased in favor of strain: '' |
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| GRMZM2G426046 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.742393 x 10-1 | 30 | 9 | 57 | 77 | 76.92% | 57.46% | 39 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1742393' χ2 p-value for Mo17 x B73: '.0238129' Biased in favor of strain: '' |
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| GRMZM2G425999 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 2 | 100.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G425999 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 5 | 75.00% | 100.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G425965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.5 x 10-7 | 161 | 57 | 136 | 65 | 73.85% | 32.34% | 218 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.87e-12' χ2 p-value for Mo17 x B73: '5.50e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G425965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.671 x 10-4 | 90 | 76 | 46 | 192 | 54.22% | 80.67% | 166 | 238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006671' χ2 p-value for Mo17 x B73: '4.57e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G425863 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.617591 x 10-1 | 356 | 273 | 562 | 525 | 56.60% | 48.30% | 629 | 1087 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009349' χ2 p-value for Mo17 x B73: '.2617591' Biased in favor of strain: '' |
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| GRMZM2G425863 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3978 x 10-3 | 478 | 181 | 207 | 269 | 72.53% | 56.51% | 659 | 476 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013978' χ2 p-value for Mo17 x B73: '2.61e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G425798 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.150006 x 10-1 | 17 | 27 | 14 | 16 | 38.64% | 53.33% | 44 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.7150006' Biased in favor of strain: '' |
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| GRMZM2G425798 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13498 x 10-2 | 41 | 64 | 37 | 114 | 39.05% | 75.50% | 105 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.93e-09' χ2 p-value for Mo17 x B73: '.0213498' Biased in favor of strain: '' |
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| GRMZM2G425778 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.171851 x 10-1 | 286 | 200 | 282 | 246 | 58.85% | 46.59% | 486 | 528 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000958' χ2 p-value for Mo17 x B73: '.1171851' Biased in favor of strain: '' |
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| GRMZM2G425778 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733215 x 10-1 | 56 | 4 | 24 | 36 | 93.33% | 60.00% | 60 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000118' χ2 p-value for Mo17 x B73: '.2733215' Biased in favor of strain: '' |
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| GRMZM2G425751 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.85112 x 10-1 | 47 | 35 | 44 | 32 | 57.32% | 42.11% | 82 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.185112' χ2 p-value for Mo17 x B73: '.1686686' Biased in favor of strain: '' |
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| GRMZM2G425751 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985536 x 10-1 | 21 | 9 | 19 | 15 | 70.00% | 44.12% | 30 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985536' χ2 p-value for Mo17 x B73: '.0052845' Biased in favor of strain: '' |
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| GRMZM2G425736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.87 x 10-6 | 147 | 25 | 80 | 30 | 85.47% | 27.27% | 172 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-20' χ2 p-value for Mo17 x B73: '1.87e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G425736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-10 | 149 | 16 | 106 | 40 | 90.30% | 27.40% | 165 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-10' χ2 p-value for Mo17 x B73: '7.85e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G425719 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 10 | 1 | 100.00% | 9.09% | 5 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: '' |
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| GRMZM2G425719 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G425629 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5096 | 1132 | 7009 | 1934 | 81.82% | 21.63% | 6228 | 8943 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G425629 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7281 x 10-3 | 56 | 10 | 62 | 31 | 84.85% | 33.33% | 66 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017281' χ2 p-value for Mo17 x B73: '9.16e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G425430 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.63 x 10-7 | 0 | 24 | 0 | 41 | 0.00% | 100.00% | 24 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '1.52e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G425430 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.115 x 10-4 | 0 | 20 | 0 | 26 | 0.00% | 100.00% | 20 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'Mo17' |
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| GRMZM2G425377 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.830914 x 10-1 | 21 | 9 | 13 | 11 | 70.00% | 45.83% | 30 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284597' χ2 p-value for Mo17 x B73: '.6830914' Biased in favor of strain: '' |
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| GRMZM2G425377 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999804 x 10-1 | 12 | 6 | 6 | 13 | 66.67% | 68.42% | 18 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999804' χ2 p-value for Mo17 x B73: '.8711317' Biased in favor of strain: '' |
