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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G23100 GSH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.34 x 10-3 283 135 99 340 67.70% 77.45% 418 439 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-25'
Avg. expression score for this sample: '275.185'
Avg. expression score in LCM sample: '194.63'
Tissue used: 'pure endosperm, no chalazal'
AT4G23100 GSH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5 x 10-27 851 164 253 921 83.84% 78.45% 1015 1174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-25'
Avg. expression score for this sample: '443.469'
Avg. expression score in LCM sample: '194.63'
Tissue used: 'full endosperm'
AT4G23100 GSH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05735 x 10-1 217 209 37 42 50.94% 53.16% 426 79 TAIR8 Avg. embryo expression (dissected): '227.945'
Avg. embryo expression (LCM): '202.633'
AT4G23100 GSH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.1719 x 10-2 208 40 83.87% 248 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23100 GSH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.0 x 10-27 756 51 93.68% 807 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23100 GSH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1983 28 98.61% 2011 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.89458'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.30387'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G23090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.314618'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.443994'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.913416'
Avg. embryo expression (LCM): '0'
AT4G23080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23070 RBL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.4602'
Avg. expression score in LCM sample: '10.9646'
Tissue used: 'pure endosperm, no chalazal'
AT4G23070 RBL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '54.69'
Avg. expression score in LCM sample: '10.9646'
Tissue used: 'full endosperm'
AT4G23070 RBL7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.8408'
Avg. embryo expression (LCM): '6.69372'
AT4G23070 RBL7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23070 RBL7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23070 RBL7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23060 IQD22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.17082 x 10-1 13 1 4 6 92.86% 60.00% 14 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '139.487'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'pure endosperm, no chalazal'
AT4G23060 IQD22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.29223 x 10-1 32 5 9 9 86.49% 50.00% 37 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '138.948'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'full endosperm'
AT4G23060 IQD22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 12 7 2 2 63.16% 50.00% 19 4 TAIR8 Avg. embryo expression (dissected): '289.19'
Avg. embryo expression (LCM): '171.588'
AT4G23060 IQD22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.25 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23060 IQD22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23060 IQD22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.24957 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.743 x 10-2 205 61 81 165 77.07% 67.07% 266 246 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001126'
Avg. expression score for this sample: '97.7598'
Avg. expression score in LCM sample: '69.433'
Tissue used: 'pure endosperm, no chalazal'
AT4G23050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.802 x 10-3 161 36 82 189 81.73% 69.74% 197 271 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001126'
Avg. expression score for this sample: '65.2048'
Avg. expression score in LCM sample: '69.433'
Tissue used: 'full endosperm'
AT4G23050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.03799 x 10-1 114 86 56 62 57.00% 52.54% 200 118 TAIR8 Avg. embryo expression (dissected): '104.388'
Avg. embryo expression (LCM): '55.2829'
AT4G23050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.07371 x 10-1 39 10 79.59% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.693 x 10-3 278 63 81.52% 341 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.325 x 10-3 416 104 80.00% 520 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.97319 x 10-1 22 1 12 22 95.65% 64.71% 23 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.335843'
Avg. expression score for this sample: '36.1174'
Avg. expression score in LCM sample: '61.6871'
Tissue used: 'pure endosperm, no chalazal'
AT4G23040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.54709 x 10-1 20 4 17 27 83.33% 61.36% 24 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.335843'
Avg. expression score for this sample: '31.9434'
Avg. expression score in LCM sample: '61.6871'
Tissue used: 'full endosperm'
AT4G23040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.30319 x 10-1 17 15 4 10 53.12% 71.43% 32 14 TAIR8 Avg. embryo expression (dissected): '50.1943'
Avg. embryo expression (LCM): '38.1404'
AT4G23040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.83715 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.15578 x 10-1 198 92 68.28% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.22615 x 10-1 63 13 82.89% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.19568'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.58868'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.493658'
Avg. embryo expression (LCM): '0'
AT4G23030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23020 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.441 x 10-3 84 29 28 132 74.34% 82.50% 113 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-17'
Avg. expression score for this sample: '101.271'
Avg. expression score in LCM sample: '5.57051'
Tissue used: 'pure endosperm, no chalazal'
AT4G23020 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-15 369 123 49 431 75.00% 89.79% 492 480 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-17'
Avg. expression score for this sample: '261.733'