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| GRMZM2G425249 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 1 | 33.33% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G425249 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 1 | 3 | 100.00% | 75.00% | 11 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G425236 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.43 x 10-5 | 36 | 7 | 39 | 10 | 83.72% | 20.41% | 43 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.76e-06' χ2 p-value for Mo17 x B73: '.0000343' Biased in favor of strain: 'B73' |
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| GRMZM2G425236 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G425230 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 9 | 6 | 3 | 14 | 60.00% | 82.35% | 15 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0076329' Biased in favor of strain: '' |
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| GRMZM2G425230 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.70999 x 10-2 | 36 | 30 | 25 | 75 | 54.55% | 75.00% | 66 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0367098' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: '' |
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| GRMZM2G425211 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 25 | 25 | 33 | 15 | 50.00% | 31.25% | 50 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G425211 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999735 x 10-1 | 22 | 11 | 11 | 17 | 66.67% | 60.71% | 33 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999735' χ2 p-value for Mo17 x B73: '.5040357' Biased in favor of strain: '' |
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| GRMZM2G425206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.51 x 10-21 | 1543 | 1064 | 2198 | 1534 | 59.19% | 41.10% | 2607 | 3732 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.51e-21' χ2 p-value for Mo17 x B73: '1.62e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G425206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.948864 x 10-1 | 15 | 9 | 5 | 8 | 62.50% | 61.54% | 24 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6649876' χ2 p-value for Mo17 x B73: '.6948864' Biased in favor of strain: '' |
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| GRMZM2G425072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 2 | 6 | 3 | 81.82% | 33.33% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0348085' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G425072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 6 | 3 | 100.00% | 33.33% | 5 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0338948' Biased in favor of strain: '' |
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| GRMZM2G424908 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4786 x 10-3 | 28 | 8 | 30 | 12 | 77.78% | 28.57% | 36 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008581' χ2 p-value for Mo17 x B73: '.0054786' Biased in favor of strain: 'B73' |
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| GRMZM2G424908 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.927029 x 10-1 | 10 | 7 | 6 | 7 | 58.82% | 53.85% | 17 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4927029' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: '' |
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| GRMZM2G424873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.70837 x 10-2 | 240 | 205 | 283 | 171 | 53.93% | 37.67% | 445 | 454 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0970837' χ2 p-value for Mo17 x B73: '1.47e-07' Biased in favor of strain: '' |
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| GRMZM2G424873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.780324 x 10-1 | 266 | 137 | 145 | 276 | 66.00% | 65.56% | 403 | 421 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7780324' χ2 p-value for Mo17 x B73: '.6294701' Biased in favor of strain: '' |
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| GRMZM2G424857 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.19 x 10-7 | 421 | 214 | 296 | 184 | 66.30% | 38.33% | 635 | 480 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.13e-16' χ2 p-value for Mo17 x B73: '3.19e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G424857 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 660 | 76 | 300 | 139 | 89.67% | 31.66% | 736 | 439 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G424832 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.012426 x 10-1 | 53 | 67 | 39 | 64 | 44.17% | 62.14% | 120 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2012426' χ2 p-value for Mo17 x B73: '.0137656' Biased in favor of strain: '' |
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| GRMZM2G424832 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15837 x 10-2 | 57 | 48 | 40 | 126 | 54.29% | 75.90% | 105 | 166 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0071171' χ2 p-value for Mo17 x B73: '.0115837' Biased in favor of strain: '' |
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| GRMZM2G424804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 12 | 0 | 0 | 40.00% | 20 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710934' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G424804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G424783 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.093553 x 10-1 | 49 | 67 | 55 | 64 | 42.24% | 53.78% | 116 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0946707' χ2 p-value for Mo17 x B73: '.4093553' Biased in favor of strain: '' |
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| GRMZM2G424783 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.61747 x 10-1 | 145 | 73 | 83 | 122 | 66.51% | 59.51% | 218 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.961747' χ2 p-value for Mo17 x B73: '.0297799' Biased in favor of strain: '' |
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| GRMZM2G424595 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.822055 x 10-1 | 649 | 558 | 431 | 400 | 53.77% | 48.13% | 1207 | 831 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0088107' χ2 p-value for Mo17 x B73: '.2822055' Biased in favor of strain: '' |
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| GRMZM2G424595 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 8.55 x 10-10 | 326 | 279 | 373 | 491 | 53.88% | 56.83% | 605 | 864 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.56e-11' χ2 p-value for Mo17 x B73: '8.55e-10' Biased in favor of strain: '' |
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| GRMZM2G424582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.837099 x 10-1 | 872 | 836 | 761 | 679 | 51.05% | 47.15% | 1708 | 1440 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3837099' χ2 p-value for Mo17 x B73: '.0307039' Biased in favor of strain: '' |
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| GRMZM2G424582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.03 x 10-11 | 702 | 210 | 489 | 598 | 76.97% | 55.01% | 912 | 1087 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.03e-11' χ2 p-value for Mo17 x B73: '3.64e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G424509 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G424509 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572991 x 10-1 | 3 | 7 | 8 | 8 | 30.00% | 50.00% | 10 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0139054' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G424491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.37 x 10-7 | 278 | 147 | 264 | 156 | 65.41% | 37.14% | 425 | 420 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-10' χ2 p-value for Mo17 x B73: '1.37e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G424491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1989 x 10-3 | 129 | 30 | 57 | 71 | 81.13% | 55.47% | 159 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001092' χ2 p-value for Mo17 x B73: '.0071989' Biased in favor of strain: 'B73' |
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| GRMZM2G424241 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9163 x 10-2 | 792 | 866 | 776 | 851 | 47.77% | 52.30% | 1658 | 1627 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.069163' χ2 p-value for Mo17 x B73: '.0629737' Biased in favor of strain: '' |
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| GRMZM2G424241 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 8.4129 x 10-3 | 1496 | 863 | 874 | 1564 | 63.42% | 64.15% | 2359 | 2438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008118' χ2 p-value for Mo17 x B73: '.0084129' Biased in favor of strain: '' |
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| GRMZM2G424205 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.076259 x 10-1 | 111 | 99 | 44 | 140 | 52.86% | 76.09% | 210 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4076259' χ2 p-value for Mo17 x B73: '1.47e-12' Biased in favor of strain: '' |
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| GRMZM2G424205 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.54 x 10-8 | 190 | 0 | 0 | 64 | 100.00% | 100.00% | 190 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.90e-22' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: '' |
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| GRMZM2G424181 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.554 x 10-4 | 483 | 382 | 377 | 290 | 55.84% | 43.48% | 865 | 667 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005945' χ2 p-value for Mo17 x B73: '.0007554' Biased in favor of strain: 'B73' |
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| GRMZM2G424181 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.29712 x 10-2 | 258 | 103 | 137 | 197 | 71.47% | 58.98% | 361 | 334 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0529712' χ2 p-value for Mo17 x B73: '.0028898' Biased in favor of strain: '' |
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| GRMZM2G424112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655179 x 10-1 | 4 | 9 | 15 | 6 | 30.77% | 28.57% | 13 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0495346' Biased in favor of strain: '' |
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| GRMZM2G424112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.46355 x 10-1 | 5 | 5 | 14 | 24 | 50.00% | 63.16% | 10 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2635445' χ2 p-value for Mo17 x B73: '.646355' Biased in favor of strain: '' |
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| GRMZM2G424053 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.958831 x 10-1 | 328 | 236 | 250 | 262 | 58.16% | 51.17% | 564 | 512 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001071' χ2 p-value for Mo17 x B73: '.5958831' Biased in favor of strain: '' |
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| GRMZM2G424053 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1355 x 10-3 | 322 | 113 | 317 | 287 | 74.02% | 47.52% | 435 | 604 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011355' χ2 p-value for Mo17 x B73: '1.79e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G423930 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.8621 x 10-3 | 91 | 58 | 84 | 46 | 61.07% | 35.38% | 149 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0068621' χ2 p-value for Mo17 x B73: '.0008597' Biased in favor of strain: 'B73' |
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| GRMZM2G423930 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G423900 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655179 x 10-1 | 4 | 9 | 6 | 17 | 30.77% | 73.91% | 13 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0218101' Biased in favor of strain: '' |
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| GRMZM2G423900 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G423886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.371829 x 10-1 | 86 | 73 | 81 | 80 | 54.09% | 49.69% | 159 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3025563' χ2 p-value for Mo17 x B73: '.9371829' Biased in favor of strain: '' |
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| GRMZM2G423886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.76363 x 10-2 | 13 | 1 | 15 | 2 | 92.86% | 11.76% | 14 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '1.57e-06' Biased in favor of strain: '' |