Avg. expression score in LCM sample: '5.57051'
Tissue used: 'full endosperm'
AT4G23020 TRM11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.02309 x 10-1 37 60 4 17 38.14% 80.95% 97 21 TAIR8 Avg. embryo expression (dissected): '59.9264'
Avg. embryo expression (LCM): '8.57751'
AT4G23020 TRM11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 118 26 81.94% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23020 TRM11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-16 226 2 99.12% 228 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23020 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-15 288 7 97.63% 295 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23010 UTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9245 x 10-1 334 246 231 522 57.59% 69.32% 580 753 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19204'
Avg. expression score for this sample: '1610.53'
Avg. expression score in LCM sample: '807.063'
Tissue used: 'pure endosperm, no chalazal'
AT4G23010 UTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.03112 x 10-1 207 125 134 287 62.35% 68.17% 332 421 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19204'
Avg. expression score for this sample: '1035.6'
Avg. expression score in LCM sample: '807.063'
Tissue used: 'full endosperm'
AT4G23010 UTR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.44542 x 10-1 65 61 15 26 51.59% 63.41% 126 41 TAIR8 Avg. embryo expression (dissected): '274.955'
Avg. embryo expression (LCM): '66.5228'
AT4G23010 UTR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.14355 x 10-1 63 35 64.29% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23010 UTR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3 x 10-5 179 52 77.49% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23010 UTR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-5 139 34 80.35% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.17424'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'pure endosperm, no chalazal'
AT4G23000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 2 1 33.33% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.37396'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'full endosperm'
AT4G23000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.026'
Avg. embryo expression (LCM): '7.87423'
AT4G23000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '79.8926'
Avg. expression score in LCM sample: '42.5211'
Tissue used: 'pure endosperm, no chalazal'
AT4G22990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.084'
Avg. expression score in LCM sample: '42.5211'
Tissue used: 'full endosperm'
AT4G22990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '220.833'
Avg. embryo expression (LCM): '110.013'
AT4G22990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.147789'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G22980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 2 0 100.00% 0.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.13119'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G22980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G22980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22970 ESP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 5 2 4 54.55% 66.67% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.854596'
Avg. expression score for this sample: '16.1567'
Avg. expression score in LCM sample: '18.637'
Tissue used: 'pure endosperm, no chalazal'
AT4G22970 ESP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 5 12 18 72.22% 60.00% 18 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.854596'
Avg. expression score for this sample: '11.8621'
Avg. expression score in LCM sample: '18.637'
Tissue used: 'full endosperm'
AT4G22970 ESP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 7 12 1 3 36.84% 75.00% 19 4 TAIR8 Avg. embryo expression (dissected): '50.0253'
Avg. embryo expression (LCM): '48.5138'
AT4G22970 ESP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0993 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22970 ESP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.8987 x 10-2 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22970 ESP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.46144 x 10-1 16 12 57.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.37136 x 10-1 7 11 5 15 38.89% 75.00% 18 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.8428'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G22960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.85003 x 10-1 9 14 2 32 39.13% 94.12% 23 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.019'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G22960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 6 0 4 0.00% 100.00% 6 4 TAIR8 Avg. embryo expression (dissected): '9.49411'
Avg. embryo expression (LCM): '4.44574'
AT4G22960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.722 x 10-3 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-5 38 1 97.44% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22950 AGL19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G22950 AGL19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.05806'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G22950 AGL19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.424447'
Avg. embryo expression (LCM): '0'
AT4G22950 AGL19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22950 AGL19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22950 AGL19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G22940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 5 50.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '7.91799'
Avg. expression score in LCM sample: '1.07295'
Tissue used: 'pure endosperm, no chalazal'
AT4G22940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 4 1 0 4 80.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '9.82108'
Avg. expression score in LCM sample: '1.07295'
Tissue used: 'full endosperm'
AT4G22940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '7.67209'
Avg. embryo expression (LCM): '5.4881'
AT4G22940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'